Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g00828 GCCGTTAAAAGGGCAAAATGAAGGCTTGCAATATTGAAGAAATCCATTTTACAAATCCCTGGGCCCTTATTCTTTTGCAGTGGCGCTGTTTCTTCAACATTGAGCATTCTTCTTCTCTCCCAGTTGACTCTAATTCCATTTCCACCATAAAAGTCACCTTCTCTTTCAGTCAAACCATCTCCTATTTTTCTATTCTTTGTTTCCATGGAGAACACAATTTTCATTATCAAACAAACGATCCTTGAAATGTCTTCCATGACTAACCCGACCCTTCCATCAGCCACTTTGACCGATCAATCACACCCTCCAAGATTGCTTCGTCTTTCCCAGATACTCAACAAAACCCATCACAGATCTTAATTTACTCAAAGAAGCTTCATCGCTCCCACATTCGTGGTTTTCAAGTTCGACGCCATTGTTTCCCCCTTTCTGATTTTCCCCATTTGGCTTGCATTCAGCGTCTTATTATCAAATTAACCTGTGGAGAGATGAGAAGCGATGAAATGGAGAGAGCAACATTGGTGTTTTCCGCGTTTTCGCCTTTCCTGCGATTAATTTTGGCTATGGGATTCGTTTTACGGGTGTCTGCAAATGGGGAAGGTGAGGCCCTAAATGCCTTAAAGTCGAGTTTGGTCGACCCCAACAACGTCTTGCAAAGTTGGAATACCCTCCTTATGAATCCTTGCACTTGGTTTCATGTTACATGTGATGAAAAAGGAAGTGTTATACGGGTTGATCTTGGTAATGCGAATCTGTCTGGAAAACTGGTTCCACAGCTTGATCAACTCACAAACTTGCGATACTTCAATAACATCAGTGGAACAATTCCAGAACGATTTGGAAATTTGAAAAACTTGGAGGGCTTGGATCTTTATTCTAACAGTTTAATTGGTCCCATACCTGACACACTGGGCAAACTTACAAAACTAAGTACCTTGCGTCTGAACAACAATAGCTTATCAGGAACCATTCCAATGTCTTTAACAACTGTTCCACTTCAATTTCTGGATCTTTCAAATAACCTTCTGACAGGAGACATTCCCGTCAATGGCTCGTTTTCTCTTTTCACACCAATCAGTTTTGCCAATAATTCATTTCACATTTCTCCCTCTGCTCCTCCTCCCCCATTGACAGATGCACCACGAAAATTTTCAGGTGATAGGGCTAATGGAGCAACTATTGGAGCAATTGTTGCTGCTGCTGCTTTGCTGGTTATTGTGCCCGCTATTGTATTTACTTTTTGGCGGCGAAAAACTCGACAGATTCATTTCGTTGATGTACCTGCTGAAGAAGATCCTGAAATTAACCTGGGGCAGCTAAAAAGATATTCTTTACGTGAGCTGCAAGTTGCCACTGATTATTTTAGCCCACAGAACATTTTAGGCAAAGGTGGATTTGGCAAGGTTTATAAAGGTCGTTTGGCTGATGGTTCTCTTGTGGCTGTAAAACGATTGAAGGAGGAGCGTGCTGAGGTTGGAGAGCTTCAATTTCAAACTGAAGTAGAGATGATTAGCATGGCTGTCCATCGTAATCTACTCCGTCTAAATGGATTTTGCATGTCACCAACTGAAAGATTGCTTGTCTATCCTTATATGGCTAATGGAAGTCTAGCATCATGTTTAAGAGAGCGTAAACAATGCCGACCACCACTCAACTGGGCAATACGTAAACGAGTTGCTTTAGGGGCTGCACGGGGGCTTGAATATTTACATAATCATTGTGATCCTAAAATTATTCACCGTGATGTGAAAGCTGCGAATATATTATTAGATGATGAATTTGAGGCTGTTGTTGGAGATTTTGGGTTGGCTAAATTCATGAACTATAAGGATACTCATGTCACAACTGCTGTTCGTGGAACAATTGGCCATATAGCCCCCGAGTACCTCTCGTCTGGAAGGACTTCTGAAAAAACTGATGTTTTTGGTTATGGAGTAATGCTTCTCGAACTCGTAACTGGACAGAAAGCCTTTGATCTTGCTCGGTTAGCAAAAGATGATGATGTCATGCTGCTTGATTGGGTAAAAGGACTTCTGAATGATAAGAAACTGGAAACGTTGGTTGATCCCGATCTCGGAGGCAATTACGTAGAGGAAGAACTGGAGCAGGTAATTCAAGTTGCACTGCTTTGCACACAGAGCTCCCCAGTTGAACGACCTAAGATGTCAGAAGTGTTGCAAATGCTGGAAGGCGATGGTTTGGATGAGAGATGGGAAGATTGGCAGAAAGAAGACAGCTCACGTCAAAACTTCAATAGTATGGTTCATTCTTACCACCACCGGCGTAGAACTCCCCCGTTTATTGATTCCACTTCTCATATTGTTCCTGATGTGTTGTCCGGTCCAAGATGACTCTCTACATTTGGGTTTCTTTTCCAACAGTTGAAAAATGATGTAATTTGTAACAGCCCGTATATATATTTTTTTAATAATAATGTAATTTCAGTAAATTTTTACTAACTGAG 2464 41.44 MRSDEMERATLVFSAFSPFLRLILAMGFVLRVSANGEGEALNALKSSLVDPNNVLQSWNTLLMNPCTWFHVTCDEKGSVIRVDLGNANLSGKLVPQLDQLTNLRYFNNISGTIPERFGNLKNLEGLDLYSNSLIGPIPDTLGKLTKLSTLRLNNNSLSGTIPMSLTTVPLQFLDLSNNLLTGDIPVNGSFSLFTPISFANNSFHISPSAPPPPLTDAPRKFSGDRANGATIGAIVAAAALLVIVPAIVFTFWRRKTRQIHFVDVPAEEDPEINLGQLKRYSLRELQVATDYFSPQNILGKGGFGKVYKGRLADGSLVAVKRLKEERAEVGELQFQTEVEMISMAVHRNLLRLNGFCMSPTERLLVYPYMANGSLASCLRERKQCRPPLNWAIRKRVALGAARGLEYLHNHCDPKIIHRDVKAANILLDDEFEAVVGDFGLAKFMNYKDTHVTTAVRGTIGHIAPEYLSSGRTSEKTDVFGYGVMLLELVTGQKAFDLARLAKDDDVMLLDWVKGLLNDKKLETLVDPDLGGNYVEEELEQVIQVALLCTQSSPVERPKMSEVLQMLEGDGLDERWEDWQKEDSSRQNFNSMVHSYHHRRRTPPFIDSTSHIVPDVLSGPR 620
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 27588109 27610369 - XM_039031644.1 Bhi05g00828 35038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g00828 620 Pfam Protein kinase domain 295 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi05g00828 620 ProSiteProfiles Protein kinase domain profile. 292 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi05g00828 620 Gene3D Ribonuclease Inhibitor 34 209 IPR032675 -
Bhi05g00828 620 ProSitePatterns Protein kinases ATP-binding region signature. 298 320 IPR017441 GO:0005524
Bhi05g00828 620 SUPERFAMILY Protein kinase-like (PK-like) 272 567 IPR011009 -
Bhi05g00828 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
Bhi05g00828 620 Gene3D Transferase(Phosphotransferase) domain 1 369 586 - -
Bhi05g00828 620 Gene3D Phosphorylase Kinase; domain 1 261 368 - -
Bhi05g00828 620 SUPERFAMILY L domain-like 36 205 - -
Bhi05g00828 620 PANTHER BNAA08G11770D PROTEIN 17 620 IPR031048 GO:0004675|GO:0005102|GO:0006468
Bhi05g00828 620 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 17 620 - -
Bhi05g00828 620 Pfam Leucine rich repeat N-terminal domain 34 74 IPR013210 -
Bhi05g00828 620 SMART serkin_6 292 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g00828 Bhi-Chr5:27588109 Bhi11g01017 Bhi-Chr11:30394601 0 dispersed
Bhi05g00828 Bhi-Chr5:27588109 Bhi05g00829 Bhi-Chr5:27588110 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87747 PF00069 Pkinase 2.60E-45 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g00828 K13416 - csv:101216386 1012.68