Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g00551 ATGGCTGGTCTGGATTTAGGCAATCACTATATTCACCAACTTCAAAGGCCTAATTTCAATCTTCCCCACCACCACCATCAAGACTCTCAATCTCGTCATGACAACGAATCCCATCATCCATCGGAATTCGTCGCCGCAGACTCTACTGCCCCGGCCACCGATATGGTTTCCTCTCGCCGACCACGCGGCCGTCCACCCGGTTCCAAAAACAAACCGAAGCCACCGGTCATCATAACTCGGGAAAGTGCCAATACCCTAAGGGCTCATATTCTTGAGGTTGGTAGTGGCTGCGACGTCTTCGATAGTATCGCTACCTATGCTCGTCGTCGCCAACGTGGGATCTGCATCTTGAGCGGTAGTGGAATGGTTACGAATGTCAACTTACGGCAACCGACGGCCGCGGGGTCTGTGTTAACCCTACATGGGAGGTTTGAGATATTATCCCTTACTGGATCTTTCTTGCCGCCGCCTGCTCCTCCCGGCGCCACTAGTTTGACTATATACTTAGCCGGTGGGCAAGGGCAAGTGGTGGGTGGCAACGTTGTCGGGGAACTAGTAGCGGCAGGGCCAGTGACAATAATCGCCGCATCATTTACAAATGTAGCATACGAGAGATTGCCACTGGAAGAACAAGAGCAAGAACAGGACCAAGAACAAGACCAACTTCAGATGCAACCACCGACGTCGCAGGGTGGCGGCAACGACGGTAGCTGCGGAAACAATAACAACCCATTTCCAGATCCATCTTCAGGGCTTCCTTTCTTCAATTTGCCTTTGAATATGCAAAACCAAATTCAGCTACCATTCTGA 810 51.36 MAGLDLGNHYIHQLQRPNFNLPHHHHQDSQSRHDNESHHPSEFVAADSTAPATDMVSSRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVGSGCDVFDSIATYARRRQRGICILSGSGMVTNVNLRQPTAAGSVLTLHGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGELVAAGPVTIIAASFTNVAYERLPLEEQEQEQDQEQDQLQMQPPTSQGGGNDGSCGNNNNPFPDPSSGLPFFNLPLNMQNQIQLPF 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 13546805 13547614 + XM_039032893.1 Bhi05g00551 34761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g00551 269 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 268 - -
Bhi05g00551 269 Gene3D - 86 220 - -
Bhi05g00551 269 ProSiteProfiles PPC domain profile profile. 83 219 IPR005175 -
Bhi05g00551 269 MobiDBLite consensus disorder prediction 210 256 - -
Bhi05g00551 269 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 268 IPR014476 GO:0003680
Bhi05g00551 269 MobiDBLite consensus disorder prediction 19 76 - -
Bhi05g00551 269 MobiDBLite consensus disorder prediction 21 41 - -
Bhi05g00551 269 CDD DUF296 87 170 IPR005175 -
Bhi05g00551 269 MobiDBLite consensus disorder prediction 218 256 - -
Bhi05g00551 269 Pfam Plants and Prokaryotes Conserved (PCC) domain 87 200 IPR005175 -
Bhi05g00551 269 SUPERFAMILY AF0104/ALDC/Ptd012-like 83 212 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g00551 Bhi-Chr5:13546805 Bhi12g02568 Bhi-Chr12:79549718 1.25E-96 dispersed
Bhi05g00551 Bhi-Chr5:13546805 Bhi01g00104 Bhi-Chr1:2168956 2.23E-110 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g00551 - - cmo:103503535 397.127