Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g00928 TGTATATTGGATTTAATCACGCCTCTTTATCTTTCTCCAATTCAACAAGATCGGAGAAGAGACAACAATGGAGAAGACCCCAAACACTCACGCTACAGATGGAGAGCTCAACGATGGAAAAGACGCCATTAACAATGGCTCCGTCTGTGGTTACGATTCTCTTCATCGACTCCTTGCTGCAAATCTCAAGCCTCAGATATTTCAGGAAGTTAGCCGGTTGCTATTAGGGCTTAACTGTGGAAAGCCGCTTCAAACTATTTCTCTTGCAGAGCCTGTAAATAGTCTTTCTCTAGAGCACGATTTTGACCTCCAGGCTTTCCGCTTTCATGCTGATAAGGAATCAGTGAGAGAACCTCGAATAGTACGAGTGGGTCTTATTCAAAATTCAATTGCTCTTCCAACAACTGCCCCCTTTTTAGACCAAAACAGGGCTATTCTTGAGAAAGTAAAGCCAATTATTGATGCAGCAGGTGCTTCTGGAGTCAACATATTATGCTTGCAAGAAGCATGGATGATGCCATTTGCTTTTTGTACCCGTGAAAAGCGGTGGTGTGAATTTGCAGAGCCAATCGATGGGGAATCAACACGGTTTCTTCAGGATCTTGCATTAAAATACAACATGGTCATTGTAAGTTCCATTCTCGAGAGAGATGTTAGTCATGGGGATACTCTATGGAATACTGCTGTTGTTATTGGTAATCATGGAAACATAATTGGCAAGCATCGCAAGAACCATATACCAAGAGTTGGCGACTTTAACGAGAGCACATATTACATGGAAGGGAACACCGGGCATCCTGTGTTCGAGACAGCCTACGGGAAGATTGGAATAAATATATGTTACGGGAGGCACCACCCTTTAAACTGGTTAGCTTTTGGCTTAAATGGTGCCGAGATCGTTTTCAACCCTTCTGCAACTGTTGGTGAACTCAGTGAACCAATGTGGCCTATTGAGGCTCGAAATGCGGCAATAGCAAATAGTTATTTTGTCGGATCGATCAATCGTGTTGGGACTGAGATTTTCCCAAACCCATTCACTTCAGGCGATGGGAAACCACAACATACAGATTTTGGTCACTTCTACGGGTCCAGCCATTTCTCTGCACCAGATGCATCTTGCACTCCCTCACTCTCCCGTTACCGGGATGGTTTATTAATCTCCGACATGGATCTTAACTTGTGTAGGCAGCTGAAAGATAAATGGGGATTCCGAATGACTGCTCGGTACGAGGTGTATGCCGAAATACTTGCTCGGTATCTAAAACCTGACTTTGAGCCTCAGGTCATTTCTGATCCTTTGTTACACAAGAAGGCTTCTTGAAGTATAGTCAATTGGAAAGTTTAGAAAAGAAGTCATTATGTAAGTTAAACTTGTTGAATAATTTATAATCCAATGTGAAAAGTAAGCTCACTTCCCTTTTGTTTGTAATCTTTGCCCATAATTTTACCTGTTTGTAGACAAACTTACTGGGAAAAAAAGAAATAAGAAAGGCATGCTGCTGATGGATGGAAAATGATATTGGTCTTGAGTTGTT 1535 42.08 MEKTPNTHATDGELNDGKDAINNGSVCGYDSLHRLLAANLKPQIFQEVSRLLLGLNCGKPLQTISLAEPVNSLSLEHDFDLQAFRFHADKESVREPRIVRVGLIQNSIALPTTAPFLDQNRAILEKVKPIIDAAGASGVNILCLQEAWMMPFAFCTREKRWCEFAEPIDGESTRFLQDLALKYNMVIVSSILERDVSHGDTLWNTAVVIGNHGNIIGKHRKNHIPRVGDFNESTYYMEGNTGHPVFETAYGKIGINICYGRHHPLNWLAFGLNGAEIVFNPSATVGELSEPMWPIEARNAAIANSYFVGSINRVGTEIFPNPFTSGDGKPQHTDFGHFYGSSHFSAPDASCTPSLSRYRDGLLISDMDLNLCRQLKDKWGFRMTARYEVYAEILARYLKPDFEPQVISDPLLHKKAS 417
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 32477499 32481725 - XM_039033138.1 Bhi05g00928 35138

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g00928 417 PANTHER NITRILASE C965.09-RELATED 18 411 - -
Bhi05g00928 417 Pfam Carbon-nitrogen hydrolase 107 376 IPR003010 GO:0006807
Bhi05g00928 417 Gene3D - 25 410 IPR036526 -
Bhi05g00928 417 PANTHER BNAANNG15120D PROTEIN 18 411 - -
Bhi05g00928 417 SUPERFAMILY Carbon-nitrogen hydrolase 94 385 IPR036526 -
Bhi05g00928 417 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 99 369 IPR003010 GO:0006807
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g00928 K01431 UPB1, pydC; beta-ureidopropionase [EC:3.5.1.6] - csv:101223016 811.216
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g00928 Bhi-Chr5:32477499 Bhi08g00020 Bhi-Chr8:1230167 8.23E-28 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g971 . . . . . . . . . . . . . . . . . Bhi05g00928 . . . . . . . . . . . . . . . . . . Csa07g00588 . Cme01g00208 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Chy01g00222 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008913 1 1 1 2 0 1 2 1 1 1 1 1 1 1 1 3 1 1 2 1 1 1 1 1 1 0 0 1 2 1 33
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi05g00928 Bhi_Chr05 FPKM 1.769711 2.895221 0.0 0.0 0.0 0.0 0.0 0.274247 0.318009 0.490097