Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01107 TGTCAATCAATTCCAATTTCCCTACAAATAATCCCTCAAAGTAAGCCATTGACGACCACAATCAATATGACTTCTAAACAATCTCCTTCCCATGTCTTCCTAGTGTGTTATCCCGGCCAAGGACATATCAATCCCACTCTCAGACTAGCCAAGAAACTCGCCGCCGACGGCCTTCTCGTCACCATTTCCACGGCGGCGTTTTACCGTCAAACACTGCAGAAAGCCGGAAGTATCCGCGGCGGCGGCGACCAACCTACTTCCGTCGGTAATGGCTTCATCAGATTCGAATTTTTCGAAGATGGCCTCGGAGAGATTAATCTCAAGGACATAAACTTGGACCGCGTCGTCGCCCAGCTCGAGCTCTCCGGCCGGCCATCGCTTACCGATCTGATTAAGAACCAAACCGCCAAAAACCGCCCGGTTTCTTGCCTGATTTTGAACCCCTTTTTGCCATGGACTTACGAAGTTGCAGAGGAGCTTCAAATCCCCTGTGCCATTCTCTGGGTTCAATCTTGCGCTGTGTTCTCAATTTACTATCATTATTTCCACAATTTCTCCTCGTTTCCTTCTGAAATCGAACCCAAAGTCGATGTTCAGCTCCCGATTTTGCCGCTTTTGAAGAACGATGAAATCCCAAGCTTCTTGCATCCCAATAACATCTATGGTATTTTGGGAAAAACTCTGTCAACCCAAATTGGTAAATTATCAATACCCTTTTGTATTTTGATGGATACTTTCGAAGAACTCGAGAAGGAAATCATCAATTACATGTCGAAAACCATTCCAATAAAACCCATTGGCCCATTGTTCTTAAACTCCCAAAAGTTAGAAACAGAGATCTCTGTCGACTGCCTAAAACCAGAGGATTGTATGGAGTGGCTAAACTCGAAGCCCCCACAATCCGTCGTCTACGTTTCATTTGGAAGCATCGTTTACTTGAAACAAGAGCAAATCGATGAGATTGCTTATGGGCTTTGCAATTCAGGGTTCTCATTTTTATGGGTCCTGAAACCGCCGTCTGAATTTTTCGATCTAAAACGCCATATTTTGCCAGCAGAGGTTCTGGAAAAAACAGGGGAGAGGGGGAAAATAGTGCAATGGAGCTCACAAGAGCGGGTTTTATCACATGAATCTGTTGGGTGCTTTTTGACGCACTGTGGGTGGAATTCATCGGTGGAAGCCGTCGCCAACGGTGTTCCGGTGGTGGCGTTCCCGCATTGGGGGGATCAAGTGACGAACGCCAAGTTTCTGGTGGAGGATCATGGAGTTGGAGTGAGGCTGTCGCGTGGAGCAGAGGCAAGTGAGTTGATTACGAGGGATGAAATTGAGAGATGTTTGACGGAGGTGATGATCAGCGGCGGTGGAGAGAGGAAATTGAGGCAAAATGCTTTGAAATGGAAGAAGGCGGCAGCGGCGGCTGTGGCGGACGGCGGCTCCTCTGCCCGTAACTTCGAAGAATTTGTTGATGAGATTAGACAGAGATGTTCGAGAGGTGAGCTTTAGTAAAATGTCACACTAAACTCTTGTTTGTGTGATGAGATCATAAATCACATTGTACCAAATTGTCATAAAGTTGGTGATCATAAATCACGAGATTTATTTATGTACTTTTAAAAGTGAGTTAATATCCTTTTCGGTTGGTGTGAAA 1648 45.75 MTSKQSPSHVFLVCYPGQGHINPTLRLAKKLAADGLLVTISTAAFYRQTLQKAGSIRGGGDQPTSVGNGFIRFEFFEDGLGEINLKDINLDRVVAQLELSGRPSLTDLIKNQTAKNRPVSCLILNPFLPWTYEVAEELQIPCAILWVQSCAVFSIYYHYFHNFSSFPSEIEPKVDVQLPILPLLKNDEIPSFLHPNNIYGILGKTLSTQIGKLSIPFCILMDTFEELEKEIINYMSKTIPIKPIGPLFLNSQKLETEISVDCLKPEDCMEWLNSKPPQSVVYVSFGSIVYLKQEQIDEIAYGLCNSGFSFLWVLKPPSEFFDLKRHILPAEVLEKTGERGKIVQWSSQERVLSHESVGCFLTHCGWNSSVEAVANGVPVVAFPHWGDQVTNAKFLVEDHGVGVRLSRGAEASELITRDEIERCLTEVMISGGGERKLRQNALKWKKAAAAAVADGGSSARNFEEFVDEIRQRCSRGEL 478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 40023926 40025573 + XM_039031073.1 Bhi05g01107 35317

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01107 478 Gene3D Glycogen Phosphorylase B; 13 462 - -
Bhi05g01107 478 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 7 473 - -
Bhi05g01107 478 PANTHER UDP-GLYCOSYLTRANSFERASE 84A1 7 473 - -
Bhi05g01107 478 CDD GT1_Gtf-like 9 428 IPR002213 GO:0008194
Bhi05g01107 478 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 469 - -
Bhi05g01107 478 ProSitePatterns UDP-glycosyltransferases signature. 345 388 IPR035595 -
Bhi05g01107 478 Gene3D Glycogen Phosphorylase B; 257 450 - -
Bhi05g01107 478 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 265 409 IPR002213 GO:0008194
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01107 - - K23279 csv:101215819 768.074
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01107 Bhi-Chr5:40023926 Bhi05g01109 Bhi-Chr5:40108604 0 dispersed
Bhi05g01106 Bhi-Chr5:39959536 Bhi05g01107 Bhi-Chr5:40023926 0 tandem
Bhi05g01107 Bhi-Chr5:40023926 Bhi05g01108 Bhi-Chr5:40053228 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g623 . . . Bda08g00763 . . . . . . . . . . . . . Bhi05g01107 . . . . . . . . . . . . . . . . . . Csa07g00720 . Cme01g00088 . . . . . . . . . . . Cma11g01722 . . . . . . . . . . . . . . . . . . . . . Chy01g00095 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000463 3 5 1 1 1 4 5 5 5 4 5 5 4 3 3 5 5 4 4 5 4 3 4 5 5 5 3 5 4 3 118