Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01318 TTCACTGTGACATGGGCAACCTTTATTCAATGCTCTCATTTCTTTAACAATTGGTTCCTGAATTCCACGCTTATTATCCCATTCTCAATCTAGGAAGTGGGCACCCAGTTCCCCTTAGATTGAAACACAACTAAGCTAATTATCCTGTACCAAATTTTTGGTCTTTTTTATTCAATATCATTCATTCACAAGAAACCCTTTATAGTTGAGGGCATCTTTGTGAATTATAGAGCTTGAATGGTTAATTTTGCCGCTCTGCCGCTGCTTTTGCATACTTTGATATGGCTGTTTCAGCTCACTGGTCCGATCTGCTGCCAAAAACCTACTGTGGTAAACGTTGGTGCGGTTTTCACTTTCAATTCCGTCATCGGCAGAGCAGCAAAGCCGGCGATGAAAGCAGCAATTTCCGACATAAACGCTGACCCCAACATCTTGAATGGCACAAAGCTTAACTTCTTCATGGAAGACTCTAATTGTAGTGGCTTCTTGGGCTCCGTTGAAGCTTTGCAGGTACTTGAGAAAGAAATTGTAGCCATGATTGGCCCACAATCCTCAGTAGTGGCTCATGTGATTTCTCAAATTGTTAATGGTTTACAAATTCCTCAAGTATCCTATGCTGCCACTGATCCAACATTATCCACTCTGCAACTCCCTTTTTTCCTCCGAACAACTGTAAGTGACTCTTACCAAATGGCTGCCATGGCTGACTTGATTGATTATTATGGCTGGAAAGAAGTCATTGCTATATTTTTGGATGATGATTATGGTAGAAATGGGATATCTTTTCTGGGTGATGAACTTCAGAAAAAAATGTGTCGTATTTCTCATGAATACCCTTTGCCTTCTCTGGCTAATCTTACTAAGATCACACAAATACTTAACAATTCTAAATTACTTGGTCCTCGTGTTTATGTAGTTCATGTAGGCCCTGATCCCCAATTGAGAATCTTCACCATTGCCCATAAACTTGGTATGCTTACAAGTAATTACATTTGGTTCGCAACCGATTGGCTTTCTACAACTCTTGATTCTTCTTCACCAATAACCAATGGTGCTTCGCTTGATATACTTAACGGAGTCGTGGGGCTGCGCCCTCATACTCCAGAGTCTAAAAGAAAGAGAGATTTGTGGGATCGGTTGAGAAAAACGCAGCCAAAAGGTTTAACAAATTCTGTGTTGAATGTTTATGGACTGTATGCTTATGATTCAGTATGGATTGTTGCAAAGGCAGTGGATAAGTTTATCAAAGAAAATGGGAATATTATCACATTTTCATCCACAGGGAAAGTTTTTGGCTCTAATGAAAGTGGAATTCAACTGGGTAAGCTTAAAGTGTTTGATGGAGGAAGTGATTTACTTAGAATTCTTATGCAAACAGATTACAATGGTTTAAGTGGGAGAATTCAGTTTGGTGAAGACAGAAATGTTGTTAATGGTAGCTACGATGTGATTAATATTGATCAAAGGAAAATTCGTTTGGTGGGTTATTGGTCTAATAACTCAAGATTTAAGCTTGAGAATGTTGTTTGGCCTGGTGGGAAGTCAGAAATACCAAGGGGTTGGGTGATTGCAGATGCTGGAAAACCTCTGAGAATTGCATTCCCAAAAAGAGCAAGCTTTGTTGATTTTGTTACTCAATTGAACAACACTAATATTGTTCGAGGATATGTTATTGATATATTCAAAGAAGCACTCAAGTTTGTTCCATATGAAGTTCCTTACAAACTTGTGCCTTTTGGGGATGGTCGAGTCAATCCCAGTTATGATGAACTTGTTCAATCGGTTGCAAATAATGTGTTTGATGCAGCAGTTGGGGACATTGCTATCGTCACGAACCGAACAAAGATAGTCGATTTTTCTCAACCATATACCACAACAGGGCTGATCATGGTTGCACCAGTTAAAGATTCAAAATCAAGTGCTTGGGTGTTTCTTAAACCATTTACAGTGGAGATGTGGTGTGCAACAGCAGGTTCATTTGTGGTAATTGGGATTGTTATTTGGATGTTGGAGCACAGAATCAACGACCATTTTCGAGGCCCTCCCAAAAGGCAGATTATCACAATGTGTTTGTTCAGCTTTTCAACTCTATTCAAGGCTAATCAAGAAGCAACAATTAGCCCACTTTCTCGACTGGTGATGTTGGTGTGGCTGTTCTTGTTATTGGTAATAACCTCAAGCTACACAGCAAGTTTGACATCAATCCTTACGCTTCAGCAACTTTGGTCTCCAATACGAGGAATTGATGACTTGGTTGCAAGTAACTTGCCAATTGGGTATCAGGTAGGATCCTTTGCTTATGACTATCTTACACAATCCCTTTTCATACCAAGTTCCAGATTGAAAAAGCTGGACTCCCCTGAAGACTACGAGAAAGCACTGCGCCTTGGCCCAAGAGGAGGTGGTGTGGCAGCCATCATTGATGAACTTCCATATTTGGAGTTGTTTCTGTCTAAGACTAAAGAATTTGGAATGATTGGTCAACCTTTTACAAGGAGCGGATGGGGATTTGCTTTTCAAAGAGGATCTCGACTTGCAGTTGATATGTCAACTGCAATTTTGAGACTCTCGGAGAGTGGAAAGCTCCAAGAAATACACAACTCGTGGTTCTGTAAGCTAGGTTGTCCGGGAAATCGGGGAGGAAAGTCAGAGCTAGACCAACTTCACTTGATCAGTTTCTGGGGTTTGTATTTGCTTTGTGGAATCATTTCCCTTGCTGCACTCTTCCTGTTTCTTTTAAAACTAATATGCCAGTATATCCGCTATAAACGGCACCATCGGCGTCGTCATTCAGAGGAAGTTACACCATTCCCTGTTCCATCCAACACTAGCTGTACTCAGACCATACAAAACTTTATAGGCTTTATTGACGAGAGGGAAGAAGCCATCAAGAGCTTCTTCCGAACATCACATGGTGCTCAAAATGGGAACCAACTCCCCATTCGTTCCCAAAAGGCCAAGGAGAAGGCTGATTCCGAGATAGAGGTAGGGACCTCGGGTATGAATCGGGGATAGACTTTTGCCTGCCATTTGGTTCTTCATAATTTCTTAGGTGGATTTCTTGGTGAAGCATGTACATTAAATCCCATAATATCGAACTAAAATTGTAGCATAGTAAATATCTTACCTTGTATCTAAATTGGTCAAAGCATCTCAGAAATTTAGATTCTATTAGATAACTATTTTTGAGCCATTACAATT 3201 40.39 MVNFAALPLLLHTLIWLFQLTGPICCQKPTVVNVGAVFTFNSVIGRAAKPAMKAAISDINADPNILNGTKLNFFMEDSNCSGFLGSVEALQVLEKEIVAMIGPQSSVVAHVISQIVNGLQIPQVSYAATDPTLSTLQLPFFLRTTVSDSYQMAAMADLIDYYGWKEVIAIFLDDDYGRNGISFLGDELQKKMCRISHEYPLPSLANLTKITQILNNSKLLGPRVYVVHVGPDPQLRIFTIAHKLGMLTSNYIWFATDWLSTTLDSSSPITNGASLDILNGVVGLRPHTPESKRKRDLWDRLRKTQPKGLTNSVLNVYGLYAYDSVWIVAKAVDKFIKENGNIITFSSTGKVFGSNESGIQLGKLKVFDGGSDLLRILMQTDYNGLSGRIQFGEDRNVVNGSYDVINIDQRKIRLVGYWSNNSRFKLENVVWPGGKSEIPRGWVIADAGKPLRIAFPKRASFVDFVTQLNNTNIVRGYVIDIFKEALKFVPYEVPYKLVPFGDGRVNPSYDELVQSVANNVFDAAVGDIAIVTNRTKIVDFSQPYTTTGLIMVAPVKDSKSSAWVFLKPFTVEMWCATAGSFVVIGIVIWMLEHRINDHFRGPPKRQIITMCLFSFSTLFKANQEATISPLSRLVMLVWLFLLLVITSSYTASLTSILTLQQLWSPIRGIDDLVASNLPIGYQVGSFAYDYLTQSLFIPSSRLKKLDSPEDYEKALRLGPRGGGVAAIIDELPYLELFLSKTKEFGMIGQPFTRSGWGFAFQRGSRLAVDMSTAILRLSESGKLQEIHNSWFCKLGCPGNRGGKSELDQLHLISFWGLYLLCGIISLAALFLFLLKLICQYIRYKRHHRRRHSEEVTPFPVPSNTSCTQTIQNFIGFIDEREEAIKSFFRTSHGAQNGNQLPIRSQKAKEKADSEIEVGTSGMNRG 925
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 46368948 46375663 - XM_039030914.1 Bhi05g01318 35528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01318 925 Pfam Receptor family ligand binding region 49 408 IPR001828 -
Bhi05g01318 925 MobiDBLite consensus disorder prediction 895 925 - -
Bhi05g01318 925 Gene3D - 453 561 - -
Bhi05g01318 925 Gene3D - 739 798 - -
Bhi05g01318 925 Pfam Bacterial extracellular solute-binding proteins, family 3 470 791 IPR001638 -
Bhi05g01318 925 Pfam Ligand-gated ion channel 792 823 IPR001320 GO:0015276|GO:0016020
Bhi05g01318 925 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 45 61 - -
Bhi05g01318 925 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 105 133 - -
Bhi05g01318 925 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 236 259 - -
Bhi05g01318 925 CDD PBP1_GABAb_receptor_plant 33 425 IPR044440 -
Bhi05g01318 925 SMART GluR_14 450 793 IPR001320 GO:0015276|GO:0016020
Bhi05g01318 925 PIRSF IGluLR_plant 1 920 IPR017103 -
Bhi05g01318 925 PANTHER GLUTAMATE RECEPTOR 3.7 16 896 - -
Bhi05g01318 925 SUPERFAMILY Periplasmic binding protein-like II 429 791 - -
Bhi05g01318 925 Gene3D - 562 694 - -
Bhi05g01318 925 Gene3D - 147 422 - -
Bhi05g01318 925 CDD GluR_Plant 449 791 - -
Bhi05g01318 925 Gene3D - 51 399 - -
Bhi05g01318 925 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 16 896 - -
Bhi05g01318 925 SUPERFAMILY Periplasmic binding protein-like I 25 443 IPR028082 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01318 Bhi-Chr5:46368948 Bhi10g01429 Bhi-Chr10:34383226 0 dispersed
Bhi05g01318 Bhi-Chr5:46368948 Bhi05g01319 Bhi-Chr5:46368948 0 tandem
Bhi10g01428 Bhi-Chr10:34383226 Bhi05g01318 Bhi-Chr5:46368948 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01318 K05387 - csv:101203158 1639.4