Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g00953 AAGAGGACCCACCGCTCGTGTTAACCAAAACATTGTCCAGCTCCAGCTTTTGCTTGTAAACAGTCAAAATCTCTCGATACCGCTCGTGTGAGAGTGTGATCATCTTCATCTTCAATCGGCGCCGGAGAAAAATGTTGCAGTCTTCGATTTGGCGAGTGAAAAAATTGAGTCTTCTGAGACCTCAGATCTTTGCTCTTGGAAATTCTCGTTTCTCCACCTTTGCTGAACCGTCTTCCAAGCCTAATCCGCCGAGGGTTCCAAATCTCATAGGAGGGACTTTTGTTGATTCTCGATCCTCAGCATTCATAGATGTCATAAACCCAGCAACACAAGAAGTTGTTTCTCAAGTTCCATTGACCACAAATGATGAATTTAAAGCTGCAGTGTCTGCAGCAAAGCAGGCTTTTCCTGCATGGCGTAATACTCCAGTTACAACTCGTCAACGAATTATGTTCAAGCTTCAAGAACTTATTAGGCGAGATATAGACAAACTTGCTCTAAATATTACCACAGAACAAGGAAAAACGTTAAAGGATGCACATGGAGATGTATTCCGTGGGCTAGAGGTTGTGGAACATGCATGTGGAATGGCATCTCTGCAAATGGGGGAGTATGTCTCTAATGTGTCACATGGAATTGATACCTACAGCATCAGAGAGCCTCTTGGTGTTTGTGCTGGGATTTGTCCGTTCAACTTTCCAGCCATGATCCCCCTATGGATGTTCCCAATTGCTGTTACATGTGGGAATACCTTTGTTTTGAAGCCTTCAGAAAAAGATCCAGGGGCTTCTATAATCCTTGCAGAGTTAGCAATGGAGGCTGGATTGCCTGATGGTGTCCTAAATGTGGTTCATGGTACTAATGATGTTGTTAATGCCATTTGTGATGATGAAGATATAAAAGCAATATCATTTGTCGGTTCAAACATTGCGGGCATGCATATATATTCAAGGGGATCAGCTAAAGGAAAACGTGTTCAGTCCAATATGGGTGCAAAAAATCATGCAATTGTCTTGCCCGATGCCAGCACTGATGCTACTTTGAATGCTTTGGTTGCTGCTGGTTTTGGTGCTGCTGGACAAAGATGCATGGCCCTTAGTACAGTTGTCTTTGTTGGAGACTCCAAATTGTGGGAGGAAAAACTTGTAGAACGTGCCAAAACACTGAAGGTAAACTCTGGAACAGAACCTGATGCAGATCTTGGTCCAGTAATTAGCAAGCAGGCAAAGGATAGGATTCACAGATTGGTTCAGTCTGGCATCGATAGTGGAGCCAGGCTACTGCTAGATGGGAGAAATATAGTGGTCCCTGGATACGAGTATGGAAATTTTATTGGACCTACTATCTTAACAGATGTGACGCCGGACATGGAGTGCTACAAGGAAGAAATATTTGGCCCAGTTCTGCTTTGCATGCAGGCTGAAAGTTTAGAGGAGGCCATTAGCATCGTTAACGGAAATAGGTATGGCAATGGAGCTTCCATATTCACCACATCTGGGATAGCGGCGAGGAAGTTTCAAACAGATATTGAAGCTGGACAGGTTGGGATCAACGTTCCGATTCCAGTTCCGTTGCCCTTCTTCTCGTTCACCGGCTCCAAGGCATCTTTTGCTGGGGATCTCAATTTTTATGGCAAGGCTGGAGTCAACTTCTTCACACAGATCAAAACAGTGACACAACAATGGAAAGACTCAGCTGGGGGAACTACAGTCAACCTTGCAATGCCAACCTCTTTGAAGTCATAGGTTACCTTTCAACTTATTGTAATCACTCTTAAATAAACTTTATGCAGCTATTTTCAGTGCACATATAAATAAATACTTTTTTTTTTCCCA 1835 43.38 MLQSSIWRVKKLSLLRPQIFALGNSRFSTFAEPSSKPNPPRVPNLIGGTFVDSRSSAFIDVINPATQEVVSQVPLTTNDEFKAAVSAAKQAFPAWRNTPVTTRQRIMFKLQELIRRDIDKLALNITTEQGKTLKDAHGDVFRGLEVVEHACGMASLQMGEYVSNVSHGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPIAVTCGNTFVLKPSEKDPGASIILAELAMEAGLPDGVLNVVHGTNDVVNAICDDEDIKAISFVGSNIAGMHIYSRGSAKGKRVQSNMGAKNHAIVLPDASTDATLNALVAAGFGAAGQRCMALSTVVFVGDSKLWEEKLVERAKTLKVNSGTEPDADLGPVISKQAKDRIHRLVQSGIDSGARLLLDGRNIVVPGYEYGNFIGPTILTDVTPDMECYKEEIFGPVLLCMQAESLEEAISIVNGNRYGNGASIFTTSGIAARKFQTDIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFFTQIKTVTQQWKDSAGGTTVNLAMPTSLKS 537
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 33483089 33492080 - XM_039032443.1 Bhi05g00953 35163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g00953 537 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL-LIKE 15 534 - -
Bhi05g00953 537 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 61 495 IPR016162 GO:0016491
Bhi05g00953 537 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 287 487 IPR016163 GO:0016620
Bhi05g00953 537 SUPERFAMILY ALDH-like 37 519 IPR016161 GO:0016491
Bhi05g00953 537 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 44 518 IPR010061 GO:0004491
Bhi05g00953 537 CDD ALDH_F6_MMSDH 42 518 IPR010061 GO:0004491
Bhi05g00953 537 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 15 534 IPR010061 GO:0004491
Bhi05g00953 537 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 312 323 IPR016160 GO:0016491
Bhi05g00953 537 Pfam Aldehyde dehydrogenase family 50 514 IPR015590 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01706 Bhi-Chr3:35906489 Bhi05g00953 Bhi-Chr5:33483089 0 dispersed
Bhi03g01707 Bhi-Chr3:35907704 Bhi05g00953 Bhi-Chr5:33483089 0 dispersed
Bhi05g00953 Bhi-Chr5:33483089 Bhi10g00929 Bhi-Chr10:19072439 4.30E-62 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g00953 K00140 - csv:101204924 1021.92