Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01506 TTTTCATTATCATCTAAAAAAAGAAACCTTTTTTATTTTTTTTATTTTTAATTGGGCTAAGTCATTTTTCTCCTTCTCACACATGCTCACATCCATCCCATATCCTTCTCTTCTTCCTCTATCCATCTAAAAGAAGGGAAAGAAAAAAAAACCCAGAATCAGATTGTGAGAGTTCTAAAAAGTTTCCAGCTTTTTTGTGTTTCTCTTGCAGTAATCATTAATTTTGTTGTAATTTGAAGACCCCTTTTACCGATCTCTGTTTGTATGTTCTGAAGCTGCATTTAGCTTGTTCATATAGTTGATTCTAGTTTTGGCAATCTAGAAGGATTTCTAAGGGAACGTTTCAAGGATCTGATTGCAGTATGGGTTACATATGTGATTTCTGTGGGCAACAAAGGTCGATTGTGTACTGCCGATCTGATGCTGCAGCTTTGTGCTTATCTTGTGACCGAAATGTTCACTCTGCTAATGCCTTGTCAAGGCGCCACTCAAGAACATTGTTATGTGATCGATGCCATTCACAAGCAGCATTTGTTAGATGTCCTGAAGAGAATATTTCACTTTGTCAAAATTGTGACTATATGGGGCATAGCTCATCTGCCTCCATTTCATCTCGAAAGAGGCAACCAATCAATTGCTACTCAGGCTGCCCGACGGCTGCAGAGCTCTCATCTATTTGGTCATTTGTTCTAGATCTCACTTCTGGAAGTGATGCTTGTGAGCAAGAATTAGGATTGATGAGCATTGCCGAAAATAGTGCAGTAAATGCTTGGGGCCCTGATGATAAAGCTGGTCAAAACGGATCTGGTGTAGATGAAAGCCATGAATTCGCAAGTGAAGATAAATCAATTTGGTATGGGTCATCTTCAATGCCTCACATTATGGACCAACCAATTACTAGGGATGCAACTTCACCCAAGTTGCACTATCCTGGAACAAAAGGTCCTGAACTTGACATTGAAGATGACCTCTACGAGACTTTGAATATGGATGAAGATAGTTTGAATATTGAAAATTATGAAGAACTATTTGGTGTATCTCTCAGTTATTCTGAAGAACTGCTGGAGAATGGTGGTATTGATAGTTTGTTCAGGATGAAAAACTTATCTGCTGCTAAATCTGGTTGCCCTGGCGCAGCTCCTGCAGAGGGGGTGTCAGGCGGTTTTGTTAACAATACGATGCAGCCTCCAAGCAGTAATGCAGCATCGGCAGATTCCGTAATGAGCACAAAGACTGAACCGGTCCTTTGTTATAACAATAAGCAAGAGCACTCCAGTTTATCGTTTTCTGGCATGACTGGAGAGAGTAGTGCAGGAGATCATCCAGACTGTGGAGCTTCATCAATGCTTCTAATGGGAGAGCCTCCATGGTGTTCCATGAGCACTGAGAGTTCCTTCCAGTCATCTAATCGCAGTGATGCTGTAATGCGCTATAAGGAAAAGAAGAAAGCTCGAAAGTTTGAAAAGAAGGTGAGGTATGCCTCTCGCAAAGTTAGGGCTGATACTCGAAGACGTGTCAAGGGGCGCTTTGTCAAAGCTGGAGAAGCTTATGACTATGATCCATTGAATCAAACCAGAAGCTACTGAAAGTTCAACTTT 1598 41.05 MGYICDFCGQQRSIVYCRSDAAALCLSCDRNVHSANALSRRHSRTLLCDRCHSQAAFVRCPEENISLCQNCDYMGHSSSASISSRKRQPINCYSGCPTAAELSSIWSFVLDLTSGSDACEQELGLMSIAENSAVNAWGPDDKAGQNGSGVDESHEFASEDKSIWYGSSSMPHIMDQPITRDATSPKLHYPGTKGPELDIEDDLYETLNMDEDSLNIENYEELFGVSLSYSEELLENGGIDSLFRMKNLSAAKSGCPGAAPAEGVSGGFVNNTMQPPSSNAASADSVMSTKTEPVLCYNNKQEHSSLSFSGMTGESSAGDHPDCGASSMLLMGEPPWCSMSTESSFQSSNRSDAVMRYKEKKKARKFEKKVRYASRKVRADTRRRVKGRFVKAGEAYDYDPLNQTRSY 407
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 51443076 51447795 - XM_039031932.1 Bhi05g01506 35716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01506 407 CDD Bbox1_BBX-like 4 47 - -
Bhi05g01506 407 ProSiteProfiles CCT domain profile. 350 392 IPR010402 GO:0005515
Bhi05g01506 407 Pfam CCT motif 350 392 IPR010402 GO:0005515
Bhi05g01506 407 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 407 - -
Bhi05g01506 407 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bhi05g01506 407 ProSiteProfiles Zinc finger B-box type profile. 43 90 IPR000315 GO:0008270
Bhi05g01506 407 SMART bboxneu5 4 47 IPR000315 GO:0008270
Bhi05g01506 407 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 9-LIKE 1 407 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01506 Bhi-Chr5:51443076 Bhi05g01508 Bhi-Chr5:51443076 0 dispersed
Bhi05g01505 Bhi-Chr5:51442402 Bhi05g01506 Bhi-Chr5:51443076 0 tandem
Bhi05g01506 Bhi-Chr5:51443076 Bhi05g01507 Bhi-Chr5:51443076 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1233 PF06203 CCT 2.70E-16 CL0281 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01506 - - csv:101216326 767.689