Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g00919 GAATTTGGAGAAATATGAGAAAAATAAAGACATGTTGATATGAATGGCTTCACCACCATTGGATCTGCCGATCTGCAAGTAAGATCAAATTCAACCAACCGTTTGTTTCAGCTCCTTCTTCTTCGCCATTTCTGCTTTCTTTTCTCCTCGCCGGCGCTGGTTCGCCGCCGGCTTCTCTCATTCCGGTGAACTTGAAGTGAATTGTAGTGGCATCAACCGTAAAAATCCCCCAAATTGAAGGTCATTTTCCAATCCACGTTATCTTCCTCCTTTTTCCATATCAAAATTCAGATTCCCATTTTGCCAATTCAATCTTCCATTCTCCTGTTCCTGCTGATTCTTTTTATCCAGCAGTTTCTACATTCACCCGTTTAATATTTCCTTGGGTTTTCTAGGGTTTACTTGTGCATTTTTCGGGATTGAATTTGGACTACGAATCGGTTTCTTGATTCCCAGTTTCTTTTGTGTTATTGGGCGGGGTTGATTGATTCTCCTTTTCGTTTTTTGGTAGAGCTATCTTGTTCGGAATTTGAAATCCGAGGCTTTGTATATTGTGAATTGTGAATTATCTGTTTTTCATCTAGAATTTTGCTTCTGAGATTTTCGATCATCTATTGTGTTTGGTCAATATATTTTTTGGGGTTTTCTTTTTCTTGGATTTTCTTGGGTTTCTTGTTAAATTAGCGTGTTCTTGGCCTTCCTATGTAATTCCGTAAGAAATGCCGAACTCCAATTTCCAAGACGCGATGTACGGTTCCGGAGTCATGAACAACGGTGGCCGGGATTTGGATAGCATTCAGAACCGAGTTGGCGACGAAGATGACGACATCAACGGCGGGGAAGAGTCTATAGATAACCCTCAGATGCGCTTCGAAGACTCTGGGGGAATGAGCGGCTCGGTCGCGGTAATGAACCGAGTCCAAGACGTTGTTCCTTCGGCGTATGTTTCCGGCTCTGATTACAACCCTTTGACTGGAAACGGCGGTGCTGACCAACTTACGCTGTCGTTCCGTGGGGACGTTTACGCTTTTGACTCTGTATCGCCGGACAAGGTGCAAGCCGTGCTTTTGCTTTTAGGTGGATATGAACTTCCTTCTGGTATTCCTGCAGTTGGAAGTGTTCCCGTCAACCAACAGGGTACAGATGGCTTTCCTGTCAGGTCGGTTCAACCACAAAGAGCTGCTTCATTGAGTAGGTTTAGAGAGAAGAGAAAAGAAAGGTGTTTCGAGAAGAAAATTCGTTACAGTGTGCGAAAGGAAGTTGCACTCAGAATGCAGCGGAAGAAGGGCCAGTTTATATCCTCTAAAGCTATTGGTGATGAAGTGGGTTCTTCTTCAGTTTTGTCTCAGACTTTGGATTCTGGACAAGATGATGGCTTGTTGGAAACCTCATGTACACATTGTGGAACCAGTTCAAAATCTACTCCAATGATGCGTCGTGGGCCTGCTGGTCCAAGGACTCTGTGCAATGCATGTGGGCTCAAGTGGGCCAATAAGGGAATTTTGAGGGATCTTTCCAAGGTATCAAACACTGGCATTCAAGAACCCTCTGCAAAAGAGACTGAACAGAGCGACGGCGAAGCTGCTAATGAATCCGATGCTGCAATTAATGTGGATATTCTCACTTCTAATGGTGATAAATAGGCTATAAACCACAAAAGGTAGATGTAAAAAAGTTGATTAACAGACTTTTTGCTTAGTGCTTGCTGGTTGAAGTTAGAGCATTCGAGTATTCCAACAAAATTATATGGAAATTCTTCATGCTCTGCTCTGTGCACTTTAGAGAGTATAAGAAGAACCAAAAACAATAAAAGAATTGCTTTCACCATTAGTCACCAATCATGTAGCTGAAAATAGATGGGATTCAGAGGGTGGGTGGTGAAAGATTTTGCGGTCTTCAATGGCCTTTTGGTCAAACTAGAAGAAGAAGCTTCTCACTTATAAGAAGCTCCGATCAAAGGCTGATGAGTTGAGTTGCCTCCACTTGATGATATGAAATTAGTAATGTTATCTTATTCTTCTTCTACAATGTCTGAAGATGTATATGCAATCTTCCCCATGTAAAAAGGGCAATTAAATACTTCAGATCACTTTTTTTTTTTTTTTTTTTTTTTTGCGCTCATTTTTACACCCTTATTTTTCATTTTCTTATTTATAGCCTAGAAGTAAATAATATGTAGTGTAATTTCTGACCTCTTACCAGGGGTAATTTAGTTACTTTGTATGTGAGGGTACAATAATTTCATCTTCTTGCTTTTCATCTTTCCCTTATGGTATGAGAAGTTGAAGATTCGTTGATGTATTCGTAAA 2309 40.97 MPNSNFQDAMYGSGVMNNGGRDLDSIQNRVGDEDDDINGGEESIDNPQMRFEDSGGMSGSVAVMNRVQDVVPSAYVSGSDYNPLTGNGGADQLTLSFRGDVYAFDSVSPDKVQAVLLLLGGYELPSGIPAVGSVPVNQQGTDGFPVRSVQPQRAASLSRFREKRKERCFEKKIRYSVRKEVALRMQRKKGQFISSKAIGDEVGSSSVLSQTLDSGQDDGLLETSCTHCGTSSKSTPMMRRGPAGPRTLCNACGLKWANKGILRDLSKVSNTGIQEPSAKETEQSDGEAANESDAAINVDILTSNGDK 307
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 32241302 32248500 - XM_039032034.1 Bhi05g00919 35129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g00919 307 PANTHER GATA TRANSCRIPTION FACTOR 18 1 300 - -
Bhi05g00919 307 Pfam GATA zinc finger 225 260 IPR000679 GO:0006355|GO:0043565
Bhi05g00919 307 ProSitePatterns GATA-type zinc finger domain. 225 252 IPR000679 GO:0006355|GO:0043565
Bhi05g00919 307 PANTHER GATA TRANSCRIPTION FACTOR 28 1 300 IPR045280 GO:0006355
Bhi05g00919 307 MobiDBLite consensus disorder prediction 1 50 - -
Bhi05g00919 307 Pfam tify domain 90 120 IPR010399 -
Bhi05g00919 307 ProSiteProfiles Tify domain profile. 86 121 IPR010399 -
Bhi05g00919 307 ProSiteProfiles GATA-type zinc finger domain profile. 224 276 IPR000679 GO:0006355|GO:0043565
Bhi05g00919 307 SMART tify_2 86 121 IPR010399 -
Bhi05g00919 307 MobiDBLite consensus disorder prediction 267 307 - -
Bhi05g00919 307 Pfam CCT motif 153 195 IPR010402 GO:0005515
Bhi05g00919 307 ProSiteProfiles CCT domain profile. 153 195 IPR010402 GO:0005515
Bhi05g00919 307 CDD ZnF_GATA 224 274 IPR000679 GO:0006355|GO:0043565
Bhi05g00919 307 Gene3D - 221 286 IPR013088 GO:0006355|GO:0008270
Bhi05g00919 307 SMART GATA_3 219 272 IPR000679 GO:0006355|GO:0043565
Bhi05g00919 307 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 222 271 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g00919 Bhi-Chr5:32241302 Bhi09g00226 Bhi-Chr9:4919810 1.85E-73 dispersed
Bhi05g00918 Bhi-Chr5:32241302 Bhi05g00919 Bhi-Chr5:32241302 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1165 PF06203 CCT 1.60E-15 CL0281 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g00919 - - csv:101222542 560.451