Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01345 GAAGTAGTGTTGTGTTGTTCGTCAAGTCTTCCCTTCCAAATTTATAGCCGAGTCCATTGAAACGGTTTGAAAGAAAAAGTGTGTTCTTTTAAGATCTATGGGCAAACCAAGTGGACTCTCCATTGATTCAGATCCATTCTTTCTCTTCTTTTCTTTTTATCCACTCTTCACCTAAATCAACCACCACCACCACCACCACCACCACCGTCTCGCCGCCATGGACGCCGCCGCCCCTTCCCTTTCCTCCTCTGCCCACTCCCACTCCCCTCCAATTTCCGGTTAACCTCAATTCCACCTCCCCGATCCCACGATTCTCCTCCTCCGCCGCCCCTCCTCCCCTCCACCGCCCCCGCCTCCTCCCCCTCCTCCACCGCTCTTTCTTGACGAAATGAACTTCTTCCCCGCCGATGATAAATCCCGCGTTCTTCTCTCTGCTTCTCACTCCAATCTCACTCCAATCAAACTCGACTTCAATGTTAACACGGGGTTGAATCTTTTGACGACGAATTCCTGTAGCGATCAATCCATGGTAGACGATGGAGTTTCACCAAACCCAGAAGAAAAAAGAGTAAAAAATGAGAGAGCAGTTCTTCAAGCTGAATTAGAGAGGATAAATTCAGAGAATCTAAGATTAAAAGACATGTTAAATCAAGCGACGACCAATTACCAAGCGCTGCAGATGCAATTCAACACACTAATTCAAACTCAGAAAACAGAGGAGGCTGGTGACCCGATTGAGGAAAACGCCGACGGCGGCAGAGGGAACAATAACAACAATAATATTATTAGTAATAAGCTGGTGCCCAGACAATTTATGGATCTTGGACTGGCAACCAATATGGAAATGGATGAGCCATCGATGTCGTCATCGGAAGGGAGAAGTGGAGAGAGACCCCGGTCACCGGGAACCACCGGAGAAGTAGCGTCCTCGAAACGGCATAGCCCAGATCAATCTTCCAATTGGGGTTCCAATAATAATAACAACAACAATAAAGTTCCTAAATTCAATTCTTCTTCGGGTAAAGATGTGGATCAAACTGAAGCTACCATGAGAAAGGCTAGAGTCTCCGTTCGAGCCAGATCAGAAGCACCCATGATAACAGATGGATGTCAATGGAGAAAATATGGACAAAAAATGGCGAAGGGAAACCCTTGTCCACGAGCTTACTACCGGTGCACAATGGCCGCCGGCTGCCCAGTTAGAAAACAAGTACAAAGATGTGCAGAAGACAAAACAATTTTGATAACCACCTACGAAGGAAACCACAACCACCCATTGCCGCCGGCTGCCATGGCAATGGCTTCCACAACTTCATCGGCGGCCAGAATGCTTCTATCAGGATCCATGTCAAGTGCAGACGGTTTAATGAACTCAAATTTTCTAGCAAGAACCCTATTGCCATGTTCTTCAAGCATGGCTACAATCTCAGCCTCAGCTCCATTTCCCACTGTCACATTGGACCTAACTCAAAACCCTAATTCTTTATTCCAACGCCCCACCACCGGTCACTTCCCGATCCCGTTTGCGGCCGGTCCACCCCAAAACTTCCCGCAGATCTTCGGACATGCATTGTACAATCAATCAAAATTCTCCGGCCTCCAAATGTCGAAGGATATTGAGGCACCACCGCCACCTCCACCACAGCAAAATCCATTGGCCGACACATTGACCGCAGCGGGTGCAGCGATCGCTTCCGACCCGAATTTCATTGCTGCATTGGCTACGGCGATGACGTCGTTGATCGGCGGACCGCATCATCAAAAGGAGAATGGTAATGGCAATAGTAATGTTGATAATAATACAAGTAGCAACTCCCAACAGTAACACCAAGAACAACAACATGATTCAAAGGTTATAATTGCCATTTTTCAGAACCAAGAAAAGAACTTTTTTTTTCTTTTTTAAATATATA 1913 46.73 MNFFPADDKSRVLLSASHSNLTPIKLDFNVNTGLNLLTTNSCSDQSMVDDGVSPNPEEKRVKNERAVLQAELERINSENLRLKDMLNQATTNYQALQMQFNTLIQTQKTEEAGDPIEENADGGRGNNNNNNIISNKLVPRQFMDLGLATNMEMDEPSMSSSEGRSGERPRSPGTTGEVASSKRHSPDQSSNWGSNNNNNNNKVPKFNSSSGKDVDQTEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDKTILITTYEGNHNHPLPPAAMAMASTTSSAARMLLSGSMSSADGLMNSNFLARTLLPCSSSMATISASAPFPTVTLDLTQNPNSLFQRPTTGHFPIPFAAGPPQNFPQIFGHALYNQSKFSGLQMSKDIEAPPPPPPQQNPLADTLTAAGAAIASDPNFIAALATAMTSLIGGPHHQKENGNGNSNVDNNTSSNSQQ 478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 47294430 47298067 - XM_039033096.1 Bhi05g01345 35555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01345 478 MobiDBLite consensus disorder prediction 459 478 - -
Bhi05g01345 478 MobiDBLite consensus disorder prediction 153 231 - -
Bhi05g01345 478 SMART WRKY_cls 237 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi05g01345 478 MobiDBLite consensus disorder prediction 453 478 - -
Bhi05g01345 478 Coils Coil 58 99 - -
Bhi05g01345 478 Pfam WRKY DNA -binding domain 239 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi05g01345 478 PANTHER OS05G0567200 PROTEIN 12 475 - -
Bhi05g01345 478 MobiDBLite consensus disorder prediction 153 215 - -
Bhi05g01345 478 SUPERFAMILY WRKY DNA-binding domain 230 298 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi05g01345 478 MobiDBLite consensus disorder prediction 114 135 - -
Bhi05g01345 478 ProSiteProfiles WRKY domain profile. 232 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi05g01345 478 Gene3D WRKY domain 222 299 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi05g01345 478 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 12 475 IPR044810 GO:0003700
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01345 Bhi-Chr5:47294430 Bhi05g01347 Bhi-Chr5:47294430 0 dispersed
Bhi05g01345 Bhi-Chr5:47294430 Bhi05g01346 Bhi-Chr5:47294430 0 tandem
Bhi01g01645 Bhi-Chr1:34473178 Bhi05g01345 Bhi-Chr5:47294430 5.20E-51 transposed
Bhi03g00611 Bhi-Chr3:11702517 Bhi05g01345 Bhi-Chr5:47294430 3.26E-166 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1205 PF03106 WRKY 2.10E-24 CL0274 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01345 - - csv:101205587 748.043