Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01505 TCATTATCATCTAAAAAAAGAAACCTTTTTTATTTTTTTTATTTTTAATTGGGCTAAGTCATTTTTCTCCTTCTCACACATGCTCACATCCATCCCATATCCTTCTCTTCTTCCTCTATCCATCTAAAAGAAGGGAAAGAAAAAAAAACCCAGAATCAGATTGTGAGAGTTCTAAAAAGTTTCCAGCTTTTTTGTGTTTCTCTTGCAGTAATCATTAATTTTGTTGTAATTTGAAGACCCCTTTTACCGATCTCTGTTTGTATGTTCTGGATGCTAAGTCTATTTATTGTCGCCATGGTCCTCATGGGTCAGAATTGATTGTTCACGAAAGTTCTCTTCTCTTCCTCTTTATTCTCGTGCCGAGTATGAATTTGTGTTAGTTTCTTGAAGCTGGGGCCATGGTTAGTGGCCATACATTCCATTTAAAGAAGCTGCATTTAGCTTGTTCATATAGTTGATTCTAGTTTTGGCAATCTAGAAGGATTTCTAAGGGAACGTTTCAAGGATCTGATTGCAGTATGGGTTACATATGTGATTTCTGTGGGCAACAAAGGTCGATTGTGTACTGCCGATCTGATGCTGCAGCTTTGTGCTTATCTTGTGACCGAAATGTTCACTCTGCTAATGCCTTGTCAAGGCGCCACTCAAGAACATTGTTATGTGATCGATGCCATTCACAAGCAGCATTTGTTAGATGTCCTGAAGAGAATATTTCACTTTGTCAAAATTGTGACTATATGGGGCATAGCTCATCTGCCTCCATTTCATCTCGAAAGAGGCAACCAATCAATTGCTACTCAGGCTGCCCGACGGCTGCAGAGCTCTCATCTATTTGGTCATTTGTTCTAGATCTCACTTCTGGAAGTGATGCTTGTGAGCAAGAATTAGGATTGATGAGCATTGCCGAAAATAGTGCAGTAAATGCTTGGGGCCCTGATGATAAAGCTGGTCAAAACGGATCTGGTGTAGATGAAAGCCATGAATTCGCAAGTGAAGATAAATCAATTTGGTATGGGTCATCTTCAATGCCTCACATTATGGACCAACCAATTACTAGGGATGCAACTTCACCCAAGTTGCACTATCCTGGAACAAAAGGTCCTGAACTTGACATTGAAGATGACCTCTACGAGACTTTGAATATGGATGAAGATAGTTTGAATATTGAAAATTATGAAGAACTATTTGGTGTATCTCTCAGTTATTCTGAAGAACTGCTGGAGAATGGTGGTATTGATAGTTTGTTCAGGATGAAAAACTTATCTGCTGCTAAATCTGGTTGCCCTGGCGCAGCTCCTGCAGAGGGGGTGTCAGGCGGTTTTGTTAACAATACGATGCAGCCTCCAAGCAGTAATGCAGCATCGGCAGATTCCGTAATGAGCACAAAGACTGAACCGGTCCTTTGTTATAACAATAAGCAAGAGCACTCCAGTTTATCGTTTTCTGGCATGACTGGAGAGAGTAGTGCAGGAGATCATCCAGACTGTGGAGCTTCATCAATGCTTCTAATGGGAGAGCCTCCATGGTGTTCCATGAGCACTGAGAGTTCCTTCCAGTCATCTAATCGCAGTGATGCTGTAATGCGCTATAAGGAAAAGAAGAAAGCTCGAAAGTTTGAAAAGAAGGTGAGGTATGCCTCTCGCAAAGTTAGGGCTGATACTCGAAGACGTGTCAAGGGGCGCTTTGTCAAAGCTGGAGAAGCTTATGACTATGATCCATTGAATCAAACCAGAAGCTACTGAAAGTTCAACTTTTGGAATGAACATGAAAAAGGAAAAAAAAAGAGAAAAAAAAAAAGGATATGTGGCTTAAGGGTCCAACATTGTACTCCAATCGATGGATAAATATTGATATCTCAGTGTTGGACGGGAAGTATAGACGTATACAAACAAACCTGAGTTTCATCAGGTAGATGTACAAAAGCCGGGTCTAATAGCTCTATCGATACAACTCGTGGGGCCAAAAAATCTGTATCCATACCACCTAAAACTAACAAAAATATTGGCATCCAAGACAATGTACATTTCGGGGCTCTAAGTGATGGGTATAGTTTTCTTGGTTAATCAATGCAGCTTCAGCTCGTTTGCTATGTACTTAAAAGTTTGAAAAAAAAAAAAAAAAATACTGATCTGATCATTGGCTGGCAATGGCTGTGTTCACAATATGGAGGTCACCTCTTCCTCCTTGCTTTTGGCTACTTGACAAACATGGCTGCACCAAATTCACAGTTTCCAGGTAATCTTGATTCCCTTTTCAACTGACTTGTAAATTTGATAATCTGTTTATTTGCTGAGGTAGAAACATGCAGCCAGAACAATTATATTTGGGACAAAACTGAACTGTTGTAAGTTAAAATTTCCTTAATGGCACACAATGAATGTATATGTTGCAAAGATTGGTATTAGTATTTAACCAATTTTGTAGTCCA 2428 39.7 MGYICDFCGQQRSIVYCRSDAAALCLSCDRNVHSANALSRRHSRTLLCDRCHSQAAFVRCPEENISLCQNCDYMGHSSSASISSRKRQPINCYSGCPTAAELSSIWSFVLDLTSGSDACEQELGLMSIAENSAVNAWGPDDKAGQNGSGVDESHEFASEDKSIWYGSSSMPHIMDQPITRDATSPKLHYPGTKGPELDIEDDLYETLNMDEDSLNIENYEELFGVSLSYSEELLENGGIDSLFRMKNLSAAKSGCPGAAPAEGVSGGFVNNTMQPPSSNAASADSVMSTKTEPVLCYNNKQEHSSLSFSGMTGESSAGDHPDCGASSMLLMGEPPWCSMSTESSFQSSNRSDAVMRYKEKKKARKFEKKVRYASRKVRADTRRRVKGRFVKAGEAYDYDPLNQTRSY 407
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 51442402 51447792 - XM_039031931.1 Bhi05g01505 35715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01505 407 CDD Bbox1_BBX-like 4 47 - -
Bhi05g01505 407 ProSiteProfiles CCT domain profile. 350 392 IPR010402 GO:0005515
Bhi05g01505 407 Pfam CCT motif 350 392 IPR010402 GO:0005515
Bhi05g01505 407 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 407 - -
Bhi05g01505 407 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bhi05g01505 407 ProSiteProfiles Zinc finger B-box type profile. 43 90 IPR000315 GO:0008270
Bhi05g01505 407 SMART bboxneu5 4 47 IPR000315 GO:0008270
Bhi05g01505 407 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 9-LIKE 1 407 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi05g01505 Bhi10g01288 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01505 Bhi-Chr5:51442402 Bhi05g01507 Bhi-Chr5:51443076 0 dispersed
Bhi08g01898 Bhi-Chr8:54370487 Bhi05g01505 Bhi-Chr5:51442402 8.96E-11 dispersed
Bhi09g01975 Bhi-Chr9:55135582 Bhi05g01505 Bhi-Chr5:51442402 3.36E-10 dispersed
Bhi10g01473 Bhi-Chr10:35166670 Bhi05g01505 Bhi-Chr5:51442402 3.61E-66 dispersed
Bhi05g01505 Bhi-Chr5:51442402 Bhi05g01506 Bhi-Chr5:51443076 0 tandem
Bhi10g01287 Bhi-Chr10:30472702 Bhi05g01505 Bhi-Chr5:51442402 1.52E-176 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1232 PF06203 CCT 2.70E-16 CL0281 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01505 - - csv:101216326 767.689