Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01246 GATATACACATGGGTGAAAAAACTAAAAAATGATCGAAGAATGAGAGCTTTTAGAGAATTTTAAATTTCTATAAATTTCTATAGTTATATTTTATTATTTTGATTATTTAATTATTATAGTGTAATTTCTCCCATTACTAGTTGGTGTGGTGTGTAGTTTTGCTCCTCAAATTTTACAAGGAGATATTAGTGACATTGGGCCAATTTTCCATCGGCACTACTCTCTTTCCCTCCTCTTCTCTTCAATCTTTTTCCCCAATCTCGATTTGCCTCTGCCTCTGGTTTGTCCGACCGATTCCTCGCCGGAAATCTTCATCCGATGGCTTCCAAAAGCAGAATCCTCGTCGTCGGAAGCACCGGCTACATCGGTAAGTTCATCGTCGAGGCCAGCGCCAAGGCCGGTCATCCGACCTTCGCTCTCGTCCGAGATTCCGCTCTCTCTGATCCAGCCAAATCTCAAATCATCCAGAGCTTCAAGAACATCGGAGTCATTATCGTCTCTGGCGATCTGTTCGATCATGAGAGTTTGGTGAAGGCGATAAAGGAAGTGGATGTGGTGATTTCGACGGTCGGTCTTAATCAATTAAGCGATCAAGATAAGCTCATTTCCGCCATTAAAGAAGCTGGCAATGTTAAGAGATTTTTCTCTTCGGAGTTCGGGTTCGATGTAGAGAATGTGCATGGAATTGGACCAGTCAAATCAATTTTCGAGGCAAAGGTTAAAATTCGTCGAGCCGTGGAGGCTGAAGGAATCCCTTACACTTATGTCTTGTCTTATTACTTCAATGGTTTTTGTCTTCCCAGATTGGCTCAGCATGGGGCCACTGCTCCACCTAGAGACAAGGTTGTCATTCAAGGGGATGGAAATCCCAAGGTAATTTTCAACAAGGAAGAAGACATTGCCACCTACACCATTAAAGCAGTGGATGATCCAACAACTTTGAACAAAATTCTCTACATTAAGCCCCCTCAAAATGTCCTCTCAATCAATGAACTTGTGGCCCTTTGGGAAAACAAAATTGCTAAAACTCTTCACAAAACCTACATTTCAGAAGACCAATTATTGAAGAATATTCAAGAGGCAACATATCCATTGAATTTGATGCTAGCTTTTGATTACTCAATATTTGTGAAGGGAGATCATAAGGCCAACCAAGAAATTGAAGCATCTGTTGGATTGGAAGCTACAAAATTGTATCCAGAAGTTAAATACACCACTGTTGATCAATATCTCAATCAATTTGTTTAACTCATATCTCTCTATCTTTACCATTTTCAAAGTTGGATATAAATACTCTTTCTTGTAGACTTTTTTTTTTTTAATCGAATCATCAACTTTTGAAATGATATGATGTCTTTGTCGACTAGGAGTCTAAGTGTGAAGCTAATTTGTTTAAGACATTGTAACTATTCCCGAACCTCAGGACCGGATGTGGCTTGAAGCTTGTATCTCTTTCATCAATGATATTATAACTATTGTAACA 1484 39.22 MASKSRILVVGSTGYIGKFIVEASAKAGHPTFALVRDSALSDPAKSQIIQSFKNIGVIIVSGDLFDHESLVKAIKEVDVVISTVGLNQLSDQDKLISAIKEAGNVKRFFSSEFGFDVENVHGIGPVKSIFEAKVKIRRAVEAEGIPYTYVLSYYFNGFCLPRLAQHGATAPPRDKVVIQGDGNPKVIFNKEEDIATYTIKAVDDPTTLNKILYIKPPQNVLSINELVALWENKIAKTLHKTYISEDQLLKNIQEATYPLNLMLAFDYSIFVKGDHKANQEIEASVGLEATKLYPEVKYTTVDQYLNQFV 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 45261297 45271166 + XM_039031758.1 Bhi05g01246 35456

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01246 309 PANTHER ISOFLAVONE REDUCTASE HOMOLOG P3-RELATED 3 309 - -
Bhi05g01246 309 Gene3D - 154 305 - -
Bhi05g01246 309 PANTHER PINORESINOL REDUCTASE-RELATED 3 309 - -
Bhi05g01246 309 Gene3D - 6 295 - -
Bhi05g01246 309 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 267 IPR036291 -
Bhi05g01246 309 CDD PCBER_SDR_a 6 304 IPR045312 GO:0016491
Bhi05g01246 309 Pfam NmrA-like family 7 299 IPR008030 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01246 K23050 PCBER1; phenylcoumaran benzylic ether reductase [EC:1.3.1.-] - csv:101210381 549.28
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01246 Bhi-Chr5:45261297 Bhi10g01996 Bhi-Chr10:49889829 2.83E-147 dispersed
Bhi05g01245 Bhi-Chr5:45189667 Bhi05g01246 Bhi-Chr5:45261297 2.06E-154 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g364 . . . . . . . . . . . . . . Sed04g3917 . . Bhi05g01246 Tan02g0783 Cmetu01g1193 . Hepe02g0490 . . . . . . . . . . . . Cone10ag0970 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000111 5 10 6 7 3 10 5 11 9 7 10 9 5 7 11 5 9 5 6 10 8 9 7 8 12 9 8 7 9 7 234
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi05g01246 Bhi_Chr05 FPKM 4.954128 3.100475 1.757262 2.401107 1.552008 1.444155 1.455228 2.810927 3.242953 2.41233