Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01092 TCACTCTGCTAAAAACTCATCTCGTATCTCTCTCTTTTTCTCTCCTCCATCCCCAACACTAAAAAGCACAAGAACAAGAACCAAAAAGTAAACAAAGAAAAAGGGGGAAAATGGGGGTTTTCCTCTCCTTCCTATAATGACTCTACACAACTCAATCCTCTTCTTCCAAGAAGAAGAAGAAGAAGATGGCTTTGCACTCAAATAAACACAGAACCCAACGCATCCATAGCTCTCTCTTCTTCCTCGACTTCCTCCACTGCACTGAACAACAACACCATCAAACAGAGCATCCCATTTTCCTTAACAATGGCGGCACCAACGACTTCCCTCTTTCCCAAGAAACAACCCATTTCCTTGTTAGCGAAGACGAGGAGCTCAGTCATTTGTTGTCCAAAGAAAACGACCAGAATCTCCAAACCGGCGCCGTTTTGAAAACCTTGATTCAAACAGATAATGCTCTGTCTCTCGCTAGAACGGAGGCCATCGACTGGTTGCTTAAAGTTAATGCCTTTTATGGCTTCTCCTCTCTCACAGCTCTCTTAGCTATTAACTACCTTGATAGAATCCTCTCTGGTCCTCATTTTCAAAGAGATAAGCCATGGATGCTTCAACTTCTTGCTGTAACTTGCATCTCTTTAGCTGCTAAATTCGAAGAAATTCGTGTCCCTCTTCTTCTAGATCTCCAGGTGGAGGATTCAAAGTACATTTTTGAAGCGAAAACGATACAGAGAATGGAGCTTTTGGTGCTCACTGCTCTGCAATGGAAGATGCATCCAGTAACCCCTGTTTCGTTTCTGGGTATTATAATGAAAGGGCTTGGAATGAAGAATCAGTACATTCAAAGAGAGTTTCTTAGACGCTGTGAGCGTATTCTTCTCTCTCTCGTCTCTGATTCGAGATCGGTAGGGATTCTTCCCTCTGTAATGGCGGTATCAACAATGGTAAGCGTTGTTGAAGAGATGGGAAACTGTAACCCATTGGAGGAGTTTCAAGATCATCTTCTTAGTGCCCTCAAAATAAACAAGGGGAGAGTGAAGGAGTGTTGTAAAGTGATAATGGAGGCAAAAGCAAAAGGATCAATGAAGAGGAAGCATGTGGAGGTGGAAGCAGAAGCAGAAGCAGAAGCAGAATCAGAAGCAGAAGTAGAATCATCAGAAACAGAAACAGAAGCAGAAACAGGGAGCCCAAATGGAGTAATAGAGGCTGATTTCAGCTGTGAAAGCTCCAACGATTCGTGGGAAATGGGGACAATTGTGTCAGCATATACACATTTTTCTTCTTCTTCTTCCAAAAGAATCAGACCCACTCGATGAAAGTATTGAATTAAAACCAAATTTGCAGAGATTCATTATCATTAGCCTTCCCCTGTTTTGAAATGGCATTTTGGCAAAGACAAAAACAGACACACAAAAAGGAGGGAAATATTGAGATATGAAATGATGATGATGATGATGAGAGAGATTGTTCTTGTTCTTCTCTTTCTATAGCTAACTAATTATGTTGTATATGATGAAATTCATGAGTATTTGCTTCTATTATATTCCTCTTTATTTTGTTA 1558 40.89 MALHSNKHRTQRIHSSLFFLDFLHCTEQQHHQTEHPIFLNNGGTNDFPLSQETTHFLVSEDEELSHLLSKENDQNLQTGAVLKTLIQTDNALSLARTEAIDWLLKVNAFYGFSSLTALLAINYLDRILSGPHFQRDKPWMLQLLAVTCISLAAKFEEIRVPLLLDLQVEDSKYIFEAKTIQRMELLVLTALQWKMHPVTPVSFLGIIMKGLGMKNQYIQREFLRRCERILLSLVSDSRSVGILPSVMAVSTMVSVVEEMGNCNPLEEFQDHLLSALKINKGRVKECCKVIMEAKAKGSMKRKHVEVEAEAEAEAESEAEVESSETETEAETGSPNGVIEADFSCESSNDSWEMGTIVSAYTHFSSSSSKRIRPTR 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 39421565 39424218 + XM_039031616.1 Bhi05g01092 35302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01092 375 MobiDBLite consensus disorder prediction 301 344 - -
Bhi05g01092 375 Gene3D - 77 196 - -
Bhi05g01092 375 CDD CYCLIN 96 188 IPR013763 -
Bhi05g01092 375 ProSitePatterns Cyclins signature. 96 127 IPR006671 -
Bhi05g01092 375 PANTHER CYCLINS 31 350 IPR039361 -
Bhi05g01092 375 PANTHER CYCLIN-D3-1 31 350 - -
Bhi05g01092 375 Pfam Cyclin, C-terminal domain 198 302 IPR004367 -
Bhi05g01092 375 MobiDBLite consensus disorder prediction 310 326 - -
Bhi05g01092 375 SMART cyclin_7 101 189 IPR013763 -
Bhi05g01092 375 SUPERFAMILY Cyclin-like 58 196 IPR036915 -
Bhi05g01092 375 Gene3D - 66 288 - -
Bhi05g01092 375 Pfam Cyclin, N-terminal domain 74 195 IPR006671 -
Bhi05g01092 375 SMART Cyclin_C_2 198 316 IPR004367 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00966 Bhi-Chr3:18371412 Bhi05g01092 Bhi-Chr5:39421565 3.25E-75 dispersed
Bhi05g01092 Bhi-Chr5:39421565 Bhi09g03276 Bhi-Chr9:83901001 1.06E-76 dispersed
Bhi03g02019 Bhi-Chr3:43247357 Bhi05g01092 Bhi-Chr5:39421565 5.75E-26 transposed
Bhi01g01689 Bhi-Chr1:35769856 Bhi05g01092 Bhi-Chr5:39421565 3.74E-93 wgd
Bhi04g00381 Bhi-Chr4:9350821 Bhi05g01092 Bhi-Chr5:39421565 9.27E-86 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01092 K14505 - csv:101222066 577.785