Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01043 ATGGCTCAATTACTCTTCAACAATATTACACCTTCCTCAGCTGATCCTTTCATGGCTTCCCTTCCTTATGAAACACCTTCTTCTTCAACCTTTTATACCCTTTCACAAGAGACTAGTGATGGAAACTATTGCAGCCAATTATTATTCCCCACTAATGAAAATAATAATAATTATTATTATTGCAATCCCATGAACAACAATAATAATAATCATGATTTTTCATTGGGGGAGCTTGGAAATTATTACAATAACAATGGTAGTAATTTCCACCTTGAAGATCATGAAGACTCTATTAATTTAGAGGTGAGTGAGAATCATTTGCAGCCTTGTTCTGAAGCTGAGTTGATGAAATTACCTGAAGAAGCTGCCCAATTTGAGATCAATTGCAAGAAAAGATCAAGGGCAGGATTTGGGGATAATCATGTACAAAAGGAGAGGAATGAGAGGCCAAAGAAAACTCAAAAGCTTATTACCTCAAGCAGCATTAACACTGAAGAAGATGGCAATCCTGGCCCTAGCAGACAAAGCACAAGCAACTATTGTTCTGAAGACGAATCCAATGCCTCTCTCGATCGAAACGGAGGAGCTAATAACTTGGGATCGAGTCCGAACGGGCCGACCAAATCCCGAGCTAGCAGAGGCTCAGCCACAGATCCACAGAGCCTCTATGCAAGGAAAAGAAGAGAAAGAATCAATGAAAGGTTGAGAATCTTACAGAATCTTGTCCCAAATGGAACAAAGGTTGATATCAGCACAATGCTTGAGGAAGCTGTTCAATATGTGAAGTTTCTACAACTCCAAATCAAGCTATTAAGCTCTGATGATTTATGGATGTATGCTCCAATCGCTTACAATGGAATGGATATCGGACTTAACCCGACGACCCTGAAAACACCAAAAGAGAAAGAATTATGA 915 39.34 MAQLLFNNITPSSADPFMASLPYETPSSSTFYTLSQETSDGNYCSQLLFPTNENNNNYYYCNPMNNNNNNHDFSLGELGNYYNNNGSNFHLEDHEDSINLEVSENHLQPCSEAELMKLPEEAAQFEINCKKRSRAGFGDNHVQKERNERPKKTQKLITSSSINTEEDGNPGPSRQSTSNYCSEDESNASLDRNGGANNLGSSPNGPTKSRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNPTTLKTPKEKEL 304
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 37142172 37144200 + XM_039031614.1 Bhi05g01043 35253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01043 304 MobiDBLite consensus disorder prediction 154 219 - -
Bhi05g01043 304 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 215 264 IPR011598 GO:0046983
Bhi05g01043 304 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 215 281 IPR036638 GO:0046983
Bhi05g01043 304 Gene3D - 214 272 IPR036638 GO:0046983
Bhi05g01043 304 SMART finulus 221 270 IPR011598 GO:0046983
Bhi05g01043 304 PANTHER TRANSCRIPTION FACTOR BHLH139-LIKE 11 292 - -
Bhi05g01043 304 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 11 292 - -
Bhi05g01043 304 Pfam Helix-loop-helix DNA-binding domain 225 265 IPR011598 GO:0046983
Bhi05g01043 304 MobiDBLite consensus disorder prediction 137 153 - -
Bhi05g01043 304 CDD bHLH_AtIND_like 216 278 - -
Bhi05g01043 304 MobiDBLite consensus disorder prediction 137 227 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01043 Bhi-Chr5:37142172 Bhi11g01138 Bhi-Chr11:33718223 8.70E-63 dispersed
Bhi05g01043 Bhi-Chr5:37142172 Bhi04g00411 Bhi-Chr4:10618267 4.81E-59 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1176 PF00010 HLH 1.10E-08 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01043 - - cmo:103495305 401.749