Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g00829 CGACCCTTCCATCAGCCACTTTGACCGATCAATCACACCCTCCAAGATTGCTTCGTCTTTCCCAGATACTCAACAAAACCCATCACAGATCTTAATTTACTCAAAGAAGCTTCATCGCTCCCACATTCGTGGTTTTCAAGTTCGACGCCATTGTTTCCCCCTTTCTGATTTTCCCCATTTGGCTTGCATTCAGCGTCTTATTATCAAATTAACCTGTGGAGAGATGAGAAGCGATGAAATGGAGAGAGCAACATTGGTGTTTTCCGCGTTTTCGCCTTTCCTGCGATTAATTTTGGCTATGGGATTCGTTTTACGGGTGTCTGCAAATGGGGAAGGTGAGGCCCTAAATGCCTTAAAGTCGAGTTTGGTCGACCCCAACAACGTCTTGCAAAGTTGGAATACCCTCCTTATGAATCCTTGCACTTGGTTTCATGTTACATGTGATGAAAAAGGAAGTGTTATACGGGTTGATCTTGGTAATGCGAATCTGTCTGGAAAACTGGTTCCACAGCTTGATCAACTCACAAACTTGCGATACTTGGAACTCTACAGCAATAACATCAGTGGAACAATTCCAGAACGATTTGGAAATTTGAAAAACTTGGAGGGCTTGGATCTTTATTCTAACAGTTTAATTGGTCCCATACCTGACACACTGGGCAAACTTACAAAACTAAGTACCTTGCGTCTGAACAACAATAGCTTATCAGGAACCATTCCAATGTCTTTAACAACTGTTCCACTTCAATTTCTGGATCTTTCAAATAACCTTCTGACAGGAGACATTCCCGTCAATGGCTCGTTTTCTCTTTTCACACCAATCAGTTTTGCCAATAATTCATTTCACATTTCTCCCTCTGCTCCTCCTCCCCCATTGACAGATGCACCACGAAAATTTTCAGGTGATAGGGCTAATGGAGCAACTATTGGAGCAATTGTTGCTGCTGCTGCTTTGCTGGTTATTGTGCCCGCTATTGTATTTACTTTTTGGCGGCGAAAAACTCGACAGATTCATTTCGTTGATGTACCTGCTGAAGAAGATCCTGAAATTAACCTGGGGCAGCTAAAAAGATATTCTTTACGTGAGCTGCAAGTTGCCACTGATTATTTTAGCCCACAGAACATTTTAGGCAAAGGTGGATTTGGCAAGGTTTATAAAGGTCGTTTGGCTGATGGTTCTCTTGTGGCTGTAAAACGATTGAAGGAGGAGCGTGCTGAGGTTGGAGAGCTTCAATTTCAAACTGAAGTAGAGATGATTAGCATGGCTGTCCATCGTAATCTACTCCGTCTAAATGGATTTTGCATGTCACCAACTGAAAGATTGCTTGTCTATCCTTATATGGCTAATGGAAGTCTAGCATCATGTTTAAGAGAGCGTAAACAATGCCGACCACCACTCAACTGGGCAATACGTAAACGAGTTGCTTTAGGGGCTGCACGGGGGCTTGAATATTTACATAATCATTGTGATCCTAAAATTATTCACCGTGATGTGAAAGCTGCGAATATATTATTAGATGATGAATTTGAGGCTGTTGTTGGAGATTTTGGGTTGGCTAAATTCATGAACTATAAGGATACTCATGTCACAACTGCTGTTCGTGGAACAATTGGCCATATAGCCCCCGAGTACCTCTCGTCTGGAAGGACTTCTGAAAAAACTGATGTTTTTGGTTATGGAGTAATGCTTCTCGAACTCGTAACTGGACAGAAAGCCTTTGATCTTGCTCGGTTAGCAAAAGATGATGATGTCATGCTGCTTGATTGGGTAAAAGGACTTCTGAATGATAAGAAACTGGAAACGTTGGTTGATCCCGATCTCGGAGGCAATTACGTAGAGGAAGAACTGGAGCAGGTAATTCAAGTTGCACTGCTTTGCACACAGAGCTCCCCAGTTGAACGACCTAAGATGTCAGAAGTGTTGCAAATGCTGGAAGGCGATGGTTTGGATGAGAGATGGGAAGATTGGCAGAAAGAAGACAGCTCACGTCAAAACTTCAATAGTATGGTTCATTCTTACCACCACCGGCGTAGAACTCCCCCGTTTATTGATTCCACTTCTCATATTGTTCCTGATGTGTTGTCCGGTCCAAGATGACTCTCTACATTTGGGTTTCTTTTCCAACAGTTGAAAAATGATGTAATTTGTAACAGCCCGTATATATATTTTTTTAATAATAATGTAATTTCAGTAAATTTTTACTAACTGA 2210 41.86 MRSDEMERATLVFSAFSPFLRLILAMGFVLRVSANGEGEALNALKSSLVDPNNVLQSWNTLLMNPCTWFHVTCDEKGSVIRVDLGNANLSGKLVPQLDQLTNLRYLELYSNNISGTIPERFGNLKNLEGLDLYSNSLIGPIPDTLGKLTKLSTLRLNNNSLSGTIPMSLTTVPLQFLDLSNNLLTGDIPVNGSFSLFTPISFANNSFHISPSAPPPPLTDAPRKFSGDRANGATIGAIVAAAALLVIVPAIVFTFWRRKTRQIHFVDVPAEEDPEINLGQLKRYSLRELQVATDYFSPQNILGKGGFGKVYKGRLADGSLVAVKRLKEERAEVGELQFQTEVEMISMAVHRNLLRLNGFCMSPTERLLVYPYMANGSLASCLRERKQCRPPLNWAIRKRVALGAARGLEYLHNHCDPKIIHRDVKAANILLDDEFEAVVGDFGLAKFMNYKDTHVTTAVRGTIGHIAPEYLSSGRTSEKTDVFGYGVMLLELVTGQKAFDLARLAKDDDVMLLDWVKGLLNDKKLETLVDPDLGGNYVEEELEQVIQVALLCTQSSPVERPKMSEVLQMLEGDGLDERWEDWQKEDSSRQNFNSMVHSYHHRRRTPPFIDSTSHIVPDVLSGPR 624
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 27588110 27610104 - XM_039031645.1 Bhi05g00829 35039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g00829 624 Gene3D Ribonuclease Inhibitor 34 213 IPR032675 -
Bhi05g00829 624 Gene3D Phosphorylase Kinase; domain 1 265 372 - -
Bhi05g00829 624 Pfam Leucine rich repeat 101 161 IPR001611 GO:0005515
Bhi05g00829 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Bhi05g00829 624 SUPERFAMILY L domain-like 36 209 - -
Bhi05g00829 624 Pfam Leucine rich repeat N-terminal domain 34 74 IPR013210 -
Bhi05g00829 624 ProSiteProfiles Protein kinase domain profile. 296 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi05g00829 624 SMART serkin_6 296 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi05g00829 624 PANTHER BNAA08G11770D PROTEIN 17 624 IPR031048 GO:0004675|GO:0005102|GO:0006468
Bhi05g00829 624 Pfam Protein kinase domain 299 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi05g00829 624 Gene3D Transferase(Phosphotransferase) domain 1 373 590 - -
Bhi05g00829 624 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524
Bhi05g00829 624 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 17 624 - -
Bhi05g00829 624 SUPERFAMILY Protein kinase-like (PK-like) 276 571 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g00829 Bhi-Chr5:27588110 Bhi11g01017 Bhi-Chr11:30394601 0 dispersed
Bhi05g00828 Bhi-Chr5:27588109 Bhi05g00829 Bhi-Chr5:27588110 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87748 PF00069 Pkinase 2.60E-45 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g00829 K13416 - csv:101216386 1027.7