Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01442 AGGAATTTAGAAGCGGAAGCTTGTGCGTTACCAAACAACGGCCATAGAATATGCTCTTAGCTGTTATCAACTTTGCCGGGAACTTCATCGGACGTCTCTCAGCCGGAGCACCAATCACTGCTTCTCAACTCTAACCATTTCAATTCCTTCTCTCTATCTTCTTAAGGCGGTCTCTTCTCTCTTTCCTTCTTAATCGGAGCTTCAATTTGACTTCAATTTCTTCGTCTATTCACCGACTTCACTCGTCTTCTGCAGCTCTGATTCGCCGGCTCGAATTCCGCGGCCAAACTTGTAATTGACGGCCGTGACTGATTTCTGGCGGAATTCTGTGCTTCTACGACGAATTACTACACCTGTGTGATTTTCTAGGGCTTCAAACTTCGACGCTTTGGCTCTAAACTGGAGGTTTCAGTATACAGCTAGACGTGGCGTGGCATCCAGTTTGTGTGTCAATCGAAGTGTGGAGAATAAGAGTTCTTTAGAGCTCTCTGGCTTATGATCTAAGCTCACTTGTGCATATGGTTTCTTCAGGGGACCAGTTTGAGAATGAAGTGGATTCTGATCGATTGGAGCATGAAAACAATACAGATAGTCAACCGCAAACGTCTCAGGCCGATCCTGGTAAAACTTATGCATCAAAATCAGATCCCAAATGCACAGGGTCTGCCAGTAGTACCCATGAAGAAGCTGTCAAGCTGTCTGACGTTACAATCGAACAAGTGGATCGAGGAGAAATCTCTAATATAGTGACTGAGAAAGTGACCCATAAGCCAATTACTGCAGACCGTAACTCCCATTCTGATTTGAAAGTTTGTATTACCTCTACTATACGAGAGAAAGTATCAGAGGATGGATATAACTGGCGGAAATATGGTCAGAAATTGGTTAAGGGAAATGTCTTCGTTAGAAGCTATTATAGATGCACGCATCCTACTTGCATGGTGAAAAAACAACTGGAGCGCACTCACGATGGGAAAATCACAGACACTGTTTACTTTGGCCAGCATGATCACCCTAAGCCTCAACCTCACATTCCAGTCGCTGTTGGAGGTGTTACCGTGGTTGAAGAAAAATTTGATGAACATGCTTCTGGAAGTTCTCAAGATAAGACCTCCATTGCGCTTGGCCAGACACCTCGTCAAACTGAGCTAGCTGATATGCGTCAAACGTCATCAGTTATGGCCAATGATAATGTAAAAGACGAAGCTTCAAAAAGGTCTAGGATTAACGATGAGGTTGACAGTGATGATACACCAGACTTGAAACGAGAGAAGATAAGATGTAATATGGACGTGACAGTAGCAGACAAGTCAAGTGTTGAATCTCGGGTTGTCGTTCAAACTCCTAGCGAGGTTGACATCGTCAACGATGGATATCGCTGGCGGAAGTATGGACAGAAATTAGTGAAAGGCAATCCAAATCCTAGGAGTTACTACAGATGCTCAAGTCCTGGATGTCCAGTTAAGAAACATGTAGAGAGGGCGTCTCATGATCCGAAAGTGGTGCTTACCACGTATGAGGGTCAGCATGACCATGATATGCCCCCTGCAAGGACAGTGACGTTGAACTCAGTTGGATCCACAGCAGCCCACAGTGATGACACAAAATCGAAACCGGTGGGTAGTTCCATTGGCCACGATACGGCGTCTCGAAGCAATTCAAGCAAATTAATTGAAAAGAATGGCAAGTCGAATGTCACAGAAGCAAGTGATGGCATTGTCCTCGATATGGTGGTAAGTCCTGGCCCAGGAGTTGCGAGTGGACAAAATAAGCAGCTGAAAGTAGCAATTGAAAGCTAAGATGGCATTCCTTCCAGGTTCGAATTTGTATCATCAATCAAGACACACATTAACAGCACCAAATCATGGTATAGCACTACAGTCGGATTAACTAGTTTGTATAAATTAATTAAACTAGTAAAATAAAATTAAACGTGTAGGTTTCCATAACATTTTAATAAAAGAGAGTTGTTAAATGTTAGCTAATAATTACCAAGA 1997 43.31 MVSSGDQFENEVDSDRLEHENNTDSQPQTSQADPGKTYASKSDPKCTGSASSTHEEAVKLSDVTIEQVDRGEISNIVTEKVTHKPITADRNSHSDLKVCITSTIREKVSEDGYNWRKYGQKLVKGNVFVRSYYRCTHPTCMVKKQLERTHDGKITDTVYFGQHDHPKPQPHIPVAVGGVTVVEEKFDEHASGSSQDKTSIALGQTPRQTELADMRQTSSVMANDNVKDEASKRSRINDEVDSDDTPDLKREKIRCNMDVTVADKSSVESRVVVQTPSEVDIVNDGYRWRKYGQKLVKGNPNPRSYYRCSSPGCPVKKHVERASHDPKVVLTTYEGQHDHDMPPARTVTLNSVGSTAAHSDDTKSKPVGSSIGHDTASRSNSSKLIEKNGKSNVTEASDGIVLDMVVSPGPGVASGQNKQLKVAIES 426
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 50589625 50593462 + XM_039032046.1 Bhi05g01442 35652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01442 426 MobiDBLite consensus disorder prediction 351 395 - -
Bhi05g01442 426 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 389 IPR044810 GO:0003700
Bhi05g01442 426 Gene3D WRKY domain 269 335 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi05g01442 426 MobiDBLite consensus disorder prediction 23 58 - -
Bhi05g01442 426 MobiDBLite consensus disorder prediction 407 426 - -
Bhi05g01442 426 MobiDBLite consensus disorder prediction 351 398 - -
Bhi05g01442 426 SUPERFAMILY WRKY DNA-binding domain 274 342 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi05g01442 426 SUPERFAMILY WRKY DNA-binding domain 104 168 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi05g01442 426 SMART WRKY_cls 282 341 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi05g01442 426 SMART WRKY_cls 109 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi05g01442 426 ProSiteProfiles WRKY domain profile. 104 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi05g01442 426 ProSiteProfiles WRKY domain profile. 277 342 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi05g01442 426 PANTHER WRKY TRANSCRIPTION FACTOR 1 1 389 - -
Bhi05g01442 426 MobiDBLite consensus disorder prediction 193 225 - -
Bhi05g01442 426 Pfam WRKY DNA -binding domain 283 339 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi05g01442 426 Pfam WRKY DNA -binding domain 110 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi05g01442 426 MobiDBLite consensus disorder prediction 1 58 - -
Bhi05g01442 426 MobiDBLite consensus disorder prediction 226 246 - -
Bhi05g01442 426 Gene3D WRKY domain 94 169 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi05g01442 426 MobiDBLite consensus disorder prediction 188 246 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01440 Bhi-Chr5:50589624 Bhi05g01442 Bhi-Chr5:50589625 0 dispersed
Bhi05g01442 Bhi-Chr5:50589625 Bhi11g00498 Bhi-Chr11:11821890 1.10E-83 dispersed
Bhi05g01441 Bhi-Chr5:50589624 Bhi05g01442 Bhi-Chr5:50589625 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1223 PF03106 WRKY 2.80E-26 CL0274 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01442 K18834 - csv:101212482 690.649