Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g00500 TTCCACTCGAGGCCAGTTCCCCGATTTAATCGGCGATTAATTCTCTCTCTCTCTCCTCCACTCGCTTTCCTCTCTCTAGACTTAAAATTCAACCTAAATGCAATTCAAATAAATGTTAATCTCAGATGCAACCCAAATTTTGTCTCCCTCCCATCCGCAACCCCATTTCATCTCTCCGCTTCTCGCCTCCGCCGCATCGGATTCCATTATCAACTCCCTTCACTTTATGGAATGACTGACTACCGTTTACCCCCCACCATGAATCTCTGGGCGGATGACAACGCCTCCATGATGGATGTTTTCATGAACACCGATCTCAGTTCTTTCTGGGTTACGCCGCCGCAGCCGCAGCCGCAGCAACTTCCTCACCCACCCTATTCGACGTCAACTGACCCGAGTAAACCCGTCGGTCAAGCACCACCACCGTCGGTTTTTAACCAAGAGACTCTTATGCAGCGTCTCCAAACGTTGATTGAAGGTGCTCATGAGAACTGGACTTACGCTATTTTCTGGCAGTCTTCGTATGATTATTCCGGCGGTACGGTGTTGGGGTGGGGAGATGGATATTATAAAGGGGAGGAAGATAAAGGGAAAGAGAAAGCGAAATCGAGCACTTCGAAAGCAGAGCAAGAGCACCGGAAGAAGGTACTTCGTGAGCTTAATTCTCTCATTTCTGGTTCTCCTACCTCTGAAGGTGACGCCGTCGATGAGGTTGTCACCGACACCGAGTGGTTCTACTTGGTGTCGATGACTCAATCGTTTATATCCGGTATTGGATTGCCCGGTCAGGCGTTTTTCGATTCGAACCCTATTTGGGTTGCTGGTTCGGATCGGCTTGCGAGTTCGTTCTGTGAGCGAGCTCGTCAGGGTCAGGTTTTCGGGTTGCAGACTATGGTTTGTATCCCGTCGGCGAACGGAGTTGTTGAATTGGGATCGAGTGATTTGATTTTTCAAAACTCCGATCTGATGAATAAGGTTAGGGTTTTGTTTAATTTCAATAATCTGGAGGTTGAGACTTGGCCAATTAGTGGGGTTGACCAAGGGGAAAATGATCCTTCTTCGCTTTGGATTAGCGAACCATCTTCAAACGCCGCCATTGAAATTACTAATCCTGTTGCTTCAGCTTCAGTTCCAACTCCAAGCACAACAAACAGCCAACCGATTTCCAAAATTACAACAGAGTCGATCGAGAACCAACCTAAATCTAGTGTTGTGATTGAAACTCCAAGCTCTGCTACCCCTCCTCCTTCTCAAAAAACTCACCGACTGTCACAGCCGATTCAGACACAGAGCTTCTTCAACAACAGGGAATTGAATTTCTCTGAATTTGGGTATGAGAATGGCCGGTTGAAGGATGGGAATTCGACATCGTTGAAGCCGGAATCTGGTGAGATTCTGAATTTTGGGGAGAGTAAGAGGAATTCTTACCCCAACACAGATAACAACTTGCCTTCTGGAAATTCTTTATTTGGTGGGGATGAGAACAAGAAGAAGAGGTCTCCCACTTCACGTGGGAGTAATGAAGAGGGGATGCTTTCTTTTACTTCTGGTGTGATTCTTCCTTCTTCTGGGGGTGTGAAATCGGGTGTTTGTGCTGGCGATTCTGATCACTCTGATCTTGAAGCTTCGGTGATTCGTGAGGTGGAGAGTAGTAGAGTGGTGGAACCGGAGAAACGGCCTCGAAAAAGAGGGCGAAAGCCAGCAAATGGTAGAGAAGAACCATTGAATCACGTTGAAGCAGAAAGGCAGAGAAGAGAAAAGCTTAACCAAAGATTCTATGCTCTTCGAGCTGTTGTTCCGAATGTATCGAAAATGGACAAAGCTTCACTCCTTGGTGATGCTATCTCTTACATCAATGAACTCAGAGGGAAGCTTCAAACTGCAGAATCAGATAAAGAGGATTTGCAGAAGCAATTGGATTCAGTGAAGAAGTTAATGATATCTTCTAGTAAAGATCCGTGCATATCAAGCTCAAATCAACCCCCACCAGATCAAGACATAAAATCATCAAATATAAACCATAACGATATCGAAACCGATATCGACGTGAAGATAATCAGTTGGGATGCTATGATCCGAATCCAATCTAGTAAGAAAAACCATCCTGCTGCACGACTGATGGTGGCTTTGGAAGAACTTGACTTGGATATCAACCACGCGAGCATCTCAGTTGTCAATGATCTCATGATCCAACAAGCAACTGTGAAGATGGGTAGTCGGTTATACACTCAAGACCAGCTAAGGATAGCATTATCGTCGAAAATTGGCACAACTCGGTAGCCATTGTTATCTCCATCCACTGTGTTTATTATCTGAAGTAGCATTTGTTTAGAAGAGCTCGAGCCGAAGAAGGGATATGCGATATGCAAACAGCGTAGGCTCTGTAATATACTGTTCTCTACTTGTTCTTTAGGTAGTGGTGTTTTAGTATTTAAGTGATTCTGAGATGATTCACATGAAGGAGTTGGAAAGATAGCAATGGAGAAGAAAGAAGGAAAGTAGTGGCTTGGCTCCAATTCATGTGAATAGTTAAAAGAAGAAACTTTCTATTATTGTATATATTCAAAGCCATAAATGTGAACCTGCAGAAGTTTCTGTATTTGGTCAGTGAAAATATTTCCTATGACATGTTTGTTAGATTGTAGTGTTGTATCTTATTTCCAATGTAAAACTCTATCCAGAATTTTCTCTTGCTGGATTGAAGAACATAAATGATTCAAATAGAAGAAACTCTCTTGGTTCA 2743 43.86 MTDYRLPPTMNLWADDNASMMDVFMNTDLSSFWVTPPQPQPQQLPHPPYSTSTDPSKPVGQAPPPSVFNQETLMQRLQTLIEGAHENWTYAIFWQSSYDYSGGTVLGWGDGYYKGEEDKGKEKAKSSTSKAEQEHRKKVLRELNSLISGSPTSEGDAVDEVVTDTEWFYLVSMTQSFISGIGLPGQAFFDSNPIWVAGSDRLASSFCERARQGQVFGLQTMVCIPSANGVVELGSSDLIFQNSDLMNKVRVLFNFNNLEVETWPISGVDQGENDPSSLWISEPSSNAAIEITNPVASASVPTPSTTNSQPISKITTESIENQPKSSVVIETPSSATPPPSQKTHRLSQPIQTQSFFNNRELNFSEFGYENGRLKDGNSTSLKPESGEILNFGESKRNSYPNTDNNLPSGNSLFGGDENKKKRSPTSRGSNEEGMLSFTSGVILPSSGGVKSGVCAGDSDHSDLEASVIREVESSRVVEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKLQTAESDKEDLQKQLDSVKKLMISSSKDPCISSSNQPPPDQDIKSSNINHNDIETDIDVKIISWDAMIRIQSSKKNHPAARLMVALEELDLDINHASISVVNDLMIQQATVKMGSRLYTQDQLRIALSSKIGTTR 682
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 11051778 11054520 + XM_039031803.1 Bhi05g00500 34710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g00500 682 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 498 566 IPR036638 GO:0046983
Bhi05g00500 682 MobiDBLite consensus disorder prediction 117 136 - -
Bhi05g00500 682 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 73 253 IPR025610 -
Bhi05g00500 682 MobiDBLite consensus disorder prediction 391 433 - -
Bhi05g00500 682 Gene3D - 494 571 IPR036638 GO:0046983
Bhi05g00500 682 MobiDBLite consensus disorder prediction 34 64 - -
Bhi05g00500 682 MobiDBLite consensus disorder prediction 293 348 - -
Bhi05g00500 682 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 495 544 IPR011598 GO:0046983
Bhi05g00500 682 Coils Coil 541 568 - -
Bhi05g00500 682 PANTHER MYC 13 679 IPR045084 GO:0003700|GO:0006355
Bhi05g00500 682 CDD bHLH_AtAIB_like 492 567 - -
Bhi05g00500 682 SMART finulus 501 550 IPR011598 GO:0046983
Bhi05g00500 682 MobiDBLite consensus disorder prediction 470 505 - -
Bhi05g00500 682 MobiDBLite consensus disorder prediction 573 596 - -
Bhi05g00500 682 MobiDBLite consensus disorder prediction 38 62 - -
Bhi05g00500 682 MobiDBLite consensus disorder prediction 391 412 - -
Bhi05g00500 682 PANTHER TRANSCRIPTION FACTOR MYC2 13 679 - -
Bhi05g00500 682 MobiDBLite consensus disorder prediction 573 593 - -
Bhi05g00500 682 Pfam Helix-loop-helix DNA-binding domain 499 544 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi05g00500 Bhi11g00156 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g00500 Bhi-Chr5:11051778 Bhi12g02164 Bhi-Chr12:68505650 3.50E-14 dispersed
Bhi12g01452 Bhi-Chr12:47002013 Bhi05g00500 Bhi-Chr5:11051778 1.15E-11 dispersed
Bhi12g01453 Bhi-Chr12:47002013 Bhi05g00500 Bhi-Chr5:11051778 1.45E-11 dispersed
Bhi05g00371 Bhi-Chr5:7108226 Bhi05g00500 Bhi-Chr5:11051778 3.23E-09 transposed
Bhi10g01477 Bhi-Chr10:35296201 Bhi05g00500 Bhi-Chr5:11051778 9.38E-07 transposed
Bhi11g00156 Bhi-Chr11:3623455 Bhi05g00500 Bhi-Chr5:11051778 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1136 PF14215 bHLH-MYC_N 1.70E-54 CL0161 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g00500 K13422 - csv:101218165 1178.31