Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01141 GAAACAGATGATGACAAAAGGGAACAATGAGGATCAACAATGAAAAAATGCAGTGATCACACGAGGCCCATCGCCATATCTTCTGAATCTGAAAGAACAATCCAGAGTCCCTTCAATCCTTCTCTTCCAATTTCTATTTCATTACCCTAAACCCTTCTCTAAACCTACTTTCTTTTCAAATTTTTCAACACTGACACAGTCCCACACAGACCCACAAAGAAAGAGAAAGAGAGAGTGACAGATTTCCTAATAAATAGTGGCCGACCCTCTTTAGGGTTCATCGATTTTTGTCTTCATTTCCACGTTCTCCCAGATTCATCGATTCTGTTTTCACTCTGTTTTGAAGGCCTCGGAACACTCTACAAACTCGTTTACATTACTGGGTCAAGCTAGTTGAGGCTTGAGATTCAGTGATTGTGGGAAATGGGGAGGATCCGGTGCTTCTTGGATATCAGTATTGGAGGTGATCTTGAGGGTAGAATTGTGGTGGAGCTTTACGACGATATAGTGCCTAAAACAGCTGAGAATTTCAGGGCTCTTTGCACTGGCGAGAAGGGCATTGGTCCTCATACCGGCGTTCCCCTTCATTTCAAGGGGTCATGTTTCCACCTTGTTATAAAAGGATTCATGGTACAAGGTGGAGATATTTCTGCTGGAGATGGTACTGGTGGAGAGTCTATATATGGCATGAAATTCGATGACGAAAATTTTGAGGTGAAACATGAAAGAAAAGGAATGTTGTCTATGGCTAATTCTGGTCCCAACACAAATGGGTCCCAATTTTTTATCACAACTACTCGAACTCCTCATTTAGATGGGAAACATGTAGTGTTTGGGAAGGTTCTGAAAGGAATGGGTGTTGTTCGTTCAATTGAGCATGCTACAACTGGTGACGATAACTGCCCTACTGCCGATGTTATTATTGTGGATTGTGGAGAAATTCCTGAGGGAGCAGATGATGGAATTTCAAACTTTTTCAATGATGGGGATACGTTTCCTGATTGGCCAGCTGACCTGGAACAAAGCTCTGATGAACTTGAATGGTGGGTGAATGCAGTTGATTCTGTGAAGGTTTTTGGCAACGAGCATTACAAGAAGCAAGACTACAAGATGGCTCTCAGAAAGTATAGGAAGGCTTTACGCTACCTTGATATCTGCTGGGAAAAAGAAGGAATCGATGAAGAGAAGAGTTCATATCTTAGAAAAACTAAATCACAGATATTCACAAACAGTTCGGCTTGTAAATTGAAGTTAGGGGATCTAAAAGGAGCATTGCTAGACACTGATTTTGCAATGCGTGACGGAGACAACAATGTTAAGGCTTTGTTTCGCCAAGGTCAGGCATACATGGCTCTTAATGACATTGATTCTGCTGTCGAAAGTTTCAAAAAGGCATCAGATTTGGAGCCAAATGATGCTGCCATAAAGAAAGAGCTTGCTGCCGCGAGGAAAAAGATTGCTGACAGACGTAATCAAGAAAGAAAGGCATATAGCAAGATGTTCCAGTAGCCCCTGATTAGTTTATGGAGTAGAGAGCTAGATCCATACCCGACGAGTTTCACCCATGCGAAATCAAATCGATCGATATTTGATTGACCGATGGTTGGTACTGCATTGGTGCTTTGAACTGGAAGATGTTAAAAGTAATGTACTAAGGCTGGATGAAACTCTCCATTCAAACAATTTTGTCAACAAGAAAAACCAATGAGATTTAAAAAAATACATTATTTGTTCTCTTATTTTCCTCTTTTAAAGTTTCTATGGCATTCTGGACAGGTTTTTGGCTTTAATGGTTAGGATTTTATAGGTTTTGC 1814 40.85 MGRIRCFLDISIGGDLEGRIVVELYDDIVPKTAENFRALCTGEKGIGPHTGVPLHFKGSCFHLVIKGFMVQGGDISAGDGTGGESIYGMKFDDENFEVKHERKGMLSMANSGPNTNGSQFFITTTRTPHLDGKHVVFGKVLKGMGVVRSIEHATTGDDNCPTADVIIVDCGEIPEGADDGISNFFNDGDTFPDWPADLEQSSDELEWWVNAVDSVKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEEKSSYLRKTKSQIFTNSSACKLKLGDLKGALLDTDFAMRDGDNNVKALFRQGQAYMALNDIDSAVESFKKASDLEPNDAAIKKELAAARKKIADRRNQERKAYSKMFQ 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 40859054 40864871 - XM_039031993.1 Bhi05g01141 35351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01141 361 Gene3D - 2 179 IPR029000 -
Bhi05g01141 361 ProSiteProfiles TPR repeat region circular profile. 298 331 - -
Bhi05g01141 361 SUPERFAMILY TPR-like 209 354 IPR011990 GO:0005515
Bhi05g01141 361 Pfam Tetratricopeptide repeat 299 331 IPR019734 GO:0005515
Bhi05g01141 361 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 8 171 IPR002130 GO:0000413|GO:0003755
Bhi05g01141 361 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP40 1 361 - -
Bhi05g01141 361 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 24 39 IPR002130 GO:0000413|GO:0003755
Bhi05g01141 361 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 IPR002130 GO:0000413|GO:0003755
Bhi05g01141 361 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 104 119 IPR002130 GO:0000413|GO:0003755
Bhi05g01141 361 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 131 IPR002130 GO:0000413|GO:0003755
Bhi05g01141 361 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 132 147 IPR002130 GO:0000413|GO:0003755
Bhi05g01141 361 SUPERFAMILY Cyclophilin-like 5 175 IPR029000 -
Bhi05g01141 361 CDD cyclophilin_ABH_like 5 171 - -
Bhi05g01141 361 Gene3D Tetratricopeptide repeat domain 206 361 IPR011990 GO:0005515
Bhi05g01141 361 ProSiteProfiles TPR repeat profile. 298 331 IPR019734 GO:0005515
Bhi05g01141 361 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 7 172 IPR002130 GO:0000413|GO:0003755
Bhi05g01141 361 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 361 - -
Bhi05g01141 361 SMART tpr_5 298 331 IPR019734 GO:0005515
Bhi05g01141 361 SMART tpr_5 212 245 IPR019734 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi05g01141 Bhi10g02077 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01141 Bhi-Chr5:40859054 Bhi10g02077 Bhi-Chr10:52129121 0 dispersed
Bhi08g01990 Bhi-Chr8:57414494 Bhi05g01141 Bhi-Chr5:40859054 1.00E-06 dispersed
Bhi05g01140 Bhi-Chr5:40859054 Bhi05g01141 Bhi-Chr5:40859054 0 tandem
Bhi05g01141 Bhi-Chr5:40859054 Bhi05g01142 Bhi-Chr5:40859054 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01141 K05864 - csv:101208688 696.812