Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01057 GCCGCTAAGATTTGAAATTCATGAAAATGGCGGCATTTCTCCCTCCTCTTCCTCTCTATTTCACCACCAACTCCATTCTTTCACCAATGGATTCTCCAAGATTCTCCTCCTCCTCCTCCGTTTGCCTTCTCCGGCAAACTTTGCGACTTCCACATTATCTATCCGCCTTTCGGAATCGGATTCTTTCCGTCTCCCATGGACTCGGCGGAGTACCACAAGCCATCCGTCCGAGCGTCGAAGAAGCGCGAGTCGGAGGAGCACTCTTTGCAACAGGCCACTGCCAACAAGAGACCCGTGCTTGGCGAGATTACTAACTCATTGATCTTCAGTTCGAGCCAGTGCTCCTTTTCTGATCAGGAGATGACGGATAAGGATCTGGACAAGGAGGAACTCCCTGAAGGAATGTCTGTTGATTGTTCAGAGAAATCTGGCTCTGCATTTAGCATCTATAGCCATCTTCGATCTCTGGAGATGGAATTACACATGAAGTTACTGCCCAACAACATTGAAAAGGCTCACAATAGCGATTCCAGTTTAACTTTCACTCGTATGCGAGAAATTCTAGTGGATTGGTTAGTAGAGGTTGCTGAGGAATACAAGCTTGTATCAGACACCCTATATCTCACCATATCACATATTGACAGATACTTATCCTGGCATGCTATTGACAGAAGCAAGCTACAACTTCTTGGTGTTTGCTGCATGCTAATTGCATCGAAGCATGAGGAGATCAGTCCTCCACATGTTGAAGACTTCTGCTATATAACAGATAATACATATACCAGAGAACAGGTACTAAATATGGAGAGAGAAGTACGCACATTCTTGACCTGTGAAGGCGCCCCCACGATAAAAGTTTTCCTCAGAATATTTACAAAAGTTGCTCTAGAAAATTGGAAGGCTCCGGATTTGGAATTTGAGTTGTTGAGTTGTTATCTTGCGGAGCTAAGTTTGTTAGATTACCTTTGTATGCAATTCTTACCTTCAAAAGTCGCAGCATCAGCCATTTTTCTTTCTAGATTCACAATCCAACCAGAGAAACATCCTTGGTGTTCAGTACTACAACATTACTCCGGTTTCAGGCCATCTGAACTAAAGGAATGCATTCTTGCCATTCATGACTTACAATTAAATAGAAAAGGAAGCTCTTTACTAGCAATCAGAGACAAGTACAAGCAGCATAAGTTCAAGTGTGTGGCCAAGTTATCTTCTCCCTCAGAAATTCCTGCATGTTATTTTGAGGACATTGATCAGCAATCATTCAGCAGGTTCTTAAGAACTTAATTCTTTGATGCTTTGAAGCTCAAACCCTTTTCTCTTCCCTTTGCTAGCATAACATGCACAGTAACCATGCACAAATAATAAGAACTAGGTACTTGTTAGATAGATCATAAAAGATATTTTTTTTGTTCTTTTGGTTTCTCTCTCTCTCTTCATTGTAGCCTCTTTTCTTCATTGTAAGAATGCAATTGAATCATAATGAAGGCTTTACTCCCCCCTTTCTTTTCTTTTAGTTTCTATCTCCAAGAATTGTATAAATCATACATTTGTATTCAAGGTAAAGAGGGGAAATTTCTACTGCTACATTATTATGGATAATTTTTTTTCT 1609 40.77 MDSAEYHKPSVRASKKRESEEHSLQQATANKRPVLGEITNSLIFSSSQCSFSDQEMTDKDLDKEELPEGMSVDCSEKSGSAFSIYSHLRSLEMELHMKLLPNNIEKAHNSDSSLTFTRMREILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEISPPHVEDFCYITDNTYTREQVLNMEREVRTFLTCEGAPTIKVFLRIFTKVALENWKAPDLEFELLSCYLAELSLLDYLCMQFLPSKVAASAIFLSRFTIQPEKHPWCSVLQHYSGFRPSELKECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAKLSSPSEIPACYFEDIDQQSFSRFLRT 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 38156413 38159981 + XM_039032642.1 Bhi05g01057 35267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01057 362 MobiDBLite consensus disorder prediction 1 25 - -
Bhi05g01057 362 SMART cyclin_7 221 309 IPR013763 -
Bhi05g01057 362 SMART cyclin_7 125 209 IPR013763 -
Bhi05g01057 362 PIRSF Cyclin_A_B_D_E 2 346 IPR039361 -
Bhi05g01057 362 Pfam Cyclin, N-terminal domain 85 211 IPR006671 -
Bhi05g01057 362 CDD CYCLIN 119 207 IPR013763 -
Bhi05g01057 362 Gene3D - 84 336 - -
Bhi05g01057 362 Pfam Cyclin, C-terminal domain 217 339 IPR004367 -
Bhi05g01057 362 SUPERFAMILY Cyclin-like 85 212 IPR036915 -
Bhi05g01057 362 MobiDBLite consensus disorder prediction 1 32 - -
Bhi05g01057 362 PANTHER CYCLIN-A3-1-LIKE 27 350 - -
Bhi05g01057 362 PANTHER CYCLINS 27 350 IPR039361 -
Bhi05g01057 362 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 282 362 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bhi05g01057 362 SUPERFAMILY Cyclin-like 217 342 IPR036915 -
Bhi05g01057 362 SMART Cyclin_C_2 217 340 IPR004367 -
Bhi05g01057 362 Gene3D - 97 215 - -
Bhi05g01057 362 CDD CYCLIN 217 308 IPR013763 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01057 Bhi-Chr5:38156413 Bhi09g03255 Bhi-Chr9:83471183 2.64E-116 dispersed
Bhi05g01056 Bhi-Chr5:38156413 Bhi05g01057 Bhi-Chr5:38156413 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01057 K06627 - csv:101213896 622.083