Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g00588 AATCTTCCCAACAATCTCATCATTTCTTATGTTTCCCTTTTCATCTCAATTCCAACTCTCTCTAAAACATTATTCTTTGAGAATTTTCAGTTTTGCTTCTGGAGCCAAAAATGGAGCCCTCAATTAAATGTGCCTTTTTTGGCTGCCTATTGATTGTGCTCTTGCCTGCTCTGTGCTACTCTCAAGACAATTTTGTTTACTCTAGAGCCACTTATTATGGCAGCCCTGATTGCTATGGAACACCATCTGGGGCTTGTGGATTTGGTGAATTTGGAAGGACTGTGAATGATGGCAGTGTTGCTGCAGTTTCCTATCTCTATAGAAATGGTTCTGGTTGTGGTGCATGCTACCAGGTTAGGTGCACCAATCCAAAATATTGCAGTGGAAGTGGAGCATTTGTAGTGGTGACAGACCATGGTGAAGGGGATTACACTGACTTTATATTAAGCCCAAGAGCCTATGCAAAATTGGCTCATCCAAACACAGCCTTAGAATTGTTCTCATATGGTGTTGTTGATGTTGAATTCAGAAGGGTTTCTTGCCAATACCCTAATTACAATACACTCAAATTTAAGGTTCATGAACATAGTAGATACCCTGATTATTTGGCCATTGTTATCATTTATGTTGCTGGAAAAAATGATATCACTGCTGTTGAATTGTGGCAGGAGGATTGCAATGAATGGAAGGGGATGAGGAGATCCCATGGAGCTGTTTGGGACATGGCAAACCCTCCTAAAGGAGACATAAAATTGAGATTTCAAGTGAGTGGAAGTATGGGATATGGAAGATGGATGGTGGCAACCACTGCTCTCCCAACTTATTGGAAGGCAGGAGTTGCTTATGACACTGACATTAACCTCTATTAATAGGACTTGCTTATAATATATTTATGTTATGTGTTTTATTATGCAAATGAAGAGTAGGAGATCAAATTATTTAGCATATATATATATATATATATATGTAATACATAAGTTATGGTGATTTTGGTTTTGGTTTTTATGTGGGGAATTTTGTTTAAGTTGTTATTTTGTGGCTATTTATATGGTTGGGTGGTGAATATATATATATATATATATTTCTAGGGTTGTTGTAATGCCCAATGATGTGATTTGTGTACTTTTGGAAATTATGGTATGTGGTGGAAAGAAATATGAATAAAACTTCAACTTTTTTGTTTATGGATCAAATAA 1196 36.71 MEPSIKCAFFGCLLIVLLPALCYSQDNFVYSRATYYGSPDCYGTPSGACGFGEFGRTVNDGSVAAVSYLYRNGSGCGACYQVRCTNPKYCSGSGAFVVVTDHGEGDYTDFILSPRAYAKLAHPNTALELFSYGVVDVEFRRVSCQYPNYNTLKFKVHEHSRYPDYLAIVIIYVAGKNDITAVELWQEDCNEWKGMRRSHGAVWDMANPPKGDIKLRFQVSGSMGYGRWMVATTALPTYWKAGVAYDTDINLY 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 15351398 15355159 + XM_039032444.1 Bhi05g00588 34798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g00588 252 Gene3D - 20 144 IPR036908 -
Bhi05g00588 252 PANTHER EXPANSIN-B3 12 251 - -
Bhi05g00588 252 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 149 IPR007112 -
Bhi05g00588 252 Gene3D - 145 248 IPR036749 -
Bhi05g00588 252 PANTHER EXPANSIN-LIKE B1 12 251 - -
Bhi05g00588 252 Pfam Lytic transglycolase 66 138 IPR009009 -
Bhi05g00588 252 SUPERFAMILY PHL pollen allergen 151 246 IPR036749 -
Bhi05g00588 252 SUPERFAMILY Barwin-like endoglucanases 14 148 IPR036908 -
Bhi05g00588 252 Pfam Expansin C-terminal domain 153 236 IPR007117 -
Bhi05g00588 252 PRINTS Expansin/Lol pI family signature 27 42 IPR007118 GO:0005576
Bhi05g00588 252 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Bhi05g00588 252 PRINTS Expansin/Lol pI family signature 132 148 IPR007118 GO:0005576
Bhi05g00588 252 PRINTS Expansin/Lol pI family signature 192 206 IPR007118 GO:0005576
Bhi05g00588 252 PRINTS Expansin/Lol pI family signature 233 247 IPR007118 GO:0005576
Bhi05g00588 252 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 164 247 IPR007117 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g00521 Bhi-Chr5:12333586 Bhi05g00588 Bhi-Chr5:15351398 2.29E-68 dispersed
Bhi05g00588 Bhi-Chr5:15351398 Bhi05g01627 Bhi-Chr5:53293447 1.43E-56 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g00588 - - csv:101215548 487.648