Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g00891 ATAATGCAATTCCCGCCCAAACACATCTTCGTGCTTCCGCCATTCAGACTTCTCAGAGGTCAGCCATGGACATCTCCTTGGCAGCAATGGATGATCCTCCTACCAGTCCCCTCAAGGCTTTCGCTACGTTTCTAATTCGCCACCACTCTGATCAGCTCAACTCCCTTGCTCATTCCCCTGATCCTAAGCTCCATTATCCTATATTTGTGGAATTCGCTGAGCTGATGGACGACGACCCACCTCTTGCTCGTCTTCTCTTCTCCCGTCCGACCGAGTATTTGCGTATTTTTGACGATGCAGCTGTTTGGGCTCATAAGATCATTTTGGGTGATTCGAAAAACGGAATTAAGAAAGATTTCATCCATGTTCGCATTAACGTCACTGGCTCCCCCCTGGAATTGGCAGAGACTTTTCCAAGTATTGGGTCTGTCAGAGTGAAGCATCGTGGAGTGCTTCTCACACTTAAAGGGACAGTAATCCGATCTGGGGCAATTAAGATGTATGAGGGGGAGAGGTGGTATATCTGCCGGAAATGCAAGCACAAGTTCCCAGTTTATCCAGAGCTTGAAACTAGAAACTCAATACAGTTACCATCATTTTGTCCTTCTCAGGGGGCAAAACCATGTGAAGGGAAAAATTTTGCGTGCTTGGAAGGTTCTGTCGTACGCCATGATTACCAAGAGATAAAAATTCAGGAGAGTACACAAGTACTGGGTGTGGGGTCCATTCCTCGTGCCATTCTAGTCATTCTCAAGGATGACCTTGTTGACCTTGTTAAAGCTGGAGATGATGTTATTGTTACAGGAGTATTGAGTGCTAAGTGGTCCCCAGACCTCAAAGATGTTCGGTGTGACCTTGATCCAATGCTCATTGCGAACCATGTGAGAAGAACCAATGAACTAAAGGCTGAGGTTGACATCCCTGATGATATAATTATGAAATTTCGGCAGTTCTGGTCAGATTTCAAAGACACTCCTTTAAAAGGAAGAAATGCTATTCTGAGAGGTATATGCCCTCAAGTGTTTGGACTTTTTACTGTAAAACTTGCAGTGGCTTTAACACTCATCGGAGGTGTACAACATGTGGATATATCTGGTACTAAAGTTCGAGGAGAATCTCATCTACTGTTGGTTGGCGATCCTGGTACTGGAAAGTCACAGTTCCTGAAATTTGCTGCCAAATTGAGCAACCGAGCTGTTATTACCACTGGATTAGGAAGCACTAGCGCAGGATTAACTGTTGCTGCTGTCAAGGATGGAGGCGAATGGATGCTGGAAGCTGGGGCACTTGTACTAGCTGATGGAGGACTTTGTTGCATAGATGAAGTGGACAGCATGAGAGAACATGACAGAGCCACAATCCATGAAGCAATGGAGCAGCAGACTATAAGTGTCGCAAAGGCTGGTCTTGTAACAACTCTCAGTACTAGAACGATAGTATTTGGCGCAACAAATCCTAAAGGACATTACGACCCTGAACAACGTATCATTTTCACATTGTTTATGTGGCTTAATCTAATAACCTTAAGATTTGATATCGTGCTTGTGCTTTTAGATACAAAAAACCCTGAATGGGATGCAGTAGTTTCATCTCATATTCTCACTGAGTGTGAACAAGAAAAGGGAAAGTGTGACAATGATCTTTCAAGTAACTGGCCTCTTACTATGCTTCGAAGATACATCCAATTCGTAAAAGGATACTTCAGACCGGTCCTGACTGAGGAGGCTGAGCAAATTATTTCAAACTATTATCAGCTTCAAAGAAGATCAGCAATGGATAATGCAGCCAGGACAACAGTACGCATGCTTGAAAGCTTGATACGCTTAGCTCAAGCGCATGCACGCCTCATGTTTAGAAATGAGGTTACCCGGCTCGATGCCATTACGGCTATTTTGTGCGTCGAATCATCCATGACGACCTCAGCTTTAGTGGATAGTGTTGGGAATGCCTTGCACTCCAATTTTACGGAGAACCCAGATGAGGAATACGCAAAGCAAGAAATTTTGATCCTTGAGAAGCTGAAGTCGATGGAAGAATAGACATTACCATGATGGAAGGCGGAAAGAACCCTTTTCAAGGGCCGTCGTTTTGTTTTTGTTTTTGTTTTTTGAGAATCAAGATAGTCGACATCCTCACATGCTTGAAGTTGTAGATACCAAAAAATATATATGTCTGGCATCTGCGTACAATCACATTTGTTTCGAAGAAAAATTTGTAAGGACGTCCGAGATTATTTAGATAGTTATGCTTGTTTTGCTAGATTTCTGCTTGAGAATGTGAGATGATGTTGTTTCAACAATATCTTTAAATCCCCAGATAATTTATAATAATATACTATAATTTGAATTTATGTAA 2355 42.63 MDISLAAMDDPPTSPLKAFATFLIRHHSDQLNSLAHSPDPKLHYPIFVEFAELMDDDPPLARLLFSRPTEYLRIFDDAAVWAHKIILGDSKNGIKKDFIHVRINVTGSPLELAETFPSIGSVRVKHRGVLLTLKGTVIRSGAIKMYEGERWYICRKCKHKFPVYPELETRNSIQLPSFCPSQGAKPCEGKNFACLEGSVVRHDYQEIKIQESTQVLGVGSIPRAILVILKDDLVDLVKAGDDVIVTGVLSAKWSPDLKDVRCDLDPMLIANHVRRTNELKAEVDIPDDIIMKFRQFWSDFKDTPLKGRNAILRGICPQVFGLFTVKLAVALTLIGGVQHVDISGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGEWMLEAGALVLADGGLCCIDEVDSMREHDRATIHEAMEQQTISVAKAGLVTTLSTRTIVFGATNPKGHYDPEQRIIFTLFMWLNLITLRFDIVLVLLDTKNPEWDAVVSSHILTECEQEKGKCDNDLSSNWPLTMLRRYIQFVKGYFRPVLTEEAEQIISNYYQLQRRSAMDNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAITAILCVESSMTTSALVDSVGNALHSNFTENPDEEYAKQEILILEKLKSMEE 657
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 30690288 30756807 + XM_039030953.1 Bhi05g00891 35101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g00891 657 Gene3D - 146 202 - -
Bhi05g00891 657 Pfam MCM P-loop domain 309 513 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bhi05g00891 657 SUPERFAMILY Nucleic acid-binding proteins 43 258 IPR012340 -
Bhi05g00891 657 SMART AAA_5 349 499 IPR003593 -
Bhi05g00891 657 ProSiteProfiles MCM family domain profile. 307 511 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bhi05g00891 657 PANTHER DNA HELICASE MCM9 43 655 - -
Bhi05g00891 657 Gene3D - 121 251 IPR012340 -
Bhi05g00891 657 Pfam MCM AAA-lid domain 534 615 IPR041562 -
Bhi05g00891 657 Pfam MCM OB domain 121 251 IPR033762 -
Bhi05g00891 657 SMART mcm 115 617 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bhi05g00891 657 PRINTS Mini-chromosome maintenance (MCM) protein family signature 348 363 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bhi05g00891 657 PRINTS Mini-chromosome maintenance (MCM) protein family signature 406 420 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bhi05g00891 657 PRINTS Mini-chromosome maintenance (MCM) protein family signature 434 447 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bhi05g00891 657 PRINTS Mini-chromosome maintenance (MCM) protein family signature 457 469 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bhi05g00891 657 PRINTS Mini-chromosome maintenance (MCM) protein family signature 485 493 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bhi05g00891 657 Gene3D - 290 621 IPR027417 -
Bhi05g00891 657 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 317 620 IPR027417 -
Bhi05g00891 657 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 43 655 IPR031327 GO:0003677|GO:0005524|GO:0032508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g00891 Bhi-Chr5:30690288 Bhi11g01474 Bhi-Chr11:42860460 2.88E-74 dispersed
Bhi05g00890 Bhi-Chr5:30690288 Bhi05g00891 Bhi-Chr5:30690288 0 tandem
Bhi05g00891 Bhi-Chr5:30690288 Bhi05g00892 Bhi-Chr5:30690289 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g00891 K10738 - csv:101205171 1186.02