Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01315 CCCACCCTCTCACTACCCTCTGCAATTACTCTTCTCTCCCACTTTTTTTTCCCTCTCCACACCCACTTTCTCCTTCTCTCTTTCTCAACACATCAACACCACTCCACTCCCAATAACATAACCTTTTTCTTCTTCTTCTTCTTCTTTCTTCTTCACAATTTTGAGTCTTTGATCTTCATTTCTTCTTTCTCTTCTTGTTTTTTTGGTTTTCTTTCATGAATCCACAATTTGGTAATTTTGTGTGTGTTTTTGTTTTTGTGAAGTATTTATAGAGTTAGATTTCATCTCTTTTCCTTTTACAATTCTCTTTATCTTTTTCAACCATACACAGAGAAAAAGAAAGTGAATTATTTGTCCCCAAGAAAAAAAGTCCACTTTACTTTGAGAGAATCTCAAAAAAGTTGAAAGAAACATCTTTTTTTTTTGTTGTTGTTGTTTTTTTTTTTTTAAAAAAAAAATCTCTCTCCCACCATAAAAGAAAATGAAGTATTTTCTCTAGAAAAGAAAAAAAAAATTGTAATTTTTTTTTCCCTTGAGAAGAAAATGCCAGCCGGAATGATGATTCCAGCGAGAAACATGGCATCGTCGATGATCGGAAGGAATGGAAATGTTGGGATTTTTGGCTCTCCAGCCAGCCTTGTTCTTGGTCAGGAGATAGGAGGAGTGGAAATGGGAGAAAATGAATATGGAAGAATGAGAGAAGCAGAAGAATTAGAGAGTGGCACAAAATCAAGCAGCGAGAACCACGAGGTCGGTTCTGGTGATGACCAACTCAACCAACGCCCCAAGAAGAAGCGTTACCACCGCCACACTCAGCATCAGATCCAACAAATGGAAGCGTTCTTCAAGGAATGTCCTCACCCAGATGACAAGCAAAGGAAGGAGCTGAGTAGAGAGTTGAATTTAGAGCCATTGCAAGTCAAGTTTTGGTTCCAAAACAAACGAACTCAGATGAAGACCCATCATGAGCGACATGAAAACACCCAGCTACGAACAGAAAATGAGAAGCTACGAGCAGATAATATGAGATACAGAGAAGCTTTGGGTAATGCCACGTGTCCCAATTGTGGAGGTCCGACCGCCATTGGAGAGATGTCCTTTGACGAACATCATCTCAGGCTTGAAAATGCCCGCTTGAGAGAAGAGATCGATCGAATTTCAGCCATAGCAGCAAAATACGTTGGAAAGCCAGTATCAAACTACCCTCTTCTTTCCACACCAATTCCTTCACGTCCTTTAGAAATTGGAATGGGAAGTTATGGAGGCCACGACGCCGGCCTCGGACCCGGAGGCGGGGACATGTACGGTGCAGCAGACCTTCTTCGGACCATAAGCGCGCCATCGGAGGCCGACAAGCCGATAATCATCGAGCTTGCGGTTGCAGCCATGGAGGAACTAGTCCGAATGGCTCAGATGGGTGAGCCATTATGGATGACAGGGCTTGATGGGTCAACGGCTGTGCTTAATGAAGAGGAATATGTTAGAAGCTTTCCTAGAGGAATTGGTCCTAAGCCTTCTGGGTTTAGCTGCGAAGCTTCTCGTGCTACTGCTGTTGTCATTATGAATCATATTAGCCTGGTTGAGATGCTCATGGATGTGAATCAATGGTCAACAATATTCACTGGGATAGTGTCAAGAGCTATGACATTAGAAGTATTATCAACCGGCGTCGCTGGGAACTACAACGGAGCATTACAAGTGATGACATCCGAATTGCAAGTGCCTTCGCCTCTTGTTCCAACTCGGGAGAGCTATTTCGTGAGATATTGTAAACAACATGGTGAGGGAACATGGGCTGTGGTTGACGTCTCCTTGGACAATTTACGCCCAGCTCCTGCACTTAGATGTAGAAGGCGGCCATCCGGCTGCTTAATCCAAGAAATGCCCAATGGCTATTCTAAGGTTACATGGGTTGAGCATGTTGAGGTGGATGATCGTGGGGTCCACAGTTTATACAATCAGCTAGTTAGCTCTGGCCACGCGTTCGGTGCAAAGCGTTGGATTGCCACGTTGGATCGTCAGTGTGAACGACTCGCTAGTGCCATGGCCACAAGTATTCCTACCGGTGATGCTGGAGTGATAACAAATCAAGAAGGAAGAAAAAGCATGTTGAAGCTGGCTGAGAGAATGGTGATGAGCTTTTGCGGCGGAGTGAGTGCGTCGACCACACATACTTGGACGACTTTGTCTGGAACTGGAGCTGACGACGTTAGAGTTATGACGAGAAAGAGCATTGACGATCCCGGCAGACCTCCCGGCATTGTCCTTAGTGCCGCCACTTCCTTTTGGCTTCCTCTTCCTCCCAACAGAGTCTTCCATTTTCTCAGAGATGAAAATTCTCGTAATGAGTGGGATATTCTTTCAAATGGTGGAGTTGTTCAAGAAATGGCTCACATTGCCAATGGCCGCGACACAGGCAACTGTGTCTCGTTGCTACGAGTTAACAGTGCAAATTCAAGCCAAAGCAACATGTTAATACTACAAGAAAGCAGCACAGACCAAACAGCCTCGTTTGTGATCTACGCGCCGGTGGACATTGTGTCCATCAACGTCGTGCTAAACGGCGGCGATCCCGATTATGTGGCCCTTCTCCCTTCTGGATTTGCCATTCTCCCCGACGGAACCACCGCGTCAAGCAGCGGCGGCGTCAATGGCGTGGCGGAACATGGGTCCGGGGGGTCGCTTTTAACGGTGGCGTTTCAAATTTTGGTTGACTCGGTTCCTACAGCAAAACTGTCTCTTGGGTCAGTTGCAACGGTCAACAATCTCATTGCGTGTACGGTTGAAAGGATTAAAGCCTCTTTGTCATGCGATAATCCTTGAAGCCCTCACCCTCAATTTCGCAACCTCGGAAGGAAAAAGATGAGTGGAAGAAGTCAAGAACGCACCTCGAAATGTAGAAGGAAGAAATTATTTAAAGTTGGGTAAGCATTTAATGGTGGGGGGTTCGGGTATTGACTTTCTCCATTATTATTATTAATATTATTAATGTATCTAAAAGTTTATGGTAATTTTTCTTGCTTTAGAAAAAAAAAAGAAGTTTATGGTAATTTTAGGGTTTTGGGAGTATCAGTTTCTTCATGGCATAATTCTGTTGTGTTTTTAATTTATTTTATAGTTTTCCAATGTGTTCATTATTAGAGAGAGGGTGTGGGGAAGCCCTTACCCTAATGCCTCTCTATATATATAAGTATAATATAACATTTCCAAGTTGTTTTCCCCCCAAAATTTACCTTCATTAAATCAAGTTGATTGTGTATTATCTCA 3267 43.68 MPAGMMIPARNMASSMIGRNGNVGIFGSPASLVLGQEIGGVEMGENEYGRMREAEELESGTKSSSENHEVGSGDDQLNQRPKKKRYHRHTQHQIQQMEAFFKECPHPDDKQRKELSRELNLEPLQVKFWFQNKRTQMKTHHERHENTQLRTENEKLRADNMRYREALGNATCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVSNYPLLSTPIPSRPLEIGMGSYGGHDAGLGPGGGDMYGAADLLRTISAPSEADKPIIIELAVAAMEELVRMAQMGEPLWMTGLDGSTAVLNEEEYVRSFPRGIGPKPSGFSCEASRATAVVIMNHISLVEMLMDVNQWSTIFTGIVSRAMTLEVLSTGVAGNYNGALQVMTSELQVPSPLVPTRESYFVRYCKQHGEGTWAVVDVSLDNLRPAPALRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHSLYNQLVSSGHAFGAKRWIATLDRQCERLASAMATSIPTGDAGVITNQEGRKSMLKLAERMVMSFCGGVSASTTHTWTTLSGTGADDVRVMTRKSIDDPGRPPGIVLSAATSFWLPLPPNRVFHFLRDENSRNEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESSTDQTASFVIYAPVDIVSINVVLNGGDPDYVALLPSGFAILPDGTTASSSGGVNGVAEHGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCDNP 759
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 46309184 46317896 - XM_039032764.1 Bhi05g01315 35525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01315 759 CDD homeodomain 83 141 IPR001356 GO:0003677
Bhi05g01315 759 ProSiteProfiles START domain profile. 267 499 IPR002913 GO:0008289
Bhi05g01315 759 MobiDBLite consensus disorder prediction 53 92 - -
Bhi05g01315 759 CDD START_ArGLABRA2_like 271 495 - -
Bhi05g01315 759 SUPERFAMILY Homeodomain-like 67 139 IPR009057 -
Bhi05g01315 759 Coils Coil 146 166 - -
Bhi05g01315 759 SMART HOX_1 81 144 IPR001356 GO:0003677
Bhi05g01315 759 Gene3D - 68 157 - -
Bhi05g01315 759 SUPERFAMILY Bet v1-like 269 498 - -
Bhi05g01315 759 ProSitePatterns 'Homeobox' domain signature. 115 138 IPR017970 GO:0000981|GO:0006355
Bhi05g01315 759 ProSiteProfiles 'Homeobox' domain profile. 80 140 IPR001356 GO:0003677
Bhi05g01315 759 SMART START_1 276 496 IPR002913 GO:0008289
Bhi05g01315 759 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 47 756 - -
Bhi05g01315 759 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 47 756 IPR042160 -
Bhi05g01315 759 Pfam START domain 277 496 IPR002913 GO:0008289
Bhi05g01315 759 SUPERFAMILY Bet v1-like 515 751 - -
Bhi05g01315 759 Pfam Homeodomain 83 138 IPR001356 GO:0003677
Bhi05g01315 759 Gene3D - 310 493 IPR023393 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi05g01315 Bhi10g01447 CCT
Bhi05g01315 Bhi10g01447 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g03413 Bhi-Chr1:86204778 Bhi05g01315 Bhi-Chr5:46309184 0 dispersed
Bhi03g00563 Bhi-Chr3:10952068 Bhi05g01315 Bhi-Chr5:46309184 0 dispersed
Bhi05g01315 Bhi-Chr5:46309184 Bhi10g01448 Bhi-Chr10:34590065 0 dispersed
Bhi08g01980 Bhi-Chr8:57139252 Bhi05g01315 Bhi-Chr5:46309184 0 dispersed
Bhi09g01924 Bhi-Chr9:53560324 Bhi05g01315 Bhi-Chr5:46309184 5.33E-126 dispersed
Bhi10g00545 Bhi-Chr10:11992890 Bhi05g01315 Bhi-Chr5:46309184 2.28E-27 dispersed
Bhi10g00546 Bhi-Chr10:11992890 Bhi05g01315 Bhi-Chr5:46309184 2.21E-27 dispersed
Bhi05g00164 Bhi-Chr5:3351951 Bhi05g01315 Bhi-Chr5:46309184 2.57E-18 transposed
Bhi10g01447 Bhi-Chr10:34590065 Bhi05g01315 Bhi-Chr5:46309184 0 wgd
Bhi03g00562 Bhi-Chr3:10952068 Bhi05g01315 Bhi-Chr5:46309184 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1203 PF01852 START 5.00E-58 CL0209 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01315 K09338 - csv:101219415 1432.93