Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g00589 AATTTAGCACATAGTCACAAAGGCCTCTCTTTCAACCCACCCCCTTCTTCTTCCTCAACCATTTCACCATTCTTTTTCCACAGCCATTTATTAGATTCCTTCAATGGTCCTTTCTTCTCCATTGGATTTCGCTGATTCTTAACCAAAAAACCCATCTCAATTCCTTCATTTCCTCTTGATTTTACCCTTTTTTTCTCTCATTTTTTTTGGACTTTTGAACATATAACTCTTCTGGGTTTTTTCTGCCTTCCTTTTTCTTTCTGCAAATTTTTCCCTTCTGGGTTTGTTGTAGACAGCCCTCTTTTTGTAACCCAGGTGTATATGCTTACAGATTTTTAACAAAACAATCATATTTCTTAATTTTTCTTGATTTTTTTCCTTTTTTTGTGAATAAATAAGTTATTTAAGTCAAAGTTTCTTCGAATTTTCTCTTGAACCAAATATTTAAATAAATAGGAAAAAGAACACAAAAAAAGGGAAAAAGAGAGTGATATGGGAAAGCATGGACCTTGCTGTCACTGTGGAGTTACAAGCACTCCTCTTTGGCGTAATGGACCTCCTGATAAACCGGTATTATGCAATGCATGCGGATCTCGATGGAGGACTAAAGGAACGCTTGCAAACTATACCCCTTTGCATGCTCGGGCCGATCCTGATGAATATGAAGATCACAGGGTTTCTAGGGTGAAGAGCATTTCAATAAATAAAAACAAAGAAGTTAAACTGCTGAAAAGAAAGCTGCAACAAGCAGATGGATCAATTGGGTGGATGATTCCCGATCAGGGTCAGGGTTACCATAGAGTAGTGGATGAAGATACGAGCAATAGATCCAGTTCTGGATCGGCCATATCTAATCCTGAGAGTTGTGCCCATTTCAGCAGTGCAGATGCAAGTGATTTGACAGGTCCATCTCAGTCAATAGTGTGGGAGTCCATGGTGCCTTCCAGGAAGAGGACCTGTGTGAATCGTCCAAAGCAGTCCCCGGTTGAAAAATTAACTAAAGATCTATATAGTATTTTACGTGAGCAGAGATCGTCCTACTTCTCTGAAGCTTCCGAGGATGATCTGCTTTTTGAGAGTGAAAAACCTATGGTCTCTGTTGAGATAGGTCATGGAAGTATTCTCATTAGGCATCCAAGCTCGATAGCTCGAGAAGAGGAATCTGAAGCTAGCTCAGTTTCAGTTGATAACAAGCAATGCTTGGTAAATGAGGTCTATTCACCCCATTCTTCAACTGTTCTTGTATGTAGTGAAAACAAGGGCATGAATTTTCCAACATCTAGGACTGGAAAGATGAAGAATGTTTATGGATCAGGAGTACAGCAAGAACAGATTAAAAGGGACGATTCTCTTCACGAATGCTTACAAATGCTTGGAAACCATAAATCACCCTTATGTGATGTAGATATAAATGACATTATAAACTTTGGAGAGTTTGCGAGACAACTAACAAATGAAGAACAGCAGCAATTAATGAAGTACCTACCACAGGTTGATATTGCTGAATTTCCGGAGACCCTCGAGAGCATGTTTAATAGCCCCTATTTCAAGGAGAATTTAACTTCCTTCCAACAACTGCTTAGCGAGGGTGTTTTTGATGCTTCCTTCCTTGGAACAAAGATTGAAGACTGCAAGACTCTTAAAAGGCTTGTATTGTATAATTCTTCAAAATCGAAATGGGTCGAAAGCTATCATCAACTTAAGAAATGTAAAAATGGTAGCAAAGGACCTTTTCTTTCCCATGCCAATGCGTCGGTGTCGAGTAACTTCATGAATGTTAAGCAATTGCGTGAGAGCTACAATCAGAATATTTCAGAGGTAAAGACCATCATGAAGAGTCCCAAAAGGTTGGTGATGAAGGAAAATAAGGATCCTGGAAAGAATGATGGATCTTGCTTCAGCCCTAGAAGCTTATTTGCTTTGCCTCCTGATGGAAGCTCCCTCATGCTTGAATCCTTACGTTTCGTCGAAGAAAGTTCAGATCAAGATCTATTGCTAGATGTACGGTCAAATAGTTCATTCCCACAAGCGGAGCTCCTTCACCCGACCTCTCATTCTGGTGGTAGGCAGGCTAGCACATGTAGTAGCTCAGTCCACCCACATCTTGTTCATCACTAACAACTGTATTTCGATTTCATTACAAGTGTACCTTCTGCTTTTAGCTAATAGCGATGGCTTGGACTCGCATACTTTGCATTGTAAAAGAAAACTCGGTAAATGAGGTCGAATGGCAACTTTTTCGTTTCACCCTTGAAGTTCGAATGGTCGAAACATGAATTTGGGTGGAAATTTTTGTATAGACACTAGATTTGTAATATATATACACTTGAATTTTATGTATTGAAGAATTGATAGTTACAAGATCTTTGTATGCAAAA 2378 39.23 MGKHGPCCHCGVTSTPLWRNGPPDKPVLCNACGSRWRTKGTLANYTPLHARADPDEYEDHRVSRVKSISINKNKEVKLLKRKLQQADGSIGWMIPDQGQGYHRVVDEDTSNRSSSGSAISNPESCAHFSSADASDLTGPSQSIVWESMVPSRKRTCVNRPKQSPVEKLTKDLYSILREQRSSYFSEASEDDLLFESEKPMVSVEIGHGSILIRHPSSIAREEESEASSVSVDNKQCLVNEVYSPHSSTVLVCSENKGMNFPTSRTGKMKNVYGSGVQQEQIKRDDSLHECLQMLGNHKSPLCDVDINDIINFGEFARQLTNEEQQQLMKYLPQVDIAEFPETLESMFNSPYFKENLTSFQQLLSEGVFDASFLGTKIEDCKTLKRLVLYNSSKSKWVESYHQLKKCKNGSKGPFLSHANASVSSNFMNVKQLRESYNQNISEVKTIMKSPKRLVMKENKDPGKNDGSCFSPRSLFALPPDGSSLMLESLRFVEESSDQDLLLDVRSNSSFPQAELLHPTSHSGGRQASTCSSSVHPHLVHH 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 15387810 15394551 - XM_039032713.1 Bhi05g00589 34799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g00589 541 CDD ZnF_GATA 6 51 IPR000679 GO:0006355|GO:0043565
Bhi05g00589 541 MobiDBLite consensus disorder prediction 514 535 - -
Bhi05g00589 541 PANTHER OSJNBB0038F03.10 PROTEIN 1 541 IPR044589 -
Bhi05g00589 541 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 297 406 IPR044867 -
Bhi05g00589 541 Pfam Asx homology domain 289 371 IPR028020 -
Bhi05g00589 541 Gene3D - 4 85 IPR013088 GO:0006355|GO:0008270
Bhi05g00589 541 PANTHER GATA TRANSCRIPTION FACTOR 26 1 541 - -
Bhi05g00589 541 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 45 - -
Bhi05g00589 541 MobiDBLite consensus disorder prediction 514 541 - -
Bhi05g00589 541 SMART GATA_3 1 55 IPR000679 GO:0006355|GO:0043565
Bhi05g00589 541 ProSiteProfiles GATA-type zinc finger domain profile. 7 40 IPR000679 GO:0006355|GO:0043565
Bhi05g00589 541 Gene3D - 292 384 IPR038108 -
Bhi05g00589 541 Pfam GATA zinc finger 7 41 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g00589 Bhi-Chr5:15387810 Bhi11g00074 Bhi-Chr11:1812731 0 dispersed
Bhi05g00589 Bhi-Chr5:15387810 Bhi12g01901 Bhi-Chr12:60754479 3.83E-07 transposed
Bhi05g00589 Bhi-Chr5:15387810 Bhi01g01062 Bhi-Chr1:19721471 4.92E-07 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1149 PF13919 ASXH 5.00E-10 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g00589 - - csv:101215311 1035.4