Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01393 CAATTTCTCTCCTTTGTTACATATATATGAACACTTCTTCCTTTGAGTCCAAACACTTTTACTTCTAGGTGTCTTGTAGATTTGAGAGAGAGTCAATTTTACTAAGAAGACAACAAGAAGAAAAACTTCTTAAGATTTGTTGTTTTGTAAAAGAAAAGGAAGATGTCTGAAGAACAAGCAATTTCAAATCCCTTCATTTGCAGCATCCCATCACTTGGATCAAACAACAACCCTTCTGTTGTCAAGAAGAAGAGAAATCTCCCTGGAAATCCAGATCCTGATGCGGAAGTTGTGTCGTTGTCGCCAAAAACGCTAATGGCAACGAACCGATTCTTGTGTGAGATATGTGGAAAGGGTTTTCAAAGGGATCAAAACCTACAACTGCATAGGAGAGGACACAATCTTCCATGGAAGCTGAAACAAAGAAGCAATGGAAATAAAGAGCCAAGGAAGAGAGTTTATGTTTGTCCAGAGAAGAGCTGTGTACATCACCATCCTTCAAGGGCTCTTGGAGATCTCACAGGAATTAAAAAGCACTTTTGCAGGAAGCATGGGGAGAAGAAGTGGAAGTGTGAGAAATGCTCTAAGAAATATGCTGTGCAGTCAGATTGGAAAGCACACTCCAAAACTTGTGGCACCAAAGAGTATAAATGTGACTGCGGGACTCCATTTTCAAGGAGAGATAGCTATGTAACTCACAGAGCATACTGTGTAGCATTAGCAGAAGAAACAGCAAGATTAAATGCAGCATCAACCATTGCCAACAACAGCAACAATTCAATGGCTGATAATTTCAACAACTACCATTTCCTAAAGCCCACAAACAACAACAATAATCCTCTACAATTCTTCCCTTCCTCCAACTTTTTCAAACCAGATGATCAAACTTCCCACATGTTTTTCAATAACATCAACAATGTCACTCCCACAATAGGACTCCCCTTTTGGATGGCTACAAATCCTCACCAAATCAATTTCCCTCACCCATTACTTCATCAACAAACAACAACAACAACAAATTCTGATGTTCTTTCTGTTCCTTCCTTATACAGCAATGAAGAACAACAATTTATGGGTTCATCAGCCAACATGTCAGCTACTGTGTTGCTGCAAAAGGCTGCACAAATTGGAGTGACAACCTCCACAACAGACCCATCATTGATTGAAAGTTTTGGGTTGAAATTCAGTACAGTAACTGATGGGAAAGGCTTTTTTTCAGGGATTTATGGCTCAATAATGAACTCAAACTCCAACATTATTCCTAGTTGTTGTAGCCTTGAAAATTGTGGAGATCATGAGGGCTCTGAAATATACCCTCCACCAGCAAAGAGAATGAGACACACAGTTAGTGAAGAGAGTGTTACTGGTGGAGAAGGAGAGACAAGGGATTTCTTGGGTGTGGGAATGCACACCATATGCCATCCATCACCAGTAAATGGATGGATCTGATTTCATTTGATAAGATCCATGCATATTCAGTTGAGGAAAAGCAGAAAGCTGATAGCTTTTTAAAGGAGCAGAGGAGAGCAGAGCAGTGGGGGCAAATGAGTCAAGTAAATTAAGGACCCCTTTTGGAATCAATCCATTTTATGTTATTTGTGTATTTTTCTTTCATTTTTGGTTCCTCTTTTTCTTGTGGTATCAAATGGGTATTGGGAAAAAAAAAGAAGAAGAAAAAGGGGATATTTTTATTTTATATTGAGTGAAAAGGGCATGGATTCTTTTCAGTATA 1732 39.03 MSEEQAISNPFICSIPSLGSNNNPSVVKKKRNLPGNPDPDAEVVSLSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRSNGNKEPRKRVYVCPEKSCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYKCDCGTPFSRRDSYVTHRAYCVALAEETARLNAASTIANNSNNSMADNFNNYHFLKPTNNNNNPLQFFPSSNFFKPDDQTSHMFFNNINNVTPTIGLPFWMATNPHQINFPHPLLHQQTTTTTNSDVLSVPSLYSNEEQQFMGSSANMSATVLLQKAAQIGVTTSTTDPSLIESFGLKFSTVTDGKGFFSGIYGSIMNSNSNIIPSCCSLENCGDHEGSEIYPPPAKRMRHTVSEESVTGGEGETRDFLGVGMHTICHPSPVNGWI 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 48916748 48920155 + XM_039032578.1 Bhi05g01393 35603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01393 428 PANTHER ZINC FINGER PROTEIN MAGPIE 22 421 - -
Bhi05g01393 428 Gene3D Classic Zinc Finger 53 80 - -
Bhi05g01393 428 Gene3D Classic Zinc Finger 91 183 - -
Bhi05g01393 428 Pfam Zinc finger, C2H2 type 58 79 IPR013087 -
Bhi05g01393 428 SUPERFAMILY beta-beta-alpha zinc fingers 56 155 IPR036236 -
Bhi05g01393 428 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 22 421 - -
Bhi05g01393 428 SMART c2h2final6 135 155 IPR013087 -
Bhi05g01393 428 SMART c2h2final6 57 79 IPR013087 -
Bhi05g01393 428 ProSitePatterns Zinc finger C2H2 type domain signature. 59 79 IPR013087 -
Bhi05g01393 428 ProSiteProfiles Zinc finger C2H2 type domain profile. 57 79 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01393 Bhi-Chr5:48916748 Bhi01g02709 Bhi-Chr1:67089612 2.49E-114 dispersed
Bhi10g02326 Bhi-Chr10:60367057 Bhi05g01393 Bhi-Chr5:48916748 8.73E-16 dispersed
Bhi08g00157 Bhi-Chr8:5639316 Bhi05g01393 Bhi-Chr5:48916748 1.78E-23 transposed
Bhi10g01366 Bhi-Chr10:32807749 Bhi05g01393 Bhi-Chr5:48916748 3.33E-140 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1219 PF00096 zf-C2H2 0.014 CL0361 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01393 K25870 - csv:101207997 631.328