Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01240 ATAGACAATGGCAAGGCATGGATAACAAAAAGCTCTTTCCTTTCTCCATATATTTTTGGGATTTCATTTCATCATTATTTAGCGGAACCCCGTTCGAGTTTGGGAAGCGCAGGTCTATGACTGTGAGACTCCGTTTTATCTCTGTTTTGGTACTCCGGACATGCTCACGTGGCAGTCATGTCAGTCTGCCCCACCTCCCACGGCCTATGGTTATGGCTTCATTCCACATCTCTCTGCCCCATCCCCTTCTCTCTCTCTCTCTCTAAACCAATAATTCCGGCTACTTCTTGTCACTCTCCGGCCACCACCACCCCCCAACTTTTCCCCTTTATATATACCCCACCCCCTTTTCTCTCTCTTCTCTTCTCTATAATCAATCTTTGAGACGCCTCGTGTGTTTGGTGTGAGATTTCAGAGGCTTCCTCTTCCTCTTTCTTGTTTTTGTTCTTCCTTTTTCATGGTTTTGAGGGTTATAGGGTGTTTCAGAAGGAGAAAAGAGACGTTTTCTTGGTTCTTGGTGGTGGGATTTCCTTTGAATTTGAGGATTTTTTTTTTTTGAGGTGGGGTTTTGGTTTTTTTTGTTTGGAGAAAGATGAACAGAGCATTGCCGGAGATGTTGCACTGTTTGAACACTGCCGGGAACTGTTCTGATACTCTCAGTGTTCTTGAGAGGCAGAGAGCTCGTTTGAAATGGCAGCAAGATCAGCTTTTGCAGCAGCAGCAGCAGCCATTAAATCAGAGCTGTTTCAATAGGGTGGATTACGGCGGCGGATTTCCGTCGCCGGTGTCTGTTCCGGCGGATTACCTAACGGGGTTTCCGGGGTTCATGAGTGGCAGCGGCGGCAGTGGAGGTGCTGGGTTGTCACTTGTTGAGATGGTAATGGGGGCAGTGAAGCCTGACCCTGGGTTGGAAGATGGGTGGTCTGGAATGAGCAAGTTTGATCCTTCTTTGTTGCTGAATGGCACTGCTTATGAAATAAATTCTTCTCTCTCTAGAACATCCAGCTGCCCGCCGGCTGTGGCTCCTACGGTGGTGGAGAAGATGGGGTCGGTGGCTGGAAGAGAGACCTTCAAGAAAAGGAAAGCTGAGAAAGTTCACAACACAACCAACAACAATAATAGCAGCAAGGTGACTGTAGAAGAAGATAACAACAGTAGTAAGGAGAAGAGGATCAAAGCAAGTTCAGAAGAAGGAGAATTATCTAAAACCACAGATCAAAACAGCACCAAAAACAACTCGACCACAACCACAACAAACAACAACAGAGAAACTTCAGCTGATACCTCAAAAGAAAACTCCAAAGCTTCAGAGGTTCAAAAGCCTGATTACATTCATGTCAGAGCTCGCCGTGGCCAAGCTACTGATAGCCATAGCTTAGCTGAAAGAGCTAGAAGGGAAAAAATCAGTGAGAGAATGAAGTACTTGCAAGATTTAGTACCAGGATGCAATAAAATCACTGGAAAAGCTGGAATGCTGGATGAGATCATAAACTATGTTCAATCTCTTCAAAGACAAGTTGAGTTCTTGTCCATGAAGTTAGCTGCTGTAAATCCAAGGTTAGACTTCAATGTCGATGATCTCTTCAACAAAGAGGTTTTCCCACCATCTTGCACCACCGCAAATTTCCCGGCGATCGGCGGAATGTCATCGGAGATGACAGATCCTTCTTCCTTCTTACAATTCAATCCAAATAATCAACCAATGGTCTCATGTTGTGGATTAGAAATGGGAATCAATACCTCCGATGTCGCTCTTCGAAGAACAATCAGCGCCCCTGTTTCTTTCCCGGAAAATTTCCTCGATTCATCTTGCCTCACCCAATTTCAACCCTCTTCAGGGTGGGATGTGGATTTGCAGAATCTATACAATGTGGGTTTTGATCAAGGAAGATCATCAAACGCCTTTTCATCTCAACCATATACAGGTTCAATTGAAGGAGGCAATATAAAGATGGAAATGTGAAGTAGGTAGCTAGAGCCTAGATCCATCCATCTTCACCCTTTCATGAGATTCAATCAAAAATATTAGTCTCTTATTTGCTTCAATTCCATATCTATATATTCTTTTTTCTTTTCCCAAAGTATATAACTAGCTCATATAAATATATATAATATATATATTTTGTATGTATACATCCGGCTCAATTTGAATAAGAGTAGCATAAATTAACCACAA 2176 43.24 MNRALPEMLHCLNTAGNCSDTLSVLERQRARLKWQQDQLLQQQQQPLNQSCFNRVDYGGGFPSPVSVPADYLTGFPGFMSGSGGSGGAGLSLVEMVMGAVKPDPGLEDGWSGMSKFDPSLLLNGTAYEINSSLSRTSSCPPAVAPTVVEKMGSVAGRETFKKRKAEKVHNTTNNNNSSKVTVEEDNNSSKEKRIKASSEEGELSKTTDQNSTKNNSTTTTTNNNRETSADTSKENSKASEVQKPDYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDDLFNKEVFPPSCTTANFPAIGGMSSEMTDPSSFLQFNPNNQPMVSCCGLEMGINTSDVALRRTISAPVSFPENFLDSSCLTQFQPSSGWDVDLQNLYNVGFDQGRSSNAFSSQPYTGSIEGGNIKMEM 456
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 44812916 44816630 + XM_039032899.1 Bhi05g01240 35450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01240 456 Gene3D - 252 326 IPR036638 GO:0046983
Bhi05g01240 456 MobiDBLite consensus disorder prediction 184 202 - -
Bhi05g01240 456 CDD bHLH_AtBPE_like 245 330 - -
Bhi05g01240 456 PANTHER TRANSCRIPTION FACTOR BHLH63-LIKE 19 436 - -
Bhi05g01240 456 Coils Coil 22 45 - -
Bhi05g01240 456 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 253 324 IPR036638 GO:0046983
Bhi05g01240 456 MobiDBLite consensus disorder prediction 158 245 - -
Bhi05g01240 456 MobiDBLite consensus disorder prediction 203 229 - -
Bhi05g01240 456 SMART finulus 261 311 IPR011598 GO:0046983
Bhi05g01240 456 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 19 436 IPR024097 GO:0006355
Bhi05g01240 456 MobiDBLite consensus disorder prediction 230 245 - -
Bhi05g01240 456 Pfam Helix-loop-helix DNA-binding domain 259 306 IPR011598 GO:0046983
Bhi05g01240 456 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 255 305 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi05g01240 Bhi10g02007 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01240 Bhi-Chr5:44812916 Bhi09g01292 Bhi-Chr9:31785094 1.83E-52 dispersed
Bhi01g01175 Bhi-Chr1:23058893 Bhi05g01240 Bhi-Chr5:44812916 2.15E-48 transposed
Bhi02g00374 Bhi-Chr2:7074419 Bhi05g01240 Bhi-Chr5:44812916 1.35E-43 transposed
Bhi04g01237 Bhi-Chr4:30806377 Bhi05g01240 Bhi-Chr5:44812916 6.13E-44 transposed
Bhi11g02669 Bhi-Chr11:71875136 Bhi05g01240 Bhi-Chr5:44812916 2.50E-45 transposed
Bhi10g02007 Bhi-Chr10:50176855 Bhi05g01240 Bhi-Chr5:44812916 1.61E-56 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1192 PF00010 HLH 1.30E-06 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01240 - - cmo:103490373 744.191