Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi05g01372 | TATTTCTTTCTTCTTAACACATCTTTCAATATTACACTTTCCCCCAAAACTCACTCTTCTTCTCTAAAAAATCCCAGTCAGAAAAAACCCCCCAAAACAAAAACTTCACTCCTCCTCATGGCTCCAATGAACGAGGTTCCATTCCATCGGGAAGGTAAACCCCAAAAAACAAAATTTTTCTAATCAATTTCTACCCTTCTTTCTCTTTCCATTTCACATCTGCTCGTGTGAACCAAAATAAAGTACGAAGAACACTGTTTTTGTTAAGCTTAAATAGCGGGAGATCAAAAAGGGAAGGCCATGGAAGGAGGAGGATCCAGTGGTAGCAGCTGTTCTTTCATGGCTACTTGTAACAGTACCACCACCACCACCAACAACAACAATTCTAACACTCCCATGATGATGATGTTCAATAGTAATAATCCTCAAACATTGGACGACAACAACAATAACAAGATGTTCTTGCCTTTGTCGTGGTCTTCTTCTACTTCCAACAATAATAATAATGCTCAAACTCAAAGGGTTTCTGCTTTTGTTCCTCATCCTCATACTAACAATAATGATGTTCTTACTACTTCAACTTCTAAAGCGAAGATTATGGCTCATCCTCTCTTCCCTCGCCTTCTCGCCGCTTATGTCAACTGTCAAAAGGTGGGTGCGCCACCAGAAGTGGTGGCGAGACTAGAGCAGGCGTGTGCGGTGGCAACGGGAAGCTGTAGGGCGGCGGGACGTGGGGATGATCCAGCATTGGATCAGTTCATGGAGGCTTATTGTGAGATGTTAACCAAATATGAACAAGAGTTGACCAAACCTTTTAGAGAAGCAATGCTTTTCTTCTCAAGAATCGAGTCTCAGCTCAAAGCCTTGGCAGTTCCTTCTGATGGTTTTGAGTTGGTCAGGCAAAACGAGTGCTCGAAGGAGATTGAGGTCGATATGAACGATAACTACATCGACCCTCAAGCCGAAGAGAAGGAACTCAAAGGCCAGCTTCTACGCAAATATAGCGGATATCTTGGTAGCCTAAAACAAGAATTTTTGAAGAAGAAGAAGAATGGAAAGTTGCCAAAAGAAGCTCGACAACAGTTGCTCGACTGGTGGAGTCGACATTACAAATGGCCATACCCCTCGGAGTCGCAAAAGGTGGCGTTAGCGGAGTCAACAGGGCTCGACTTGAAGCAGATCAACAATTGGTTCATTAACCAAAGAAAGCGCCATTGGAAGCCATCAGAGGATATGCAATTTGTGGTGATGGATGCTGCTCATCCACATTACTATTTGGACAATGTCATATGCAATCCTTTCTCTATGGACTGTTCTTCCACTCTTTTCTGATGAGATATGTACCATTTTAATATTGCTTTTGCTTATGTTAATTAATGTCATTTCCCATTTTGTTTTA | 1399 | 42.17 | MEGGGSSGSSCSFMATCNSTTTTTNNNNSNTPMMMMFNSNNPQTLDDNNNNKMFLPLSWSSSTSNNNNNAQTQRVSAFVPHPHTNNNDVLTTSTSKAKIMAHPLFPRLLAAYVNCQKVGAPPEVVARLEQACAVATGSCRAAGRGDDPALDQFMEAYCEMLTKYEQELTKPFREAMLFFSRIESQLKALAVPSDGFELVRQNECSKEIEVDMNDNYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNVICNPFSMDCSSTLF | 343 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 47748136 | 47752635 | - | XM_039031478.1 | Bhi05g01372 | 35582 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi05g01372 | 343 | Gene3D | - | 250 | 312 | - | - | |
Bhi05g01372 | 343 | Pfam | KNOX1 domain | 96 | 133 | IPR005540 | GO:0003677|GO:0005634 | |
Bhi05g01372 | 343 | ProSiteProfiles | ELK domain profile. | 225 | 245 | IPR005539 | GO:0003677 | |
Bhi05g01372 | 343 | PANTHER | HOMEOBOX PROTEIN SBH1-LIKE ISOFORM X1 | 3 | 334 | - | - | |
Bhi05g01372 | 343 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 3 | 334 | - | - | |
Bhi05g01372 | 343 | SUPERFAMILY | Homeodomain-like | 247 | 322 | IPR009057 | - | |
Bhi05g01372 | 343 | ProSitePatterns | 'Homeobox' domain signature. | 283 | 306 | IPR017970 | GO:0000981|GO:0006355 | |
Bhi05g01372 | 343 | SMART | HOX_1 | 247 | 312 | IPR001356 | GO:0003677 | |
Bhi05g01372 | 343 | SMART | KNOX1_2 | 93 | 137 | IPR005540 | GO:0003677|GO:0005634 | |
Bhi05g01372 | 343 | CDD | homeodomain | 257 | 309 | IPR001356 | GO:0003677 | |
Bhi05g01372 | 343 | Pfam | ELK domain | 225 | 246 | IPR005539 | GO:0003677 | |
Bhi05g01372 | 343 | MobiDBLite | consensus disorder prediction | 23 | 70 | - | - | |
Bhi05g01372 | 343 | Pfam | KNOX2 domain | 145 | 189 | IPR005541 | GO:0003677|GO:0005634 | |
Bhi05g01372 | 343 | Pfam | Homeobox KN domain | 265 | 304 | IPR008422 | GO:0003677|GO:0006355 | |
Bhi05g01372 | 343 | SMART | KNOX2_2 | 140 | 191 | IPR005541 | GO:0003677|GO:0005634 | |
Bhi05g01372 | 343 | ProSiteProfiles | 'Homeobox' domain profile. | 245 | 308 | IPR001356 | GO:0003677 | |
Bhi05g01372 | 343 | SMART | ELK_2 | 225 | 246 | IPR005539 | GO:0003677 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi05g01372 | Bhi-Chr5:47748136 | Bhi09g03182 | Bhi-Chr9:81520335 | 3.62E-84 | dispersed | |
Bhi05g01372 | Bhi-Chr5:47748136 | Bhi05g01373 | Bhi-Chr5:47748136 | 0 | tandem | |
Bhi03g00626 | Bhi-Chr3:11851260 | Bhi05g01372 | Bhi-Chr5:47748136 | 3.11E-126 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
1216 | PF03791 | KNOX2 | 4.30E-22 | No_clan | Bhi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi05g01372 | - | - | csv:101205039 | 541.576 |