Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01064 CAAAAAAGCAAAGGGATTAGGTACTCATCTCTTAAGCGTAGACTTGAAAAACGACCAAAGTCTATGCTCTTCCTTCAAAATCGTATTCTCTTGATTGAAGAAGACGAAACCATTGACACCCCAGCAAAGCCCACTTGACTTTTCATCATTCCCTCTTCTTCTGCTCTGACCCAATTGGCCATCACTATGGCTATGGCTTCAACAGAGCTTAAATGTTGAAAACACGTCAATTCCACACTATTTATCAGCAACCCATTTCTCCTTCTTTTCGTTTTCTCCCCCCAAATCTCTTTAACTCCTCGATTTGCCAGATGGGTATCTTTTCAAAGCAAAAAATCTGGAGAGCGGGAACGACCCATGATGATTCGATGGGATTTAATGGGGTTCCTGCAACGAGCAAGAGGAAATGGACTCGTTTTTTGCCTTTGTTTGTGGCCATTGTGGTTATAGCAGAGATCACTTCTTTGAGTCGGCTTGACATGGCGAAAAATGCGGCTATGGTGGATTCTTGGGTCGACTTGTTTTATGGATCTCCGGTTTTGCAAGAAGGGAATGAAGGTGGTAGTAAATTGGGCACGGGAATGTCTATTGATGATGGAGAAATTGATAGAGTTAGGTGTGAGGAGTGGCTGGAGAAGGAGGATGCTGTGGAGTATTCTAGGGACTTCAAAAGGGAACCTGTTTTGGTTTCTGGTTCCGAGAAGGAGTGGAGAACTTGTGATGTGGGATGCCAGTTTGGATTTAATCCTGGCCAGCAGCCTGATGCTATATTCGGATCGCCTCAACAAGGTAGTGCTGCTAGCGTACTTCGATCCATGGAGTCATCGCATTACTATCCAGAGAACAATATTGCTTTGGCAAGACGGTGGGAAGGGTTATACCGTGGTTATGACCACTAGTGTATCATCAGATGTCCCTGTTGGATATTTTTCTTGGGCAGAATACGAGATAATGGCACCAGTACAGCCAAAGACTGAGCCTGCCCTTGCAGCTGCCTTCATTTCAAATTGTGGTGCCCGAAACTTCCGTTTGCAAGCTCTTGATGCGCTTGAGAAGTTGAATGTCAAAATTGATTCATATGGTAGTTGCCACAGGAACCACGATGGACGAGTTGACAAGGTGGAAACTTTGAAGCGCTACAAGTTCAGCTTGGCTTTTGAGAATTCCAATGAGGAAGATTATGTCACGGAAAAGTTTTTCCAATCTCTTGTTGCAGGAACTATTCCGGTGGTGGTTGGTGCTCCAAATATCGAGGAGTTTGCTCCTTCTCCTGATTCATTTTTGCATATCAAGGAATTCTCCGATGTTGAGTCAATTGCCAAGTCCATGAAATACCTTGCTGAAAATCCCAAATTGTACAATCAATCCCTAAGATGGAAGTACGACGGTCCATCTGAGTCTTTCAAGGCCCTTGTCGATATGGCAGCCGTACACTCATCCTGCCGCCTTTGCATCCACATGGCAACCATCATCCATGAGAAAGAAGAAAACAGTCCCAGGTTCAAGAAACGACCGTGCAAATGTTCTCGAGGCTCTGAAACTGTATATCATTTATATGTAAGGGAGAGAGGGAGGTTTGAAATGCAATCCATTTTCTTGAGGTCAGGAAATTTGACATTGGAGGCTTTAGAATCAAGGGTACTCGAAAACTTCAATTCTTTGAAACACGTACCGATTTGGAAGCAAGAACGGCCCGAAAGCATAAGAGGAGGAGATGAACTAAAACTATATAGAATATATCCTGTTGGGTTGACTCAGAGGCAGGCTTTATATACCTTCAGATTCGAAGGCAATGATCATTTCAGAACTCACATAGAAACACACCCTTGTGCAAAGATGGAAGTCATATTTGTTTGAGTCTAAATCATCTTCCGAGCGCATCCGATATGCGATTAACTCGTTCATCATTGGACGTATAATTTGTATAACATAGTTGCTGAACTAATGTAAGTTTAGGGTGCAACAAGACGAGAGCAGAAACCTAGCAATGGCTGCCAAATGGGGGTTTCCTTTGATCAGCTAATTACAGATCATGCGCTCTTGTAAATGTTGAGAACAGAATTGGCCTTTGTGGGCGTGATGCATATTTTGCTAGTTGAATCTAGCCAATTCCACGAACAATCCTCTTCTTATTTTCTCA 2140 43.27 MRLWWILGSTCFMDLRFCKKGMKVVVNWARECLLMMEKLIELGVRSGWRRRMLWSILGTSKGNLFWFLVPRRSGELVMWDASLDLILASSLMLYSDRLNKVVLLAYFDPWSHRITIQRTILLWQDGGKGYTVVMTTSVSSDVPVGYFSWAEYEIMAPVQPKTEPALAAAFISNCGARNFRLQALDALEKLNVKIDSYGSCHRNHDGRVDKVETLKRYKFSLAFENSNEEDYVTEKFFQSLVAGTIPVVVGAPNIEEFAPSPDSFLHIKEFSDVESIAKSMKYLAENPKLYNQSLRWKYDGPSESFKALVDMAAVHSSCRLCIHMATIIHEKEENSPRFKKRPCKCSRGSETVYHLYVRERGRFEMQSIFLRSGNLTLEALESRVLENFNSLKHVPIWKQERPESIRGGDELKLYRIYPVGLTQRQALYTFRFEGNDHFRTHIETHPCAKMEVIFV 455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 38443637 38449709 - XM_039032082.1 Bhi05g01064 35274

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01064 455 Gene3D - 132 304 IPR038577 -
Bhi05g01064 455 PANTHER GLYCOPROTEIN 3-ALPHA-L-FUCOSYLTRANSFERASE A 124 432 - -
Bhi05g01064 455 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 102 331 - -
Bhi05g01064 455 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 165 326 IPR001503 GO:0006486|GO:0008417|GO:0016020
Bhi05g01064 455 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 124 432 IPR001503 GO:0006486|GO:0008417|GO:0016020
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01064 K00753 E2.4.1.214; glycoprotein 3-alpha-L-fucosyltransferase [EC:2.4.1.214] - csv:101205170 642.884
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01671 Bhi-Chr1:34979805 Bhi05g01064 Bhi-Chr5:38443637 8.77E-146 dispersed
Bhi04g01632 Bhi-Chr4:40566136 Bhi05g01064 Bhi-Chr5:38443637 1.56E-14 dispersed
Bhi05g01063 Bhi-Chr5:38443637 Bhi05g01064 Bhi-Chr5:38443637 0 tandem
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi07g01534 . 100 565 Xyloglucan Fucosyltransferase1 AT1G14080 57.5 1.8e-155 547.0
Bhi07g01534 . 80 566 Xyloglucan Fucosyltransferase1 AT1G14100 58.7 4.0e-165 578.9
Bhi07g01534 . 101 570 Xyloglucan Fucosyltransferase1 AT1G14110 53.9 1.2e-136 484.2
Bhi05g01063 . 34 546 Xyloglucan Fucosyltransferase1 AT1G49710 64.2 5.9e-193 671.4
Bhi01g01672 . 1 514 Xyloglucan Fucosyltransferase1 AT1G49710 62.5 3.0e-184 642.5
Bhi01g01671 . 1 435 Xyloglucan Fucosyltransferase1 AT1G49710 63.0 1.3e-152 537.3
Bhi05g01064 . 128 455 Xyloglucan Fucosyltransferase1 AT1G49710 75.1 7.6e-148 521.5
Bhi04g01632 . 7 405 Xyloglucan Fucosyltransferase1 AT1G71990 69.9 3.6e-169 592.0
Bhi07g01534 . 6 566 Xyloglucan Fucosyltransferase1 AT2G03210 56.7 2.4e-182 636.3
Bhi01g03067 . 20 501 Xyloglucan Fucosyltransferase1 AT2G03210 51.1 1.7e-140 497.3
Bhi07g01534 . 36 566 Xyloglucan Fucosyltransferase1 AT2G03220 64.5 3.5e-199 692.2
Bhi01g03067 . 15 501 Xyloglucan Fucosyltransferase1 AT2G03220 52.6 1.9e-152 537.0
Bhi07g01534 . 101 565 Xyloglucan Fucosyltransferase1 AT2G15350 54.9 6.7e-152 535.0
Bhi07g01534 . 101 565 Xyloglucan Fucosyltransferase1 AT2G15370 54.4 4.3e-146 515.8
Bhi07g01534 . 92 565 Xyloglucan Fucosyltransferase1 AT2G15390 54.9 5.0e-150 528.9
Bhi05g01063 . 34 546 Xyloglucan Fucosyltransferase1 AT3G19280 63.5 7.1e-191 664.5
Bhi01g01672 . 1 514 Xyloglucan Fucosyltransferase1 AT3G19280 64.3 4.0e-186 648.7
Bhi01g01671 . 1 436 Xyloglucan Fucosyltransferase1 AT3G19280 64.8 2.0e-153 540.0
Bhi05g01064 . 128 455 Xyloglucan Fucosyltransferase1 AT3G19280 76.8 1.9e-151 533.5
Bhi07g01534 . 6 566 Xyloglucan Fucosyltransferase1 AT2G03210 56.7 2.4e-182 636.3
Bhi01g03067 . 20 501 Xyloglucan Fucosyltransferase1 AT2G03210 51.1 1.7e-140 497.3
Bhi07g01534 . 36 566 Xyloglucan Fucosyltransferase1 AT2G03220 64.5 3.5e-199 692.2
Bhi01g03067 . 15 501 Xyloglucan Fucosyltransferase1 AT2G03220 52.6 1.9e-152 537.0
Bhi07g01534 . 6 566 Xyloglucan Fucosyltransferase1 AT2G03210 56.7 2.4e-182 636.3
Bhi01g03067 . 20 501 Xyloglucan Fucosyltransferase1 AT2G03210 51.1 1.7e-140 497.3
Bhi07g01534 . 92 565 Xyloglucan Fucosyltransferase1 AT2G15390 54.9 5.0e-150 528.9
Bhi07g01534 . 101 565 Xyloglucan Fucosyltransferase1 AT2G15370 54.4 4.3e-146 515.8
Bhi07g01534 . 100 565 Xyloglucan Fucosyltransferase1 AT1G14080 57.5 1.8e-155 547.0
Bhi07g01534 . 80 566 Xyloglucan Fucosyltransferase1 AT1G14100 58.7 4.0e-165 578.9
Bhi07g01534 . 101 570 Xyloglucan Fucosyltransferase1 AT1G14110 53.9 1.2e-136 484.2
Bhi07g01534 . 101 565 Xyloglucan Fucosyltransferase1 AT2G15350 54.9 6.7e-152 535.0
Bhi05g01063 . 34 546 Xyloglucan Fucosyltransferase1 AT3G19280 63.5 7.1e-191 664.5
Bhi01g01672 . 1 514 Xyloglucan Fucosyltransferase1 AT3G19280 64.3 4.0e-186 648.7
Bhi01g01671 . 1 436 Xyloglucan Fucosyltransferase1 AT3G19280 64.8 2.0e-153 540.0
Bhi05g01064 . 128 455 Xyloglucan Fucosyltransferase1 AT3G19280 76.8 1.9e-151 533.5
Bhi05g01063 . 34 546 Xyloglucan Fucosyltransferase1 AT1G49710 64.2 5.9e-193 671.4
Bhi01g01672 . 1 514 Xyloglucan Fucosyltransferase1 AT1G49710 62.5 3.0e-184 642.5
Bhi01g01671 . 1 435 Xyloglucan Fucosyltransferase1 AT1G49710 63.0 1.3e-152 537.3
Bhi05g01064 . 128 455 Xyloglucan Fucosyltransferase1 AT1G49710 75.1 7.6e-148 521.5
Bhi04g01632 . 7 405 Xyloglucan Fucosyltransferase1 AT1G71990 69.9 3.6e-169 592.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001699 7 4 2 3 2 2 2 2 2 2 2 2 2 2 2 2 2 3 2 2 2 2 2 2 2 2 2 2 4 1 70
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi05g01064 Bhi_Chr05 FPKM 17.731848 17.72086 19.382898 18.734287 14.009771 16.022831 15.173341 20.958935 23.493156 23.72304