Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01500 GAAAGGACACTGAATTGGCCGAATCAAGATGAGCTGATCAGCAATCTTTACCATCTAAACAATTCCACTACTTTTCTTGAGTTTTCCCCCTTTTTCGATACTACTCTCTCTGTTTCTCCTCTGTTCTCGAGGATCGAAGCTCTGATGTGAAGAAAGGCTTACTTGCAAGTTGCAACCTCTTAATCATTGTGTATTTCTGATCAATCTGCTAGTTGTTTTTCCGGCTATACCGACCGAGTTCGTGAAGTTCGTTTTAACTACAATGGGTCTCTCCAGTCTTCCAGCTCCATCTGAAGGAGTTCTGAATGTGATTCTTGTAAACACTGCACTGTCCATTTCCATGTTCAAATGCATTGTTCGTTTGATCCTTCACATGATAGGAATCCGTCTCTCATGGCCATCATCCTTAGTCTCATCAACAGATTCCTTTGAAAGTTCCTCAGAGTTGGGAGATTCCAATTTTGGCTCCTCTTGGAGTTACCTCGAGATGTTTCGGAACCGATATCTGAGTATTAGATTTGATAAAATACAGGGTTCAGAACGTCGTGAACATGACTGCTCGGTCTGCCTAACTCAATTTGAACCTGAATCTGAGATAAATATCTTATCTTGTGGTCATCTTTTTCACACAGAATGCTTGGAGAAGTGGCTGGACTACTGGAACATCACATGCCCTCTTTGCAGAACTCCTCTAATGTCTGAAGAAGAGAAATCGTGCTTTTGGTGAGCATTTAGTATGCTAGAATATAGTTAGGAGAAACTCATGTACAGCATACTCTTAAAGATAATCGTGAATGCGTTTCCTACCTTCGTCGTGTATGACGTTTGAAGTTTGATGTGTCAGACTGGTCTTTTGAGACCAAAGTTTTGTCCCTGTAAATACATGTGTATTTCTATGCTTCTGGCTTGTGCCTTTAGCTTTGAGTTAATCCACTGTTCACTTCTTTGTATATGGAATTGACGAGTATGCAAAAAAGTTTTTCA 984 40.45 MGLSSLPAPSEGVLNVILVNTALSISMFKCIVRLILHMIGIRLSWPSSLVSSTDSFESSSELGDSNFGSSWSYLEMFRNRYLSIRFDKIQGSERREHDCSVCLTQFEPESEINILSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW 154
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 51336181 51337836 - XM_039031604.1 Bhi05g01500 35710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01500 154 SUPERFAMILY RING/U-box 93 145 - -
Bhi05g01500 154 ProSiteProfiles Zinc finger RING-type profile. 99 141 IPR001841 -
Bhi05g01500 154 PANTHER - 1 154 IPR044249 -
Bhi05g01500 154 Pfam Ring finger domain 98 141 IPR001841 -
Bhi05g01500 154 SMART ring_2 99 140 IPR001841 -
Bhi05g01500 154 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 146 IPR013083 -
Bhi05g01500 154 PANTHER E3 UBIQUITIN-PROTEIN LIGASE XERICO-RELATED 1 154 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01500 Bhi-Chr5:51336181 Bhi05g01502 Bhi-Chr5:51336181 2.26E-111 dispersed
Bhi05g01499 Bhi-Chr5:51336181 Bhi05g01500 Bhi-Chr5:51336181 2.70E-111 tandem
Bhi05g01500 Bhi-Chr5:51336181 Bhi05g01501 Bhi-Chr5:51336181 2.26E-111 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01500 K16285 - csv:101215843 278.87