Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g00890 ATAATGCAATTCCCGCCCAAACACATCTTCGTGCTTCCGCCATTCAGACTTCTCAGAGGTCAGCCATGGACATCTCCTTGGCAGCAATGGATGATCCTCCTACCAGTCCCCTCAAGGCTTTCGCTACGTTTCTAATTCGCCACCACTCTGATCAGCTCAACTCCCTTGCTCATTCCCCTGATCCTAAGCTCCATTATCCTATATTTGTGGAATTCGCTGAGCTGATGGACGACGACCCACCTCTTGCTCGTCTTCTCTTCTCCCGTCCGACCGAGTATTTGCGTATTTTTGACGATGCAGCTGTTTGGGCTCATAAGATCATTTTGGGTGATTCGAAAAACGGAATTAAGAAAGATTTCATCCATGTTCGCATTAACGTCACTGGCTCCCCCCTGGAATTGGCAGAGACTTTTCCAAGTATTGGGTCTGTCAGAGTGAAGCATCGTGGAGTGCTTCTCACACTTAAAGGGACAGTAATCCGATCTGGGGCAATTAAGATGTATGAGGGGGAGAGGTGGTATATCTGCCGGAAATGCAAGCACAAGTTCCCAGTTTATCCAGAGCTTGAAACTAGAAACTCAATACAGTTACCATCATTTTGTCCTTCTCAGGATTTGAGCTCGGGGACGACGATTGGCACTGCTCGGCACGATAGGGGGGCAAAACCATGTGAAGGGAAAAATTTTGCGTGCTTGGAAGGTTCTGTCGTACGCCATGATTACCAAGAGATAAAAATTCAGGAGAGTACACAAGTACTGGGTGTGGGGTCCATTCCTCGTGCCATTCTAGTCATTCTCAAGGATGACCTTGTTGACCTTGTTAAAGCTGGAGATGATGTTATTGTTACAGGAGTATTGAGTGCTAAGTGGTCCCCAGACCTCAAAGATGTTCGGTGTGACCTTGATCCAATGCTCATTGCGAACCATGTGAGAAGAACCAATGAACTAAAGGCTGAGGTTGACATCCCTGATGATATAATTATGAAATTTCGGCAGTTCTGGTCAGATTTCAAAGACACTCCTTTAAAAGGAAGAAATGCTATTCTGAGAGGTATATGCCCTCAAGTGTTTGGACTTTTTACTGTAAAACTTGCAGTGGCTTTAACACTCATCGGAGGTGTACAACATGTGGATATATCTGGTACTAAAGTTCGAGGAGAATCTCATCTACTGTTGGTTGGCGATCCTGGTACTGGAAAGTCACAGTTCCTGAAATTTGCTGCCAAATTGAGCAACCGAGCTGTTATTACCACTGGATTAGGAAGCACTAGCGCAGGATTAACTGTTGCTGCTGTCAAGGATGGAGGCGAATGGATGCTGGAAGCTGGGGCACTTGTACTAGCTGATGGAGGACTTTGTTGCATAGATGAAGTGGACAGCATGAGAGAACATGACAGAGCCACAATCCATGAAGCAATGGAGCAGCAGACTATAAGTGTCGCAAAGGCTGGTCTTGTAACAACTCTCAGTACTAGAACGATAGTATTTGGCGCAACAAATCCTAAAGGACATTACGACCCTGAACAACCTCTCTCTGTCAATACAACACTCTCCGGTCCCTTATTGAGCAGATTTGATATCGTGCTTGTGCTTTTAGATACAAAAAACCCTGAATGGGATGCAGTAGTTTCATCTCATATTCTCACTGAGTGTGAACAAGAAAAGGGAAAGTGTGACAATGATCTTTCAAGTAACTGGCCTCTTACTATGCTTCGAAGATACATCCAATTCGTAAAAGGATACTTCAGACCGGTCCTGACTGAGGAGGCTGAGCAAATTATTTCAAACTATTATCAGCTTCAAAGAAGATCAGCAATGGATAATGCAGCCAGGACAACAGTACGCATGCTTGAAAGCTTGATACGCTTAGCTCAAGCGCATGCACGCCTCATGTTTAGAAATGAGGTTACCCGGCTCGATGCCATTACGGCTATTTTGTGCGTCGAATCATCCATGACGACCTCAGCTTTAGTGGATAGTGTTGGGAATGCCTTGCACTCCAATTTTACGGAGAACCCAGATGAGGAATACGCAAAGCAAGAAATTTTGATCCTTGAGAAGCTGAAGTCGATGGAAGAATAGACATTACCATGATGGAAGGCGGAAAGAACCCTTTTCAAGGGCCGTCGTTTTGTTTTTGTTTTTGTTTTTTGAGAATCAAGATAGTCGACATCCTCACATGCTTGAAGTTGTAGATACCAAAAAATATATATGTCTGGCATCTGCGTACAATCACATTTGTTTCGAAGAAAAATTTGTAAGGACGTCCGAGATTATTTAGATAGTTATGCTTGTTTTGCTAGATTTCTGCTTGAGAATGTGAGATGATGTTGTTTCAACAATATCTTTAAATCCCCAGATAATTTATAATAATATACTATAATTTGAATTTATGTAA 2397 43.35 MDISLAAMDDPPTSPLKAFATFLIRHHSDQLNSLAHSPDPKLHYPIFVEFAELMDDDPPLARLLFSRPTEYLRIFDDAAVWAHKIILGDSKNGIKKDFIHVRINVTGSPLELAETFPSIGSVRVKHRGVLLTLKGTVIRSGAIKMYEGERWYICRKCKHKFPVYPELETRNSIQLPSFCPSQDLSSGTTIGTARHDRGAKPCEGKNFACLEGSVVRHDYQEIKIQESTQVLGVGSIPRAILVILKDDLVDLVKAGDDVIVTGVLSAKWSPDLKDVRCDLDPMLIANHVRRTNELKAEVDIPDDIIMKFRQFWSDFKDTPLKGRNAILRGICPQVFGLFTVKLAVALTLIGGVQHVDISGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGEWMLEAGALVLADGGLCCIDEVDSMREHDRATIHEAMEQQTISVAKAGLVTTLSTRTIVFGATNPKGHYDPEQPLSVNTTLSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILTECEQEKGKCDNDLSSNWPLTMLRRYIQFVKGYFRPVLTEEAEQIISNYYQLQRRSAMDNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAITAILCVESSMTTSALVDSVGNALHSNFTENPDEEYAKQEILILEKLKSMEE 671
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 30690288 30756807 + XM_039030952.1 Bhi05g00890 35100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g00890 671 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 332 634 IPR027417 -
Bhi05g00890 671 Pfam MCM P-loop domain 324 527 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bhi05g00890 671 PANTHER DNA HELICASE MCM9 43 669 - -
Bhi05g00890 671 SUPERFAMILY Nucleic acid-binding proteins 43 273 IPR012340 -
Bhi05g00890 671 Gene3D - 305 635 IPR027417 -
Bhi05g00890 671 PRINTS Mini-chromosome maintenance (MCM) protein family signature 363 378 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bhi05g00890 671 PRINTS Mini-chromosome maintenance (MCM) protein family signature 421 435 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bhi05g00890 671 PRINTS Mini-chromosome maintenance (MCM) protein family signature 449 462 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bhi05g00890 671 PRINTS Mini-chromosome maintenance (MCM) protein family signature 472 484 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bhi05g00890 671 PRINTS Mini-chromosome maintenance (MCM) protein family signature 499 507 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bhi05g00890 671 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 43 669 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bhi05g00890 671 Gene3D - 146 217 - -
Bhi05g00890 671 Pfam MCM AAA-lid domain 548 629 IPR041562 -
Bhi05g00890 671 SMART AAA_5 364 513 IPR003593 -
Bhi05g00890 671 SMART mcm 115 631 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bhi05g00890 671 Pfam MCM OB domain 121 266 IPR033762 -
Bhi05g00890 671 ProSiteProfiles MCM family domain profile. 322 525 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bhi05g00890 671 CDD MCM9 325 629 - -
Bhi05g00890 671 Gene3D - 121 266 IPR012340 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g00890 Bhi-Chr5:30690288 Bhi05g00892 Bhi-Chr5:30690289 0 dispersed
Bhi05g00890 Bhi-Chr5:30690288 Bhi05g00891 Bhi-Chr5:30690288 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g00890 K10738 - csv:101205171 1209.13