Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01445 ATGTCTCAGAATTCTAAACTCTCTTGTTCTAAGGTCAGATTACTAGCTGGTTTCAAGGTGAAGAAGGCTAAGGAGCATTTCCATGGTCAAGGGTGGAGTAACCTACTTTATCTCTTGCCATTTGGAATGATTTTGATTCTGGGTCTTTGGTATATTTTTAGTTTTTGTGATGGGAGTTCAGTTCGGGAAGTGGTGATTCCAAATACGTGTAAAGAGAAGACCTGGAACTTTCTGAAGCATTTCAATGTCAGTGAGACTCAGTTTATTGCTACGGCTTCGTTCTTCTTTCATTCAGATCAGTCATCATCTCTCCCGTGTGCGAAAGACTCAGAGCCCGGTAATGCACTGAAAGACTGCATTCCTTATGCGTTGAAGATTTTAGAACGGGAACAAGACTTGCAAAAGAAGCAAAGGTGGCTTTCTGAAGATTTACAATCTGAAGGCCAGTGCCCAATTAGGGGTGAGATGGACTCCTCCAATGTTGATCTATTGCAGTTAATGGACAACACACACTCGCTTACTTCAAAATCTTATTTTGGATTTGTGTCTCCATGTCTTCAGATTCATAGAGAGAGGATCTTGCATACTAAGGAAATTGGAAATGAGCATTCTCGAAGTGTGAATGGATTAGTAATGGGATGCTTATGGATTCTTGCTGTAGTGATATCATGCCTGAAGATGTCTGGTTTTCATTTGAAATTAAAAAACCATAAACACAAGCCAATAAAGCATCCATCGGTTGAGAATCAGCCAGTGATTCAGCTACAGCAGGTGTTGCTACAGCAGCAGTTAGATCTATCTCCAAGTCCTCCTAAGGGGGCTGGAAAATGGAGAAAGAAACTTCTTATATTATTTGTTTTGCTTGGAATTATTGGATCCTTTTGGCTCTTTTGGTATTTGAACAACAAAATCATCTTGAGGAGAGAAGAAACACTTTCTAACATGTGCGATGAGCGAGCTCGAATGTTACAGGATCAATTCAACGTTAGCATGAACCATGTTCATGCCTTGGCTATTCTGGTCTCCACTTTTCATCATGGCAAGCATCCTTCTGCCATTGATCAGAAAACATTCAGTGAATATGCAGAAAGAACAGCTTTTGAACGACCACTCACCAGTGGTGTGGCTTATGCTTTGAAAGTTACTCATTCAGAAAGAAAGCAATTTGAAGAGGAACATGGGTGGACAATTAAAAAGATGGGAACAGAGGACCAGACTCTGGTTCAGGATTCTATTCCGGAGAATTTAGACCCTGCTCCCGTTCAGGATGAATATGCACCTGTGATATTTTCACAAGAAACTGTATCTCATATAGTTTCCATTGACATGATGTCTGGAAAGGAAGACCGTGAAAACATCTTGCGAGCAAGAGCTTCAGGGAAGGGAGTGCTGACATCTCCTTTCAAGCTTCTTAAGTCCAATCACCTAGGTGTTGTACTCACTTTTGCTGTCTATAACACCGACCTTCCTCCTGATGCAACACCAGAGCAACGTATTAAAGCTACTGTTGGGTATCTAGGAGCATCCTATGATGTCCCATCACTTGTGGACAAGCTTCTCCACCAACTTTCCAGCAAACAATCAATCGTTGTTGATGTTTATGACACAACTAATGCAACTGCTCCCATTAAGATGTATGGATCTGATGTAATAGATACTGGTCTATTGCACATTAGCAACCTGGATTTTGGAGATCCCCAAAGGAAGCATGAGATGCATTGCAGATTTAAGCAGAAGCCACAATTACCATGGATGGCCATAAATGCATCAGTGGGAGTTCTGGTTATTACTTTACTCGTTGGCCATATATTTTATGCGGCCATAAGTCGAATCGCAAAAGTTGAAAATGACTATCATGAGATGATGGGACTCAAAAGTCGTGCTGAAGCTGCAGATGTGGCAAAGTCTCAGTTTCTTGCAACTGTTTCTCACGAGATCAGGACGCCAATGAATGGTGTTTTAGGGATGCTGAAAATGCTGATGGACACTGATCTTGACCCAAACCAACTGGACTATGCCCAGACTGCATATGATAGTGGGAAAGAATTAATATCACTAATAAACGAGGTTCTCGACCAAGCTAAAATAGAATCAGGCAGGCTTGAACTTGAAGATGTACCGTTTGATCCACGAGCTTTACTAGATAATGTGCTGTCAATGTTCTCTGGAAAATGTCATGAGAAGGGAATAGAGTTAGCTGTTTATGTCTCTAATTTGGTCCCTGAAGTTCTCATCGGTGACCCTGGACGCTTCCGACAGATAATTACCAATCTTGTGGGAAATTCAATCAAGTTCACCAACGACAAAGGACACATATTTGTTACTGTACACCTGGCAGAAGAAGTGAGGACTCCCTTGGAGGCAATGGACAGTGTGCTAAGACAAGGCCTAGACTTAGTGAAAGAGACGCGGGGAAAAAGTCACAATACGTTAAGCGGGTTTCCAGTGGTCGAGAGGTGCAAGAGTTGGGAGTCTTTCAAGATATTTAGAAGAATAGATATGATGAAAGAAGATGACGACGTAATTAAGTTGCTTGTATCAGTTGAGGATACAGGTCATGGAGTTCCTTTAGAAGCACAAAGTCGAATTTTTATGCCATTTATGCAAGCGGATAGTTCCACTTCACGCAAGTATGGTGGGACTGGAATAGGTCTGAGCATCAGCAAATGTCTGGTGGATCTAATGGGTGGGGAGATAGGTTTTGTGAGCCAACCTGGTGTTGGCAGCACATTTTCATTTACTGGATGTTTGAGAAAAGGCGATACGAAGTCCCTTGATACAAAGTGGCAGCAGAATGATTCAGCTGTGTTAGATTTCCGAGGATTGCGAGCGCTGGTACTGGATAATAGAAGCATTAGAGCCGAGGTAACAAAATATCATCTTAAGAGGTTAGAGATCTCGGTGGATATAGTTTCAAGTTTGGCTTCAGCACATGAATACTTAACCAATAATTGCATCAAAAGTCCATCCAAGCCTTTGGCCATGGTGCTTGTCGACAAAGATGTATGGGATAAGGAAACTGGTCCGACAATCCCCCATATGTTTAAACGACATGGGGTAAATGGCAAGGAAGAATCAAGAGGAAGTCCTAAGATCTTTCTCTTAGCCACCTCCATTAGCCCTCAAGAGAGGAGAGCTCTCAAGTTGACCGGTTATGTTGATAATGTAATGACAAAACCCCTTAGGTCAGGTGTCCTGATTGGATGCTTCCAGGAAGCCTTCGGGAAGGTCAACCGAAAGAAACCGTCTATTCTTGGGAACTTACTGAGAGAAAAGCAAATATTGGTGGTCGATGACAATGCAGTCAATAGACGAGTTGCCGAAGGTGCTCTAAAGAAATATGGAGCAAAGGTTACCTGTGTGGAAAGTGGTAGTGCTGCTATTTCATTGTTAAAACCACCACACAAGTTCAATGCTTGCTTCATGGATCTTCAGATGCCTGAGATGGATGGGTTTGAAGCAACACGCCAGATACGAAATGTCGAAAATAAGGTTAATGAGGACATTTCTTCTGGAAAAGTATCAATTGAGATGTTTGGGAATGTGGCTCATTGGCATACACCAGTATTGGCCATGACAGCTGATGTGATTCAGGCTACAAATGAAGCATGCATGAACTGTGGGATGGATGGTTATGTAGCAAAGCCTTTTGAAGAAGAAAAATTATATTCAGCGGTTGCTCGTTTCTTTGAGTCCGATGCTCGAGTAGAACATGAATAGAATGATCATTCTGATTTTAGTGATCCATTCAAGGCATATATGGATCGAGATTGACTCTAATAATGAGTTTTCTTCGGATGAAAGGCCCTACCAGGACAAGGCATTGGGTAGAATCGTTTGGAATACGTCCCAATCTTTACAGTTGGTGACGATGGGATAGATATGAATGGAGGATATCTGTCATAAGGGGTCATTGGTATACCGACACTAACCAGCGAGGACTATTCCTGAAGGATAGCAGTTTGATTGAGTCGCTTCATCCACATGGTTCATCTTGCAAAGTTGTCAGCCATTTGCACTTCTAGTGTGAAGGTAGATGCACCATTCATCAACACCCAAGAATACGCTCGACATCTCAGCTGCAAGATTGGATGATCAAGTTGAAACAAAATTCTGTTTTAGTGCAGGAGTGCAACGATCATTCGAATGATGCAGCTTGTCATTTTGACAGAAACATGACATTCCTAGTGATGCTCAAGATAAAAGAAACAAGGGAATGAAGAATCCACAAAATCAAATCGCGAATTCTCAGCTCAAAATGTAGTGGGTGGAATTCTTCAACCTAACTTCAATAGAATTCTTCAACTGAACTTTGATCTGATTTCCTACATGGAACGAAGCCACGACAAACAAGGTGTACCAATTAGAAGATTGGCTGACATTCCAAACAAGAACAGCTTCTTAGGTTTCATGGAGTCCCTGATTCGTCCCGGTTCCATCGGGCAGTTGGTTTTGCTGTTTTTCAGGCAAATGAATAGCTGCTTTAATTAATCACCAACTCTTCTTATTACTATGATGTTCCAATCAAAATTGTGGTGGTGATTCTCATCCTACCAATACTTCTGTGCATAAGGCAACTCAGACAAGTCTGAGACTCTGAACCAACCCCTCAATATGATTCTCAAGATTCATGGTCGAAATAAGAATAAGATAAATAACTTGTAATTTAGAAATTAGAACAAGGGAGAATTGGCTTGTACAGGCTGAATTTCAAATTCTTTGCACCATCTTAGATA 4736 41.53 MSQNSKLSCSKVRLLAGFKVKKAKEHFHGQGWSNLLYLLPFGMILILGLWYIFSFCDGSSVREVVIPNTCKEKTWNFLKHFNVSETQFIATASFFFHSDQSSSLPCAKDSEPGNALKDCIPYALKILEREQDLQKKQRWLSEDLQSEGQCPIRGEMDSSNVDLLQLMDNTHSLTSKSYFGFVSPCLQIHRERILHTKEIGNEHSRSVNGLVMGCLWILAVVISCLKMSGFHLKLKNHKHKPIKHPSVENQPVIQLQQVLLQQQLDLSPSPPKGAGKWRKKLLILFVLLGIIGSFWLFWYLNNKIILRREETLSNMCDERARMLQDQFNVSMNHVHALAILVSTFHHGKHPSAIDQKTFSEYAERTAFERPLTSGVAYALKVTHSERKQFEEEHGWTIKKMGTEDQTLVQDSIPENLDPAPVQDEYAPVIFSQETVSHIVSIDMMSGKEDRENILRARASGKGVLTSPFKLLKSNHLGVVLTFAVYNTDLPPDATPEQRIKATVGYLGASYDVPSLVDKLLHQLSSKQSIVVDVYDTTNATAPIKMYGSDVIDTGLLHISNLDFGDPQRKHEMHCRFKQKPQLPWMAINASVGVLVITLLVGHIFYAAISRIAKVENDYHEMMGLKSRAEAADVAKSQFLATVSHEIRTPMNGVLGMLKMLMDTDLDPNQLDYAQTAYDSGKELISLINEVLDQAKIESGRLELEDVPFDPRALLDNVLSMFSGKCHEKGIELAVYVSNLVPEVLIGDPGRFRQIITNLVGNSIKFTNDKGHIFVTVHLAEEVRTPLEAMDSVLRQGLDLVKETRGKSHNTLSGFPVVERCKSWESFKIFRRIDMMKEDDDVIKLLVSVEDTGHGVPLEAQSRIFMPFMQADSSTSRKYGGTGIGLSISKCLVDLMGGEIGFVSQPGVGSTFSFTGCLRKGDTKSLDTKWQQNDSAVLDFRGLRALVLDNRSIRAEVTKYHLKRLEISVDIVSSLASAHEYLTNNCIKSPSKPLAMVLVDKDVWDKETGPTIPHMFKRHGVNGKEESRGSPKIFLLATSISPQERRALKLTGYVDNVMTKPLRSGVLIGCFQEAFGKVNRKKPSILGNLLREKQILVVDDNAVNRRVAEGALKKYGAKVTCVESGSAAISLLKPPHKFNACFMDLQMPEMDGFEATRQIRNVENKVNEDISSGKVSIEMFGNVAHWHTPVLAMTADVIQATNEACMNCGMDGYVAKPFEEEKLYSAVARFFESDARVEHE 1239
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 50593765 50604329 - XM_039032043.1 Bhi05g01445 35655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01445 1239 SMART HisKA_10 634 699 IPR003661 GO:0000155|GO:0007165
Bhi05g01445 1239 SUPERFAMILY CheY-like 938 1074 IPR011006 -
Bhi05g01445 1239 PANTHER TWO-COMPONENT HISTIDINE KINASE 268 1232 - -
Bhi05g01445 1239 SMART HKATPase_4 746 919 IPR003594 -
Bhi05g01445 1239 CDD HATPase_EvgS-ArcB-TorS-like 751 917 - -
Bhi05g01445 1239 SUPERFAMILY CheY-like 1090 1230 IPR011006 -
Bhi05g01445 1239 Gene3D - 1087 1236 - -
Bhi05g01445 1239 Gene3D - 698 919 IPR036890 -
Bhi05g01445 1239 Gene3D CHASE domain 353 580 IPR042240 -
Bhi05g01445 1239 PRINTS Bacterial sensor protein C-terminal signature 844 858 IPR004358 GO:0016310|GO:0016772
Bhi05g01445 1239 PRINTS Bacterial sensor protein C-terminal signature 862 872 IPR004358 GO:0016310|GO:0016772
Bhi05g01445 1239 PRINTS Bacterial sensor protein C-terminal signature 879 897 IPR004358 GO:0016310|GO:0016772
Bhi05g01445 1239 PRINTS Bacterial sensor protein C-terminal signature 903 916 IPR004358 GO:0016310|GO:0016772
Bhi05g01445 1239 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 620 700 IPR036097 GO:0000155|GO:0007165
Bhi05g01445 1239 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 688 914 IPR036890 -
Bhi05g01445 1239 CDD HisKA 634 695 IPR003661 GO:0000155|GO:0007165
Bhi05g01445 1239 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 746 914 IPR003594 -
Bhi05g01445 1239 SMART REC_2 1092 1226 IPR001789 GO:0000160
Bhi05g01445 1239 Pfam Response regulator receiver domain 1094 1226 IPR001789 GO:0000160
Bhi05g01445 1239 CDD REC_hyHK_CKI1_RcsC-like 1094 1226 - -
Bhi05g01445 1239 SMART CHASE_2 349 548 IPR006189 -
Bhi05g01445 1239 Pfam CHASE domain 352 546 IPR006189 -
Bhi05g01445 1239 ProSiteProfiles Response regulatory domain profile. 943 1074 IPR001789 GO:0000160
Bhi05g01445 1239 Gene3D - 300 352 - -
Bhi05g01445 1239 ProSiteProfiles CHASE domain profile. 349 573 IPR006189 -
Bhi05g01445 1239 ProSiteProfiles Response regulatory domain profile. 1093 1230 IPR001789 GO:0000160
Bhi05g01445 1239 PANTHER HISTIDINE KINASE 2 268 1232 - -
Bhi05g01445 1239 Pfam His Kinase A (phospho-acceptor) domain 634 699 IPR003661 GO:0000155|GO:0007165
Bhi05g01445 1239 Gene3D - 606 697 - -
Bhi05g01445 1239 ProSiteProfiles Histidine kinase domain profile. 641 919 IPR005467 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01443 Bhi-Chr5:50593765 Bhi05g01445 Bhi-Chr5:50593765 0 dispersed
Bhi05g01445 Bhi-Chr5:50593765 Bhi10g01319 Bhi-Chr10:31667577 0 dispersed
Bhi05g01444 Bhi-Chr5:50593765 Bhi05g01445 Bhi-Chr5:50593765 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1226 PF03924 CHASE 6.30E-36 CL0165 Bhi TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01445 K14489 - tcc:18612437 1568.9