Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01499 CGATCGCCTATATAAATGGCCGAAAGGACACTGAATTGGCCGAATCAAGATGAGCTGATCAGCAATCTTTACCATCTAAACAATTCCACTACTTTTCTTGAGTTTTCCCCCTTTTTCGATACTACTCTCTCTGTTTCTCCTCTGTTCTCGAGGATCGAAGTTGTTTTTCCGGCTATACCGACCGAGTTCGTGAAGTTCGTTTTAACTACAATGGGTCTCTCCAGTCTTCCAGCTCCATCTGAAGGAGTTCTGAATGTGATTCTTGTAAACACTGCACTGTCCATTTCCATGTTCAAATGCATTGTTCGTTTGATCCTTCACATGATAGGAATCCGTCTCTCATGGCCATCATCCTTAGTCTCATCAACAGATTCCTTTGAAAGTTCCTCAGAGTTGGGAGATTCCAATTTTGGCTCCTCTTGGAGTTACCTCGAGATGTTTCGGAACCGATATCTGAGTATTAGATTTGATAAAATACAGGGTTCAGAACGTCGTGAACATGACTGCTCGGTCTGCCTAACTCAATTTGAACCTGAATCTGAGATAAATATCTTATCTTGTGGTCATCTTTTTCACACAGAATGCTTGGAGAAGTGGCTGGACTACTGGAACATCACATGCCCTCTTTGCAGAACTCCTCTAATGTCTGAAGAAGAGAAATCGTGCTTTTGGTGAGCATTTAGTATGCTAGAATATAGTTAGGAGAAACTCATGTACAGCATACTCTTAAAGATAATCGTGAATGCGTTTCCTACCTTCGTCGTGTATGACGTTTGAAGTTTGATGTGTCAGACTGGTCTTTTGAGACCAAAGTTTTGTCCCTGTAAATACATGTGTATTTCTATGCTTCTGGCTTGTGCCTTTAGCTTTGAGTTAATCCACTGTTCACTTCTTTGTATATGGAATTGACGAGTATGCAAAAAAGTTTTTCA 932 40.77 MAERTLNWPNQDELISNLYHLNNSTTFLEFSPFFDTTLSVSPLFSRIEVVFPAIPTEFVKFVLTTMGLSSLPAPSEGVLNVILVNTALSISMFKCIVRLILHMIGIRLSWPSSLVSSTDSFESSSELGDSNFGSSWSYLEMFRNRYLSIRFDKIQGSERREHDCSVCLTQFEPESEINILSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 51336181 51337857 - XM_039031602.1 Bhi05g01499 35709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01499 219 Pfam Ring finger domain 163 206 IPR001841 -
Bhi05g01499 219 SUPERFAMILY RING/U-box 158 210 - -
Bhi05g01499 219 ProSiteProfiles Zinc finger RING-type profile. 164 206 IPR001841 -
Bhi05g01499 219 SMART ring_2 164 205 IPR001841 -
Bhi05g01499 219 PANTHER - 66 219 IPR044249 -
Bhi05g01499 219 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 137 211 IPR013083 -
Bhi05g01499 219 PANTHER E3 UBIQUITIN-PROTEIN LIGASE XERICO-RELATED 66 219 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi05g01499 Bhi10g01292 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01499 Bhi-Chr5:51336181 Bhi05g01501 Bhi-Chr5:51336181 2.70E-111 dispersed
Bhi05g01499 Bhi-Chr5:51336181 Bhi05g01500 Bhi-Chr5:51336181 2.70E-111 tandem
Bhi05g00649 Bhi-Chr5:18862331 Bhi05g01499 Bhi-Chr5:51336181 2.71E-06 transposed
Bhi10g01292 Bhi-Chr10:30600945 Bhi05g01499 Bhi-Chr5:51336181 1.24E-63 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01499 K16285 - csv:101215843 278.87