Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi05g00794 | TTGTACTCCGCCATAGCTCTCACACCTCGACACGTTTCTCTTTTATACCATTCCTCTCTCCTTCTTTCTCTCTCAAACAACCTTCCCTTCATTCAACTCTTTGTCAATCCTTCTCTCTCTCTCTCTCTCTCTCTTAGGGTTTCTGCTCTGCTACTCATGATCTTTGCTGGACTTCGCTTGCTGCTTTGAAAATCACAGGGGTTCTGTTGAAGATCCAGGACTGATCGAGAGTCCATAGCAATCAACTGAGTTTGAAGTTTGGACAGTGTAGAAAATACACCAAGTATTGTGAGCCATGGACCAATCAGAGCGTTCTCAGCATCACCAACAATCACAGCAGCCTGCAGGCAGTGTCGGTGCAGGCCAATTACCATATTCTAATCCTTACCAAACAGCTCCGATGGTAGCTTCCGGGACTCCTGCTATTACGATTCCCCCAACTCAGCCACCATCCAGTTTCTCCAATTCACCACACCAGCTGGCCTACCAGCAGGCCCAGCACTTCCACCACCAGCAACAGCAGCAGCAGCAACAACAGCTCCAAATGTTTTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTTAAGAACCACAGTCTCCCCCTTGCTCGAATCAAGAAAATAATGAAAGCGGATGAAGACGTCCGAATGATTTCCGCTGAAGCACCAGTTATATTTGCAAAGGCATGTGAAATGTTCATCTTGGAGTTGACTCTGCGATCCTGGATTCATACAGAAGAGAACAAAAGAAGAACTTTACAGAAGAACGATATTGCAGCTGCAATTTCAAGGACTGATGTCTTCGATTTCTTGGTTGATATTATTCCTAGAGATGAACTGAAAGAAGAAGGTCTCGGAATCACAAAAGCTTCTATTCCGGTCGTTGGTTCCCCAGCTGATCTTCCTTATTACTATGTTCCATCGCAGCATCCGGTGGGTGCTACAGGGATGATCATGGGTAAGCAATTAGATCAAGTGAACATGTATGGTGGCACTGCCCAACAGCCTCGACCATCGATGCCTTTCATGCCGTGGCCACATACTCAACCTCAGCAGCAGCAACAAACTCAGCAGCAAAGTGATGCATAGGTAAAAGTAGTAGGTGTTTTCAAGACCGTCATGATTGATAGAGGCGATACTGAGTGACTTTGAATGTGTCTACTGTCTAGTTTAGTTCATAAAAGAAAAGCTCTTGTAGAGAACTTGTCAGTGATGACAAGTTGCAGTTGAGTTTGTATGATGAGAGGGTGTGGTTTATCTCTAATTATCTATTACTGTAATGTACAACAGTGTATGTGGAAGAGGATCCAACTTTGCCAAAAAGAACTCTAATTTCAATTTTGCTGAGCCTGTGTTTTTTAGCT | 1371 | 44.2 | MDQSERSQHHQQSQQPAGSVGAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQVNMYGGTAQQPRPSMPFMPWPHTQPQQQQQTQQQSDA | 266 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 25559483 | 25561811 | - | XM_039032508.1 | Bhi05g00794 | 35004 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi05g00794 | 266 | MobiDBLite | consensus disorder prediction | 8 | 39 | - | - | |
| Bhi05g00794 | 266 | Gene3D | Histone, subunit A | 64 | 181 | IPR009072 | GO:0046982 | |
| Bhi05g00794 | 266 | MobiDBLite | consensus disorder prediction | 233 | 266 | - | - | |
| Bhi05g00794 | 266 | Pfam | Core histone H2A/H2B/H3/H4 | 56 | 166 | IPR007125 | GO:0003677 | |
| Bhi05g00794 | 266 | PANTHER | NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 | 9 | 260 | - | - | |
| Bhi05g00794 | 266 | MobiDBLite | consensus disorder prediction | 250 | 266 | - | - | |
| Bhi05g00794 | 266 | PANTHER | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED | 9 | 260 | - | - | |
| Bhi05g00794 | 266 | MobiDBLite | consensus disorder prediction | 1 | 60 | - | - | |
| Bhi05g00794 | 266 | SUPERFAMILY | Histone-fold | 59 | 175 | IPR009072 | GO:0046982 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi01g02319 | Bhi-Chr1:56858843 | Bhi05g00794 | Bhi-Chr5:25559483 | 7.05E-30 | dispersed | |
| Bhi02g02031 | Bhi-Chr2:55177480 | Bhi05g00794 | Bhi-Chr5:25559483 | 1.74E-79 | dispersed | |
| Bhi02g02032 | Bhi-Chr2:55177481 | Bhi05g00794 | Bhi-Chr5:25559483 | 1.74E-79 | dispersed | |
| Bhi05g00794 | Bhi-Chr5:25559483 | Bhi05g00796 | Bhi-Chr5:25559483 | 0 | dispersed | |
| Bhi10g00560 | Bhi-Chr10:12268487 | Bhi05g00794 | Bhi-Chr5:25559483 | 3.21E-08 | dispersed | |
| Bhi05g00794 | Bhi-Chr5:25559483 | Bhi05g00795 | Bhi-Chr5:25559483 | 0 | tandem |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 1155 | PF00125 | Histone | 6.00E-18 | CL0012 | Bhi | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi05g00794 | K08066 | - | csv:101213813 | 427.557 |