Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g00797 GTACTCCGCCATAGCTCTCACACCTCGACACGTTTCTCTTTTATACCATTCCTCTCTCCTTCTTTCTCTCTCAAACAACCTTCCCTTCATTCAACTCTTTGTCAATCCTTCTCTCTCTCTCTCTCTCTCTCTTAGGGTTTCTGCTCTGCTACTCATGATCTTTGCTGGACTTCGCTTGCTGCTTTGAAAATCACAGCAGTGTAGAAAATACACCAAGTATTGTGAGCCATGGACCAATCAGAGCGTTCTCAGCATCACCAACAATCACAGCAGCCTGCAGGCAGTGTCGGTGCAGGCCAATTACCATATTCTAATCCTTACCAAACAGCTCCGATGGTAGCTTCCGGGACTCCTGCTATTACGATTCCCCCAACTCAGCCACCATCCAGTTTCTCCAATTCACCACACCAGCTGGCCTACCAGCAGGCCCAGCACTTCCACCACCAGCAACAGCAGCAGCAGCAACAACAGCTCCAAATGTTTTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTTAAGAACCACAGTCTCCCCCTTGCTCGAATCAAGAAAATAATGAAAGCGGATGAAGACGTCCGAATGATTTCCGCTGAAGCACCAGTTATATTTGCAAAGGCATGTGAAATGTTCATCTTGGAGTTGACTCTGCGATCCTGGATTCATACAGAAGAGAACAAAAGAAGAACTTTACAGAAGAACGATATTGCAGCTGCAATTTCAAGGACTGATGTCTTCGATTTCTTGGTTGATATTATTCCTAGAGATGAACTGAAAGAAGAAGGTCTCGGAATCACAAAAGCTTCTATTCCGGTCGTTGGTTCCCCAGCTGATCTTCCTTATTACTATGTTCCATCGCAGCATCCGGTGGGTGCTACAGGGATGATCATGGGTAAGCAATTAGATCAAGTGAACATGTATGGTGGCACTGCCCAACAGCCTCGACCATCGATGCCTTTCATGCCGTGGCCACATACTCAACCTCAGCAGCAGCAACAAACTCAGCAGCAAAGTGATGCATAGGTAAAAGTAGTAGGTGTTTTCAAGACCGTCATGATTGATAGAGGCGATACTGAGTGACTTTGAATGTGTCTACTGTCTAGTTTAGTTCATAAAAGAAAAGCTCTTGTAGAGAACTTGTCAGTGATGACAAGTTGCAGTTGAGTTTGTATGATGAGAGGGTGTGGTTTATCTCTAATTATCTATTACTGTAATGTACAACAGTGTATGTGGAAGAGGATCCAACTTTGCCAAAAAGAACTCTAATTTCAATTTTGCTGAGCCTGTGTTTTTTAGCT 1304 44.25 MDQSERSQHHQQSQQPAGSVGAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQVNMYGGTAQQPRPSMPFMPWPHTQPQQQQQTQQQSDA 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 25559483 25561809 - XM_039032506.1 Bhi05g00797 35007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g00797 266 MobiDBLite consensus disorder prediction 8 39 - -
Bhi05g00797 266 Gene3D Histone, subunit A 64 181 IPR009072 GO:0046982
Bhi05g00797 266 MobiDBLite consensus disorder prediction 233 266 - -
Bhi05g00797 266 Pfam Core histone H2A/H2B/H3/H4 56 166 IPR007125 GO:0003677
Bhi05g00797 266 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 9 260 - -
Bhi05g00797 266 MobiDBLite consensus disorder prediction 250 266 - -
Bhi05g00797 266 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 9 260 - -
Bhi05g00797 266 MobiDBLite consensus disorder prediction 1 60 - -
Bhi05g00797 266 SUPERFAMILY Histone-fold 59 175 IPR009072 GO:0046982
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g00795 Bhi-Chr5:25559483 Bhi05g00797 Bhi-Chr5:25559483 0 dispersed
Bhi05g00796 Bhi-Chr5:25559483 Bhi05g00797 Bhi-Chr5:25559483 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1158 PF00125 Histone 6.00E-18 CL0012 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g00797 K08066 - csv:101213813 427.557