Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g00871 AAGTCCTTTTCATTATTCATAATTTTTGTGAAAGATGCCATTTGATACCATCTCGAGGGTCTGAGCTTATACCTAGCCCACAAAAGGGGGAAAAACCACCAAAATTCTTAAGAATTTCGCCCTCCTTATTCATTCCCAGAGGTTTTAATTAGGGTTTTTCCCGTTCATCCAATTGGGTCTCAATTCTGTTGAATTGGCCATTCCAAACTGCTAATAATCGCACTGCTACTGCTCTGCACATAAATCTTATTGCATAATTTTTTTTCTTTTTGTTTCCAAGAAAATAAAGAAAGAATGGGTGCTCAGAGAAAGGGAGCATCAAAGGTTTCCGAGGACCCCGAGGAGCTGGCACGAGTTTCGTTGCAGGCTGTTCTCCTTGCCGATAGCTTTACCACTAAGTTTCGCCCCATAACACTTGAACGCCCCAAGGTATTATTGCCACTCGTAAATGTCCCGATGATTAATTATACCTTATCCTGGCTCGAATCGGCGGGTGTTGAAGAGGTGTTTGTATTTTGCTGTGCTAACTCGAAGCAAGTAATTGATTATTTGGAGAACTCCGAGTGGGTATCCCTACCAGACTTTGCTGTCACAACTATAGAGTCGCACAACTCCATTAGTGCTGGAGACGCCTTGCGTTTGATCTATGAAAGAAATGTGATACATGGTGATTTTGTACTTATCACGGGAGACACCATAAGCAACATGTCACTTACGCAAGCTCTTCAAGAACACAAAGAGAGAAAGAAGAAAGATAGTAATGCTGTAATGACTATGGTTGTCAAACGGTCAAAGCCTTCTCCTATCACACACCAATCTCGGCTTGGCACCGATGAACTATTTATGGCAATTGATCACAATACGAAGCAGCTCTTGTACTATGAGGACAAGGTTGACCATTCAAAAGGAATAATACATCTTGACAAGTCATTGCTAATGGATAATCCTTCGATATCACTTCATAACGACATGCAGGATTGTTACATAGACATATGCTCCCCAGAAGTACTCAGCTTGTTTACTGACAATTTCGACTACCAACATCTACGTCGTCATTTTGTCAAGGGCTTGCTTCTAGATGATATCATGGGTTACAAGATTTACACACACGAAATTTACTCAAGCTATGCAGCTAGAATCGATAATTATCGAAGCTATGACACTGTTAGTAAGGACATAATACAAAGGTGGACATATCCACTGGTACCTGATGTTAAATTCTTTGGGAATTCTGCTTATAAACTTGAAAGGCAGGGAATGTATCGAGCATCAGAAATACTGCAGGCACGCTCTGCACAGGTTGGTCCGTTTACTGTTATTGGAGATAACAGCAAAATTGGTGGTAACACCAAAATTACGAATTCAATTATTGGGCAAGGTTGTAATATTGGATCAAATGTTACAATTGAAGGCTCTTATATATGGGACAATGTGACCATTGAAGATGGTTGTAAACTCAGTCATGCTATTGTATGTGATGGAGTTGTTATGAAGTCAGGAGCGAAACTGGAACCTGGTGTAATTTTGTCTTTCAAGGTTGTTGTAGGGGATCAATTTACCGTTCCATCATATTCAAAGGTATCTTTGTTTCAACAGCCAACCAATCAAGATAGCGATGAGGAGCTGGAATATGCAGATAATAGCAGTGGCATTGTAGAATTTGCAGATTCAACAGACAAGTCAAATAGTGCACTAATGTCCAAATCGCTGGAGGTGCAAGGCTGGCCTGCATCTGAGCTAGGCAAGGGAGGTCTAGGACATATTTGGTCAATTTGTGAAGGAAGTACTGAAGAAGAATGGAGGCACTCAGTTGCACCCATTCCTGCCGATAAACTTGAGAAGGTTCTGCACAAAGCAGCAGATGACGAGCTAGAGTTAACTCAAGATGCTAATATTTTACCACCTTCAGGGGAGTTGAAGTCCGACTCATATGTCTCAGATGGTGATGATAACGAAAGCTCTAGAGATGACTCCACCTACTTTGAGAAAGAGGTTGAAGCAACGTTTCTGAGGGCTGTGCACGAAAATATTGAAGTAGCCAATGTAATTTTGGAAGTGAACTCATTGCGGTTGTCATACAATAAGGTGGCTTCAGATTGTGCAGGAGCAATATTTTATTCTCTGATGAATTTTGCCTTAGATTCTCCACATGGTTCATCTAGTGAACTACTGCAAAATACTACAAATATAATTACGAAATGGAAAAGACTTTTGAAGTACTACCTAACTGACTTGGATGAAGAGATTGAAGTGATATTAAAATTTGAAGAGATATGCCTGGAATCTGCCAAGGAATTCACTCCACATTTTACTAAGATTTTGTGGCATCTATATGACCAAGAAATCATTCAAGAAGAGGCTATTCTGAAGTGGGATGCTGAGAAAAAGGAAGCGGATGATTCGGATAAGCTTTTCGTTAAGCAGGCTGAGAAATTCATTGAATGGTTAAAAGTTGCATCAGAGGAAGAGGAAGAAGAAGAGGAAGAAGAGGAAGAATAGAAATAGTTGAATGACATCTATATAGATTAGCAAATAGCAACAGGGCAGAGTCAGTAGACTGAAGAAGTCGTTTGTTGCTGAGTTTTTCATTTTTAAACATCAAATCTTGATAGTTGCTACCTGGTTTCCCAAATGTTAAAAGGGAACTTCGTCTTTTTCATCAACTTCTATGATTGTTTTATTGTCAATGTCCTATCATAGAAAGAAAAATTTTGGGGGAAATGTTTAAATCCTATTTTGTTTGCATTTTCAAA 2753 39.52 MGAQRKGASKVSEDPEELARVSLQAVLLADSFTTKFRPITLERPKVLLPLVNVPMINYTLSWLESAGVEEVFVFCCANSKQVIDYLENSEWVSLPDFAVTTIESHNSISAGDALRLIYERNVIHGDFVLITGDTISNMSLTQALQEHKERKKKDSNAVMTMVVKRSKPSPITHQSRLGTDELFMAIDHNTKQLLYYEDKVDHSKGIIHLDKSLLMDNPSISLHNDMQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLLDDIMGYKIYTHEIYSSYAARIDNYRSYDTVSKDIIQRWTYPLVPDVKFFGNSAYKLERQGMYRASEILQARSAQVGPFTVIGDNSKIGGNTKITNSIIGQGCNIGSNVTIEGSYIWDNVTIEDGCKLSHAIVCDGVVMKSGAKLEPGVILSFKVVVGDQFTVPSYSKVSLFQQPTNQDSDEELEYADNSSGIVEFADSTDKSNSALMSKSLEVQGWPASELGKGGLGHIWSICEGSTEEEWRHSVAPIPADKLEKVLHKAADDELELTQDANILPPSGELKSDSYVSDGDDNESSRDDSTYFEKEVEATFLRAVHENIEVANVILEVNSLRLSYNKVASDCAGAIFYSLMNFALDSPHGSSSELLQNTTNIITKWKRLLKYYLTDLDEEIEVILKFEEICLESAKEFTPHFTKILWHLYDQEIIQEEAILKWDAEKKEADDSDKLFVKQAEKFIEWLKVASEEEEEEEEEEEE 734
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 29681834 29701283 + XM_039031707.1 Bhi05g00871 35081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g00871 734 CDD eIF-2B_epsilon_N 23 239 IPR035543 -
Bhi05g00871 734 Coils Coil 715 734 - -
Bhi05g00871 734 SUPERFAMILY Nucleotide-diphospho-sugar transferases 22 369 IPR029044 -
Bhi05g00871 734 Gene3D - 550 730 - -
Bhi05g00871 734 Gene3D Hexapeptide repeat proteins 319 430 - -
Bhi05g00871 734 SUPERFAMILY ARM repeat 563 719 IPR016024 -
Bhi05g00871 734 SMART 542_3 637 724 IPR003307 GO:0005515
Bhi05g00871 734 MobiDBLite consensus disorder prediction 529 560 - -
Bhi05g00871 734 Pfam eIF4-gamma/eIF5/eIF2-epsilon 649 728 IPR003307 GO:0005515
Bhi05g00871 734 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 10 729 - -
Bhi05g00871 734 SUPERFAMILY Trimeric LpxA-like enzymes 266 429 IPR011004 -
Bhi05g00871 734 Pfam Nucleotidyl transferase 25 168 IPR005835 GO:0009058|GO:0016779
Bhi05g00871 734 CDD W2_eIF2B_epsilon 558 722 IPR044123 GO:0005085|GO:0031369
Bhi05g00871 734 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 10 303 IPR029044 -
Bhi05g00871 734 CDD LbH_eIF2B_epsilon 341 419 - -
Bhi05g00871 734 ProSiteProfiles W2 domain profile. 557 728 IPR003307 GO:0005515
Bhi05g00871 734 MobiDBLite consensus disorder prediction 545 560 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g01677 Bhi-Chr2:46563837 Bhi05g00871 Bhi-Chr5:29681834 2.67E-22 dispersed
Bhi06g00914 Bhi-Chr6:24393351 Bhi05g00871 Bhi-Chr5:29681834 7.27E-06 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g00871 K03240 - csv:101217025 1356.66