Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01347 TTTGAAGTAGTGTTGTGTTGTTCGTCAAGTCTTCCCTTCCAAATTTATAGCCGAGTCCATTGAAACGGTTTGAAAGAAAAAGTGTGTTCTTTTAAGATCTATGGGCAAACCAAGTGGACTCTCCATTGATTCAGATCCATTCTTTCTCTTCTTTTCTTTTTATCCACTCTTCACCTAAATCAACCACCACCACCACCACCACCACCACCGTCTCGCCGCCATGGACGCCGCCGCCCCTTCCCTTTCCTCCTCTGCCCACTCCCACTCCCCTCCAATTTCCGGTTAACCTCAATTCCACCTCCCCGATCCCACGATTCTCCTCCTCCGCCGCCCCTCCTCCCCTCCACCGCCCCCGCCTCCTCCCCCTCCTCCACCGCTCTTTCTTGACGAAATGAACTTCTTCCCCGCCGATGATAAATCCCGCGTTCTTCTCTCTGCTTCTCACTCCAATCTCACTCCAATCAAACTCGACTTCAATACGGGGTTGAATCTTTTGACGACGAATTCCTGTAGCGATCAATCCATGGTAGACGATGGAGTTTCACCAAACCCAGAAGAAAAAAGAGTAAAAAATGAGAGAGCAGTTCTTCAAGCTGAATTAGAGAGGATAAATTCAGAGAATCTAAGATTAAAAGACATGTTAAATCAAGCGACGACCAATTACCAAGCGCTGCAGATGCAATTCAACACACTAATTCAAACTCAGAAAACAGAGGAGGCTGGTGACCCGATTGAGGAAAACGCCGACGGCGGCAGAGGGAACAATAACAACAATAATATTATTAGTAATAAGCTGGTGCCCAGACAATTTATGGATCTTGGACTGGCAACCAATATGGAAATGGATGAGCCATCGATGTCGTCATCGGAAGGGAGAAGTGGAGAGAGACCCCGGTCACCGGGAACCACCGGAGAAGTAGCGTCCTCGAAACGGCATAGCCCAGATCAATCTTCCAATTGGGGTTCCAATAATAATAACAACAACAATAAAGTTCCTAAATTCAATTCTTCTTCGGGTAAAGATGTGGATCAAACTGAAGCTACCATGAGAAAGGCTAGAGTCTCCGTTCGAGCCAGATCAGAAGCACCCATGATAACAGATGGATGTCAATGGAGAAAATATGGACAAAAAATGGCGAAGGGAAACCCTTGTCCACGAGCTTACTACCGGTGCACAATGGCCGCCGGCTGCCCAGTTAGAAAACAAGTACAAAGATGTGCAGAAGACAAAACAATTTTGATAACCACCTACGAAGGAAACCACAACCACCCATTGCCGCCGGCTGCCATGGCAATGGCTTCCACAACTTCATCGGCGGCCAGAATGCTTCTATCAGGATCCATGTCAAGTGCAGACGGTTTAATGAACTCAAATTTTCTAGCAAGAACCCTATTGCCATGTTCTTCAAGCATGGCTACAATCTCAGCCTCAGCTCCATTTCCCACTGTCACATTGGACCTAACTCAAAACCCTAATTCTTTATTCCAACGCCCCACCACCGGTCACTTCCCGATCCCGTTTGCGGCCGGTCCACCCCAAAACTTCCCGCAGATCTTCGGACATGCATTGTACAATCAATCAAAATTCTCCGGCCTCCAAATGTCGAAGGATATTGAGGCACCACCGCCACCTCCACCACAGCAAAATCCATTGGCCGACACATTGACCGCAGCGGGTGCAGCGATCGCTTCCGACCCGAATTTCATTGCTGCATTGGCTACGGCGATGACGTCGTTGATCGGCGGACCGCATCATCAAAAGGAGAATGGTAATGGCAATAGTAATGTTGATAATAATACAAGTAGCAACTCCCAACAGTAACACCAAGAACAACAACATGATTCAAAGGTTATAATTGCCATTTTTCAGAACCAAGAAAAGAACTTTTTTTTTCTTTTTTAAATATATA 1910 46.7 MNFFPADDKSRVLLSASHSNLTPIKLDFNTGLNLLTTNSCSDQSMVDDGVSPNPEEKRVKNERAVLQAELERINSENLRLKDMLNQATTNYQALQMQFNTLIQTQKTEEAGDPIEENADGGRGNNNNNNIISNKLVPRQFMDLGLATNMEMDEPSMSSSEGRSGERPRSPGTTGEVASSKRHSPDQSSNWGSNNNNNNNKVPKFNSSSGKDVDQTEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDKTILITTYEGNHNHPLPPAAMAMASTTSSAARMLLSGSMSSADGLMNSNFLARTLLPCSSSMATISASAPFPTVTLDLTQNPNSLFQRPTTGHFPIPFAAGPPQNFPQIFGHALYNQSKFSGLQMSKDIEAPPPPPPQQNPLADTLTAAGAAIASDPNFIAALATAMTSLIGGPHHQKENGNGNSNVDNNTSSNSQQ 476
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 47294430 47298070 - XM_039033097.1 Bhi05g01347 35557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01347 476 MobiDBLite consensus disorder prediction 151 213 - -
Bhi05g01347 476 Pfam WRKY DNA -binding domain 237 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi05g01347 476 SMART WRKY_cls 235 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi05g01347 476 MobiDBLite consensus disorder prediction 112 133 - -
Bhi05g01347 476 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 16 473 IPR044810 GO:0003700
Bhi05g01347 476 ProSiteProfiles WRKY domain profile. 230 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi05g01347 476 MobiDBLite consensus disorder prediction 457 476 - -
Bhi05g01347 476 PANTHER OS05G0567200 PROTEIN 16 473 - -
Bhi05g01347 476 MobiDBLite consensus disorder prediction 151 229 - -
Bhi05g01347 476 MobiDBLite consensus disorder prediction 451 476 - -
Bhi05g01347 476 SUPERFAMILY WRKY DNA-binding domain 228 296 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi05g01347 476 Gene3D WRKY domain 220 297 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi05g01347 476 Coils Coil 56 97 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01645 Bhi-Chr1:34473178 Bhi05g01347 Bhi-Chr5:47294430 4.46E-51 dispersed
Bhi03g00611 Bhi-Chr3:11702517 Bhi05g01347 Bhi-Chr5:47294430 1.38E-164 dispersed
Bhi05g01345 Bhi-Chr5:47294430 Bhi05g01347 Bhi-Chr5:47294430 0 dispersed
Bhi05g01347 Bhi-Chr5:47294430 Bhi08g01407 Bhi-Chr8:41799321 2.24E-53 dispersed
Bhi05g01346 Bhi-Chr5:47294430 Bhi05g01347 Bhi-Chr5:47294430 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1207 PF03106 WRKY 2.10E-24 CL0274 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01347 - - csv:101205587 746.503