Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01086 ATGGCCAAACCCTCACCTTTTGCCCTATTATTTATCTCTAATCTCTTTCTCTTCTCTTTCTTCTACACGGCGGCGATTGTCGCCGATGAATCGTCGCCTAAAACTGATCCTCAAAATCTCCACCTCCGCCTCCTCCACTTCCTCCACCTCCACCTCCACCAAACTTCGCGCCTTCGCCTCCACCTCCGAGTCCTCCTCCACCTCCGCGTCCTCCTCCTCCTCTCACCTCCGCTGTCCCTCCTCCCCCTCCTCTTCCAGCACCTCCTCCTCCTACTTGTGCCAACCATCCCCCAACCCCATCGCCACGCCGCCCACCACCGCCACCCACCTCCACCTCCACCTCCACCCCGACCCCCACCCCCACCCACCGCCCCCATCCCCACCCTCACCCCCGCCCCCACCCCACCTCCACCATCGCGAACCAAAATTGCATTAAAGGCCATAAATAATTTCAAACCAAGAATCGAGTTTGACCCAAATAATGTCACAGCGACGTGGAAAGGGTCAGACGTTTGCAAATACAGAGGATTCATATGCGACACAGTTCCTGATTACAAAAGCGAGGCGGTGGCTGGAGTGAGCTTCAACAACTTCGAATTCAGCGGTTCTAAGCTAACTCTAAATGGGTTCATCGACCAGTTACCAGACATCACTTTCTTCCATGCAAACTCCAACAACTTCATCGGCACCGTCCCTGAACTCATCTCCGATCTCAGATTCTTCTACGAGCTCGATCTTAGCAACAACAAATTCACTGGCGATTTTCCAAAGCAAGTCCTCGGCGCCACTAAACTCACGTTCCTAGACATTCGGTTCAATGGCTTCTGTGGTCCGGTCCCAGAGAAGCTGTTTGATATGGACATTATCACTGCTATCTTCCTCAACAACAACAAGTTTAACAACTACATTCCGGCTAACCTTGGCAACACCCCTGCTCGGTACCTCACCTTCGCCAGCAACGAATTCACTGGCCCGATCCCAAAAAGCATTGGAATCGGAAAAACAAAGAAGAACCTAATCGAAGTCCTCTTCTCCGACAACAAGCTTTCCGGCTGTTTACCAATGGAGATCGGTCTTTTAGAGAATGCCGTTCTCTTCGACGCAAGCAAAAACTCCCTCACCGGCCCAATCCCACATTCCTTTGCCTGTTTAGCCAAAATGGAGCTTCTCAATTTCGCCGACAACCACTTCTACGGCGCTGTTCCGGAGGCCGTCTGCAAGTTACCAAACCTCCAAAACTTCACTCTCCGCAACAACTTCTTCACCCAAGTCGGCCCCGTCTGCCGGAACTTGATCTCGAAGAAAGTTCTAGACGTTTCTGGAAACTGCATTTTGGGTCTGCCGGAGCAGAGATCGGAAGAGGAATGTACCCATTTCTTCACCAATGTTGAGTACTGTCAGGATGAGAAGTCAATGAAGTACATTCCTTGTAAAGGGAATTGGTATTTGAATGAAGATCCGGCCGCCGTACTCCGTCGGCCGGCGAGGAAAGTGACGGAGATGAGAACTTACGCGGCTCTTGTCCCGCATTAAATTTCTCATTCAATATGATGTTTATTTTTCTCTTATTTTCTGTGTGTTTTTATTATTATATCTTTGGTCAACAAAATTTATATATATTATTAAGAAGCAATGAAAAATAAAGATAGTAAGTTGAGGATGGTAATTTGTGAAATGTATGTAATAGTAACTTCCATTTGTATTGGGATATAATCAATTTATAATAGTAAAACTCTAGCATATTTGTCAAAATGAGCTTTA 1761 47.87 MAKPSPFALLFISNLFLFSFFYTAAIVADESSPKTDPQNLHLRLLHFLHLHLHQTSRLRLHLRVLLHLRVLLLLSPPLSLLPLLFQHLLLLLVPTIPQPHRHAAHHRHPPPPPPPPRPPPPPTAPIPTLTPAPTPPPPSRTKIALKAINNFKPRIEFDPNNVTATWKGSDVCKYRGFICDTVPDYKSEAVAGVSFNNFEFSGSKLTLNGFIDQLPDITFFHANSNNFIGTVPELISDLRFFYELDLSNNKFTGDFPKQVLGATKLTFLDIRFNGFCGPVPEKLFDMDIITAIFLNNNKFNNYIPANLGNTPARYLTFASNEFTGPIPKSIGIGKTKKNLIEVLFSDNKLSGCLPMEIGLLENAVLFDASKNSLTGPIPHSFACLAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRNLISKKVLDVSGNCILGLPEQRSEEECTHFFTNVEYCQDEKSMKYIPCKGNWYLNEDPAAVLRRPARKVTEMRTYAALVPH 510
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 39247574 39250464 - XM_039031207.1 Bhi05g01086 35296

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01086 510 SUPERFAMILY L domain-like 157 447 - -
Bhi05g01086 510 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 115 507 - -
Bhi05g01086 510 SUPERFAMILY Formin homology 2 domain (FH2 domain) 111 122 - -
Bhi05g01086 510 PANTHER BNAC05G26270D PROTEIN 115 507 - -
Bhi05g01086 510 Gene3D Ribonuclease Inhibitor 144 334 IPR032675 -
Bhi05g01086 510 Gene3D Ribonuclease Inhibitor 335 480 IPR032675 -
Bhi05g01086 510 MobiDBLite consensus disorder prediction 109 140 - -
Bhi05g01086 510 MobiDBLite consensus disorder prediction 100 140 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01086 - - - csv:101217962 649.818
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01688 Bhi-Chr1:35628484 Bhi05g01086 Bhi-Chr5:39247574 3.27E-150 dispersed
Bhi05g01086 Bhi-Chr5:39247574 Bhi09g03293 Bhi-Chr9:84075382 4.60E-102 dispersed
Bhi12g01876 Bhi-Chr12:60171470 Bhi05g01086 Bhi-Chr5:39247574 1.01E-63 dispersed
Bhi01g01687 Bhi-Chr1:35551159 Bhi05g01086 Bhi-Chr5:39247574 1.33E-107 wgd
Bhi04g00379 Bhi-Chr4:9311065 Bhi05g01086 Bhi-Chr5:39247574 8.32E-114 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g378 Blo02g00837 . . . . Bpe12g00047 . . Cmo19g00607 Cmo11g01379 . . . . . Cpe04g00293 Cpe15g00477 Bhi05g01086 . . . . . . Cla02g00623 Cam02g0657 Cec02g0660 Cco02g0683 Clacu02g0665 Cmu02g0660 Cre02g0978 . Cone8ag1115 Cone3ag0990 Cone10ag1008 . Csa07g00736 . Cme01g00072 . . . . . . . Bma08g00812 . . . . Cma19g00588 . Car19g00446 . . . . . . . . . . . . . . . . . . Chy01g00078 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000853 1 2 2 1 2 3 4 3 3 3 3 3 5 3 3 5 3 6 4 3 3 2 1 4 4 4 2 4 3 1 90
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi05g01086 Bhi_Chr05 FPKM 0.55885 0.563133 0.888842 0.834026 0.364255 0.371803 0.340177 0.713876 1.065642 1.420315