Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01440 AAGGAATTTAGAAGCGGAAGCTTGTGCGTTACCAAACAACGGCCATAGAATATGCTCTTAGCTGTTATCAACTTTGCCGGGAACTTCATCGGACGTCTCTCAGCCGGAGCACCAATCACTGCTTCTCAACTCTAACCATTTCAATTCCTTCTCTCTATCTTCTTAAGGCGGTCTCTTCTCTCTTTCCTTCTTAATCGGAGCTTCAATTTGACTTCAATTTCTTCGTCTATTCACCGACTTCACTCGTCTTCTGCAGCTCTGATTCGCCGGCTCGAATTCCGCGGCCAAACTTGTAATTGACGGCCGTGACTGATTTCTGGCGGAATTCTGTGCTTCTACGACGAATTACTACACCTGTGTGATTTTCTAGGGCTTCAAACTTCGACGCTTTGGCTCTAAACTGGAGGTTTCAGTATACAGCTAGACGTGGCGTGGCATCCAGTTTGTGTGTCAATCGAAGTGTGGAGAATAAGAGTTCTTTAGAGCTCTCTGGCTTATGATCTAAGCTCACTTGTGCATATGGTTTCTTCAGGGGACCAGTTTGAGAATGAAGTGGATTCTGATCGATTGGAGCATGAAAACAATACAGATAGTCAACCGCAAACGTCTCAGGCCGATCCTGGTAAAACTTATGCATCAAAATCAGATCCCAAATGCACAGGGTCTGCCAGTAGTACCCATGAAGAAGCTGTCAAGCTGTCTGACGTTACAATCGAACAAGTGGATCGAGGAGAAATCTCTAATATAGTGACTGAGAAAGTGACCCATAAGCCAATTACTGCAGACCGTAACTCCCATTCTGATTTGAAAGTTTGTATTACCTCTACTATACGAGAGAAAGTATCAGAGGATGGATATAACTGGCGGAAATATGGTCAGAAATTGGTTAAGGGAAATGTCTTCGTTAGAAGCTATTATAGATGCACGCATCCTACTTGCATGGTGAAAAAACAACTGGAGCGCACTCACGATGGGAAAATCACAGACACTGTTTACTTTGGCCAGCATGATCACCCTAAGCCTCAACCTCACATTCCAGTCGCTGTTGGAGGTGTTACCGTGGTTGAAGAAAAATTTGATGAACATGCTTCTGGAAGTTCTCAAGATAAGACCTCCATTGCGCTTGGCCAGACACCTCGTCAAACTGAGCTAGCTGATATGCGTCAAACGTCATCAGTTATGGCCAATGATAATGTAAAAGACGAAGCTTCAAAAAGGTCTAGGATTAACGATGAGGTTGACAGTGATGATACACCAGACTTGAAACGAGATTTCAAAAGGAAGATAAGATGTAATATGGACGTGACAGTAGCAGACAAGTCAAGTGTTGAATCTCGGGTTGTCGTTCAAACTCCTAGCGAGGTTGACATCGTCAACGATGGATATCGCTGGCGGAAGTATGGACAGAAATTAGTGAAAGGCAATCCAAATCCTAGGAGTTACTACAGATGCTCAAGTCCTGGATGTCCAGTTAAGAAACATGTAGAGAGGGCGTCTCATGATCCGAAAGTGGTGCTTACCACGTATGAGGGTCAGCATGACCATGATATGCCCCCTGCAAGGACAGTGACGTTGAACTCAGTTGGATCCACAGCAGCCCACAGTGATGACACAAAATCGAAACCGGTGGGTAGTTCCATTGGCCACGATACGGCGTCTCGAAGCAATTCAAGCAAATTAATTGAAAAGAATGGCAAGTCGAATGTCACAGAAGCAAGTGATGGCATTGTCCTCGATATGGTGGTAAGTCCTGGCCCAGGAGTTGCGAGTGGACAAAATAAGCAGCTGAAAGTAGCAATTGAAAGCTAAGATGGCATTCCTTCCAGGTTCGAATTTGTATCATCAATCAAGACACACATTAACAGCACCAAATCATGGTATAGCACTACAGTCGGATTAACTAGTTTGTATAAATTAATTAAACTAGTAAAATAAAATTAAACGTGTAGGTTTCCATAACATTTTAATAAAAGAGAGTTGTTAAATGTTAGCTAATAATTACCAAGA 2007 43.2 MVSSGDQFENEVDSDRLEHENNTDSQPQTSQADPGKTYASKSDPKCTGSASSTHEEAVKLSDVTIEQVDRGEISNIVTEKVTHKPITADRNSHSDLKVCITSTIREKVSEDGYNWRKYGQKLVKGNVFVRSYYRCTHPTCMVKKQLERTHDGKITDTVYFGQHDHPKPQPHIPVAVGGVTVVEEKFDEHASGSSQDKTSIALGQTPRQTELADMRQTSSVMANDNVKDEASKRSRINDEVDSDDTPDLKRDFKRKIRCNMDVTVADKSSVESRVVVQTPSEVDIVNDGYRWRKYGQKLVKGNPNPRSYYRCSSPGCPVKKHVERASHDPKVVLTTYEGQHDHDMPPARTVTLNSVGSTAAHSDDTKSKPVGSSIGHDTASRSNSSKLIEKNGKSNVTEASDGIVLDMVVSPGPGVASGQNKQLKVAIES 429
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 50589624 50593462 + XM_039032044.1 Bhi05g01440 35650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01440 429 PANTHER WRKY TRANSCRIPTION FACTOR 1 1 392 - -
Bhi05g01440 429 MobiDBLite consensus disorder prediction 226 245 - -
Bhi05g01440 429 MobiDBLite consensus disorder prediction 23 58 - -
Bhi05g01440 429 MobiDBLite consensus disorder prediction 188 245 - -
Bhi05g01440 429 SUPERFAMILY WRKY DNA-binding domain 104 168 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi05g01440 429 MobiDBLite consensus disorder prediction 410 429 - -
Bhi05g01440 429 ProSiteProfiles WRKY domain profile. 104 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi05g01440 429 Gene3D WRKY domain 272 338 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi05g01440 429 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 392 IPR044810 GO:0003700
Bhi05g01440 429 MobiDBLite consensus disorder prediction 193 225 - -
Bhi05g01440 429 SMART WRKY_cls 109 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi05g01440 429 SMART WRKY_cls 285 344 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi05g01440 429 MobiDBLite consensus disorder prediction 1 58 - -
Bhi05g01440 429 SUPERFAMILY WRKY DNA-binding domain 277 345 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi05g01440 429 MobiDBLite consensus disorder prediction 354 398 - -
Bhi05g01440 429 Pfam WRKY DNA -binding domain 110 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi05g01440 429 Pfam WRKY DNA -binding domain 286 342 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi05g01440 429 ProSiteProfiles WRKY domain profile. 280 345 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi05g01440 429 Gene3D WRKY domain 94 169 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi05g01440 429 MobiDBLite consensus disorder prediction 354 401 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00875 Bhi-Chr2:18455310 Bhi05g01440 Bhi-Chr5:50589624 5.87E-11 dispersed
Bhi05g01440 Bhi-Chr5:50589624 Bhi05g01442 Bhi-Chr5:50589625 0 dispersed
Bhi05g01440 Bhi-Chr5:50589624 Bhi05g01441 Bhi-Chr5:50589624 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1221 PF03106 WRKY 2.80E-26 CL0274 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01440 K18834 - csv:101212482 684.1