Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01056 GCCGCTAAGATTTGAAATTCATGAAAATGGCGGCATTTCTCCCTCCTCTTCCTCTCTATTTCACCACCAACTCCATTCTTTCACCAATGGATTCTCCAAGATTCTCCTCCTCCTCCTCCGTTTGCCTTCTCCGGCAAACTTTGCGACTTCCACATTATCTATCCGCCTTTCGGAATCGGATTCTTTCCGTCTCCCATGGACTCGGCGGAGTACCACAAGCCATCCGTCCGAGCGTCGAAGAAGCGCGAGTCGGAGGAGCACTCTTTGCAACAGGCCACTGCCAACAAGAGACCCGTGCTTGGCGAGATTACTAACTCATTGATCTTCAGTTCGAGCCAGTGCTCCTTTTCTGATCAGGAGATGACGGATAAGGATCTGGACAAGGAGGAACTCCCTGAAGGAATGTCTGTTGATTGTTCAGAGAAATCTGGCTCTGCATTTAGCATCTATAGCCATCTTCGATCTCTGGAGATGGAATTACACATGAAGTTACTGCCCAACAACATTGAAAAGGCTCACAATAGCGATTCCAGTTTAACTTTCACTCGTATGCGAGAAATTCTAGTGGATTGGTTAGTAGAGGTTGCTGAGGAATACAAGCTTGTATCAGACACCCTATATCTCACCATATCACATATTGACAGATACTTATCCTGGCATGCTATTGACAGAAGCAAGCTACAACTTCTTGGTGTTTGCTGCATGCTAATTGCATCGAAGCATGAGGAGATCAGTCCTCCACATGTTGAAGACTTCTGCTATATAACAGATAATACATATACCAGAGAACAGGTACTAAATATGGAGAGAGAAGTACGCACATTCTTGACCTGTGAAGGCGCCCCCACGATAAAAGTTTTCCTCAGAATATTTACAAAAGTTGCTCTAGAAAATTGGAAGCAGGCTCCGGATTTGGAATTTGAGTTGTTGAGTTGTTATCTTGCGGAGCTAAGTTTGTTAGATTACCTTTGTATGCAATTCTTACCTTCAAAAGTCGCAGCATCAGCCATTTTTCTTTCTAGATTCACAATCCAACCAGAGAAACATCCTTGGTGTTCAGTACTACAACATTACTCCGGTTTCAGGCCATCTGAACTAAAGGAATGCATTCTTGCCATTCATGACTTACAATTAAATAGAAAAGGAAGCTCTTTACTAGCAATCAGAGACAAGTACAAGCAGCATAAGTTCAAGTGTGTGGCCAAGTTATCTTCTCCCTCAGAAATTCCTGCATGTTATTTTGAGGACATTGATCAGCAATCATTCAGCAGGTTCTTAAGAACTTAATTCTTTGATGCTTTGAAGCTCAAACCCTTTTCTCTTCCCTTTGCTAGCATAACATGCACAGTAACCATGCACAAATAATAAGAACTAGGTACTTGTTAGATAGATCATAAAAGATATTTTTTTTGTTCTTTTGGTTTCTCTCTCTCTCTTCATTGTAGCCTCTTTTCTTCATTGTAAGAATGCAATTGAATCATAATGAAGGCTTTACTCCCCCCTTTCTTTTCTTTTAGTTTCTATCTCCAAGAATTGTATAAATCATACATTTGTATTCAAGGTAAAGAGGGGAAATTTCTACTGCTACATTATTATGGATAATTTTTTTTCTT 1613 40.79 MDSAEYHKPSVRASKKRESEEHSLQQATANKRPVLGEITNSLIFSSSQCSFSDQEMTDKDLDKEELPEGMSVDCSEKSGSAFSIYSHLRSLEMELHMKLLPNNIEKAHNSDSSLTFTRMREILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEISPPHVEDFCYITDNTYTREQVLNMEREVRTFLTCEGAPTIKVFLRIFTKVALENWKQAPDLEFELLSCYLAELSLLDYLCMQFLPSKVAASAIFLSRFTIQPEKHPWCSVLQHYSGFRPSELKECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAKLSSPSEIPACYFEDIDQQSFSRFLRT 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 38156413 38159982 + XM_039032641.1 Bhi05g01056 35266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01056 363 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 283 363 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bhi05g01056 363 MobiDBLite consensus disorder prediction 1 25 - -
Bhi05g01056 363 PANTHER CYCLIN-A3-1-LIKE 27 351 - -
Bhi05g01056 363 PIRSF Cyclin_A_B_D_E 2 347 IPR039361 -
Bhi05g01056 363 Pfam Cyclin, C-terminal domain 217 340 IPR004367 -
Bhi05g01056 363 CDD CYCLIN 217 309 IPR013763 -
Bhi05g01056 363 CDD CYCLIN 119 207 IPR013763 -
Bhi05g01056 363 SMART Cyclin_C_2 217 341 IPR004367 -
Bhi05g01056 363 SMART cyclin_7 221 310 IPR013763 -
Bhi05g01056 363 SMART cyclin_7 125 209 IPR013763 -
Bhi05g01056 363 Pfam Cyclin, N-terminal domain 85 211 IPR006671 -
Bhi05g01056 363 SUPERFAMILY Cyclin-like 85 212 IPR036915 -
Bhi05g01056 363 MobiDBLite consensus disorder prediction 1 32 - -
Bhi05g01056 363 Gene3D - 84 337 - -
Bhi05g01056 363 Gene3D - 97 215 - -
Bhi05g01056 363 SUPERFAMILY Cyclin-like 217 343 IPR036915 -
Bhi05g01056 363 PANTHER CYCLINS 27 351 IPR039361 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01056 Bhi-Chr5:38156413 Bhi09g03255 Bhi-Chr9:83471183 7.57E-115 dispersed
Bhi05g01056 Bhi-Chr5:38156413 Bhi05g01057 Bhi-Chr5:38156413 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01056 K06627 - csv:101213896 617.461