Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g00675 TCTTCGTTTCCAGTTTTCCCTTCGAGTTCCACCAGCACTGCGACAGCGCCATTCTTCCATTCTCCCTCGCCTCACCGTCCGCTACTTTGTCCCCTCGCCGTCGATCTCCCTCACGGCGGTTCTCTCATTACAGTCCATCGATTTCCAGTCGCAGTGAGTCCAAACTCCAAAGAACTCTCTCAGAGCCTTTCAACCATGGCTTCCCATTCCCCTAACCTCGAATGTCGGATGTACGAAGCAAAGTACCCCGAGGTCGACATGGCCGTCATGATCCAGGTCAAGAACATCGCCGACATGGGTGCCTACGTCTCCCTTCTTGAGTACAACAATATCGAGGGTATGATTCTTTTCTCCGAGCTCTCTCGCCGTCGAATTCGTAGTGTCAGCAGCTTAATTAAGGTCGGTCGAATCGAGCCCGTCATGGTCCTCAGGGTCGATAAGGAGAAGGGTTATATTGATTTGAGTAAGAGAAGGGTGTCCGAGGAGGATATTCAGGCCTGTGAGGAGAGGTATAACAAGAGCAAGCTTGTTCACTCTATAATGCGCCATGTCGCTGAGACTATGAACATTGATTTGGAGGACTTGTATATCCATGTTGGCTGGCCTTTGTACCGGAAATATGGTCATGCTTTTGAGGCATTCAAGATCATTGTAACTGACCCTGACTCAGTGTTGAATTCTCTCACACGTGAAGTCAAGGAAGCTGGTCCTGATGGACAGGAGGTAACTAAGATAGTTCCTGCAATGTCTGAGGATGTAAAAGATGCACTAATAAAGAATATTAGAAGAAGAATGACTCCCCAACCCTTGAAGGTCCGAGCTGATATTGAGATGAAGTGTTTCCAATTTGATGGCGTTCTTCACATTAAGGAAGCAATGCGTAAAGCTGAAGCTGCTGGAAATGATGATTGCCCTGTCAAAATTAAATTGGTTGCTCCTCCACTCTACGTCCTTACTACCCAGACACTTGACAAGGAGCAAGGAATCACTGTTCTCGAAAAAGCAATCACTGCTTGCACTGAGGCAATCGAGCATCACAAGGGAAAGCTTGTGGTGAAGGAGGCACCCAGAGCGGTGAGTGAAAGAGATGACAAATTGCTTGCTGAGCACATGGCGAAGCTACGACAAGACAATGAAGAAATCAGTGGAGATGAGGATAGCGAGGAAGAGGAAGACACAGGGATGGGAGAAGTCGATGTTGAGAATGCAGGTTCTGGGATCACTGAGTAATGATTGTTGTAGGAATTTTGTAGGAATACAGATGAAGGTTTTCACTTTACCAAGAGACTGACACATACTTGAGTCATTACAATTGGAAAAATTGGAAGTCCGTGTGTATTGAGCTCTTATTCTTTCTCTTGATATCTGATGATTAAGCTTACGTGGTGGATCTCTTTTCGAGTA 1404 46.3 MASHSPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRIRSVSSLIKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETMNIDLEDLYIHVGWPLYRKYGHAFEAFKIIVTDPDSVLNSLTREVKEAGPDGQEVTKIVPAMSEDVKDALIKNIRRRMTPQPLKVRADIEMKCFQFDGVLHIKEAMRKAEAAGNDDCPVKIKLVAPPLYVLTTQTLDKEQGITVLEKAITACTEAIEHHKGKLVVKEAPRAVSERDDKLLAEHMAKLRQDNEEISGDEDSEEEEDTGMGEVDVENAGSGITE 344
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 20053375 20057941 + XM_039032358.1 Bhi05g00675 34885
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g00675 344 SUPERFAMILY Nucleic acid-binding proteins 10 92 IPR012340 -
Bhi05g00675 344 SUPERFAMILY eIF2alpha middle domain-like 94 199 IPR024054 -
Bhi05g00675 344 Pfam Eukaryotic translation initiation factor 2 alpha subunit 130 260 IPR011488 GO:0003723|GO:0003743
Bhi05g00675 344 Gene3D - 6 94 IPR012340 -
Bhi05g00675 344 MobiDBLite consensus disorder prediction 309 344 - -
Bhi05g00675 344 ProSiteProfiles S1 domain profile. 21 92 IPR003029 GO:0003676
Bhi05g00675 344 Coils Coil 306 326 - -
Bhi05g00675 344 SUPERFAMILY eIF-2-alpha, C-terminal domain 203 319 IPR024055 -
Bhi05g00675 344 CDD S1_IF2_alpha 18 93 IPR044126 GO:0003723
Bhi05g00675 344 Gene3D EIF_2_alpha 205 327 IPR024055 -
Bhi05g00675 344 SMART S1_6 19 92 IPR022967 -
Bhi05g00675 344 Pfam S1 RNA binding domain 18 92 IPR003029 GO:0003676
Bhi05g00675 344 Gene3D Translation initiation factor 2; subunit 1; domain 2 95 172 IPR024054 -
Bhi05g00675 344 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 5 344 IPR011488 GO:0003723|GO:0003743
Bhi05g00675 344 MobiDBLite consensus disorder prediction 316 332 - -
Bhi05g00675 344 PANTHER BNAC04G04870D PROTEIN 5 344 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g00674 Bhi-Chr5:20053373 Bhi05g00675 Bhi-Chr5:20053375 0 tandem
Bhi05g00675 Bhi-Chr5:20053375 Bhi05g00676 Bhi-Chr5:20053375 0 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g00675 K03237 - csv:101209681 639.417