Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01088 CCCATTCCTTCAAAACCACGGCGATTTTCAGTTTCACCGCTCCACCTCCCTCTCTCTGTTGCTCCCTCCCACGTTCGAAACCCTAAATCGACTTCCCTCTTTGAAAATTTCTCACCCTTTTTCGCCTTGGATTGTTCAGCTATTGTTGTGTTTCTCTGGACGAGGAGTAATGCTTATGTGGGGTTCTTGACACTATCTCTAGTCATATAATGGATCCAAATTCTACTGATTCCCAAACATCACCTACTGTTAATTCCTCGGAAACTAAGCCGCCAGAAGTACGGCCTCAGGCTCCTGCTACCACTGGAATGGATAATGTAGCCCGTGATGCAACATCTAAGCTATCTCCAAGTGGCATAACTTCATGGGCGAAAAACTTGAAAATTTCTCAACCACAGTCAGCTTCACAAGTTGGAGCGACTGATAATGCTGCTGGGAAGTCAGCTTTTGCACGTTTTACTAGTGGCTTAGGTTTGAACTTGTCTCCAAAATCATCTGCTCCACCTAATGATTCCCCAGATGGAACTTCTAAACCTGCCCAGCCCAGTTTTGTGGGATCAATTACAAGAGGGTTGGTTGACTCTTCAAAGAGTGCTGTAAAGGCTGTACAAGTTAAAGCTCGTCATGTTGTCTCCCAAAATAAGCGAAGATACCAGGAAGGTGGATTTGATTTGGATATGACTTATATTACTGAAAATATCATTGCTATGGGTTTTCCTGCTGGTGACATGAGCTCAGGGTTTTTCGGTTATGTTGAGGGTTTCTACAGGAACCATATGGAAGAAGTCATCAAGTTCTTTGAAACACATCACAAGGGAAAATACAAAGTATATAATCTTTGTTCGGAGAGGCTATATGATGCTTCATTATTTGAAGGAAAGGTGGCTTGTTTTCCTTTTGATGACCATAACTGTCCGCCAGTTCAACTCATAATATCATTTTGCCAAAGTGCTTATTCATGGCTGAAGGATGATATTGAAAATGTAGTAGTTGTGCATTGCAAGGCAGGAATGGCCAGGACAGGCTTGATGATTTCCAGTCTTCTTCTATTTCTTAAGTTCTTTCCAACCGCTGAAGAATCCATCGAATACTACAACCAGAGAAGGTGTTTTGATGGCAAAGGCCTGATCTTACCAAGTCAGATTAGGTATGTCAAATATTTTGAGCGTATTCTAACATACTTCAATGGAGAAAATCCTCCCAGTCGCAGGTGTGTGCTTAGAGGGTTTCGTCTCCACAGATGCCCATATTGGATCAGGCCTTCCATTACTGTATCTGACCATAATGGTGTTCTGTTCTCCACTAAAATGCATCCAAGAACCAAAAGTCTCTCGCCAGAAGATTTTTGGTTTACTGCACCAAAGAAGGGGATAATGGTCTTCGCCTTGCCTGGGGAGCCTGGTCTAGCTGAGTTGTGTGGGGACTTTAAGGTTCATTTCCATGACCGCCAAGGAGATTTCTATTGTTGGCTAAACACAACCATGACTGAAAATCGGAAAATGCTCTACACGAATGATCTTGATGGGTTCGACAAGAGGAAACTACCGTCCCCTGGATTTCAGGTGGAGGTTGTTCTAGTAGATACGTCACCCAACATGGACAATACTACCAAAAAGTCGGATGAAAGCTCAGGCTCAAAACCTTCTGCAGCGGATGGAAATGAAGTTTCTGGGAACCAAAACAGAAAATCAGGAACTAATGATAAAGATGATGTATTTTCTGATAGTGAATCAGAAGGTGGTTCTTCAAAGAGCAAGAAGGAGGCAACTTCTGGTTCAGGGGCTGAAGGATCAGCTGTCAAGACAACATCTAAATCTCAAACGAGTATGACTTCATCGGATGATGTTGCGAGTTTATCACATGCAACAAAGCAAGTTTCCCTGGGAGATGGTGGTGCTAAACAGACTGCTCCTGCCAGCGATAAAAAAGGTGACGGAGTCGGAAGATCTGATTCTCTCCCAGAAGTTCCAAACTCAGAAAGTGAATTCAAGGCAATGGCTGCTGATGCTTCTGTTTTCACATTTGGCGACGACGAAGACTATGAGAGTGACTAAATGAGAAGGCACAATGTTATTCGCCCCAAGCCACGGCCCATCGTCTGTACATAAAAACCGTGCTGCAGGTGAACCTTAAGATTCATTCATTTGGGTTGTAAATTCAAAGTCTGTCTCAGTATCTGGTTTATTGTTGAATTGAGATAGCATGTCAAAAAAAAAAAAAAAAGAAGTTATTTAAGTTCGTTTTGAAGACGATACTGTTCTATAAAGTTCAATAAAGCTCAAGTGCAGAAGACTGTTTGACATGGTTTTTCTGTCATTTAGGCTTGTAATTTGCTGAATCAGCTTGTCTTATCTTGTAGAGTGCCTTTGGCCATGTGGACAAATGAAATGGATTTTAATTTTGGAAAAAA 2410 42.12 MDPNSTDSQTSPTVNSSETKPPEVRPQAPATTGMDNVARDATSKLSPSGITSWAKNLKISQPQSASQVGATDNAAGKSAFARFTSGLGLNLSPKSSAPPNDSPDGTSKPAQPSFVGSITRGLVDSSKSAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDASLFEGKVACFPFDDHNCPPVQLIISFCQSAYSWLKDDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESIEYYNQRRCFDGKGLILPSQIRYVKYFERILTYFNGENPPSRRCVLRGFRLHRCPYWIRPSITVSDHNGVLFSTKMHPRTKSLSPEDFWFTAPKKGIMVFALPGEPGLAELCGDFKVHFHDRQGDFYCWLNTTMTENRKMLYTNDLDGFDKRKLPSPGFQVEVVLVDTSPNMDNTTKKSDESSGSKPSAADGNEVSGNQNRKSGTNDKDDVFSDSESEGGSSKSKKEATSGSGAEGSAVKTTSKSQTSMTSSDDVASLSHATKQVSLGDGGAKQTAPASDKKGDGVGRSDSLPEVPNSESEFKAMAADASVFTFGDDEDYESD 614
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 39354643 39361524 + XM_039032190.1 Bhi05g01088 35298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01088 614 Gene3D - 330 460 - -
Bhi05g01088 614 CDD PTP_PTEN 156 321 IPR045101 GO:0016791
Bhi05g01088 614 ProSiteProfiles Phosphatase tensin-type domain profile. 146 325 IPR029023 -
Bhi05g01088 614 MobiDBLite consensus disorder prediction 457 594 - -
Bhi05g01088 614 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2A 14 614 - -
Bhi05g01088 614 MobiDBLite consensus disorder prediction 90 116 - -
Bhi05g01088 614 MobiDBLite consensus disorder prediction 515 555 - -
Bhi05g01088 614 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 260 299 IPR000387 GO:0016311|GO:0016791
Bhi05g01088 614 SMART PTEN_C2_2 330 458 IPR014020 -
Bhi05g01088 614 ProSitePatterns Tyrosine specific protein phosphatases active site. 262 272 IPR016130 GO:0016311|GO:0016791
Bhi05g01088 614 MobiDBLite consensus disorder prediction 458 493 - -
Bhi05g01088 614 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 401 456 IPR035892 -
Bhi05g01088 614 MobiDBLite consensus disorder prediction 1 22 - -
Bhi05g01088 614 MobiDBLite consensus disorder prediction 494 514 - -
Bhi05g01088 614 Gene3D Protein tyrosine phosphatase superfamily 131 328 IPR029021 -
Bhi05g01088 614 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 14 614 - -
Bhi05g01088 614 MobiDBLite consensus disorder prediction 1 49 - -
Bhi05g01088 614 ProSiteProfiles C2 tensin-type domain profile. 332 459 IPR014020 -
Bhi05g01088 614 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 159 327 IPR029021 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00963 Bhi-Chr3:18342305 Bhi05g01088 Bhi-Chr5:39354643 0 dispersed
Bhi05g01088 Bhi-Chr5:39354643 Bhi11g02948 Bhi-Chr11:79506552 3.27E-45 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01088 K01110 - csv:101222304 1152.12