Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01529 ATAAAACAGAGAAAATAAGAAGTAAAATGCGAAAGGATAGAAGAAGTAGCGAGGCGGTGGCCGTCTAAAGCTCAGTCGCCGCCGCTGCCGTCGAAGTCTCCACCTCAGTCTCCGCCTCCGTTGGATGCGCCGCCGTCTGAAGCTCCGTGTTCGCCGTTCGCCACAACCCTCGTTCACTGAGGAGAATGGCGCGCGAGGGGGAAGAAGAATCGCTGCACATATTCACTGTTAGGGTTTTTCAAAATACTAAAGGGCAGTTTGGACTTTTCATATACTCATTTGTCCCAGACAAGACTCATCATTTTGAAAAAGCATCTAAAAAGTCTTACCCAAAAAAAAAAAAAAGAAGAAAAATCCTATTTTTCCCAATTTCCCAACGTTCGACCATTTTCTTTTCATGGATCAATGTTGTTTGGCCACTGAGAAGATAGCTCCAAAATTTCCCGGAAAATGAGAGAACTCCGAATTTGCACTTTCCCTTGTTTATCTTTATGTTAGACAGCGATAGGCCATCTGAAGCTTCATGGAGTCTGGAATTTGCCATTGCCATATCATAATTCTAGGGCCCTGTTTCACTTTCATGCGGTCTTCTTTGGAGCAGATATTTCTGTTCATCAATGAAAAAGATGAACCGGACAAATTTCATTCTTCGGTTTCTTCAAGGACCAGAGACGGATAAGAATGAAGTAGCCAAAATAAGAGATGCAATCAGAAAGGGAAGTAGCTACTGTGGCAAGCTCTTGAACTACAAGAAGAATGGTACTCCTTTCTGGAATCTTCTCACAGTTGGGCCTGTCAAAGACTCCCATGGAAACATCATCAAATTTATTGGAATGCAGGTTGAGATCCCAAAAAACACAGAAGGTATGAAGAAGTCATCATATTCAAATAAAACAGTACTTGATGAAAAAGAGAAAACCATGAGGTCCACGTCCATTATAGAAGTCCAAGCTGAGAGGGAAATTAGGTCCATTGTAGAGGTCCAAGCTGTGAAAAGTCTAAGATCTCATATTCAGTCAAAAAGGCATGATGCTGATACAAAAAACGAAGAGCCAGAAACGACTGATGTTGACTATGCTCTGTACAAGGCTCTGGATGATGAGAATATCAGCACAGCTGATAACCAAAAGGCTTGGTTCAAAGAAAGGACTCTAGGTTCTGCAGTAGAATGTGAAGAAGAGACAGTGGTTGAGACATCTGTTTTCAAGCCTAGGAATGGTGATCACGTTGCTAAAAGAGAAAGGGACACACGTCAAGGAATTGAGTTGGCTACTACATTGGAACGGATTGAGAAGATATTTTTTATCACAAACCCAAGACTTCCTGATAATCCTATTATATTTGCATCTCGTAGGTTTCTTGATTCCACAGAATACACGAGTGAAGAAGTTCTAGGGAGAAACTTATGGTTTCTTCAGGGACCTGAAACAGATCCAACAACTGTCTCAAAGATAAACAATGCAATTGAAGAGCAGAGAGAAATCACTCTCCAGATAATCAACTATACAAAGAGTGGAAAAAAGTTCTTGAATTTATTCCACTTGCAACCCATGTGTGATCAAAAGAAGGGCGAGCTTCAATATTTCATTGGTGTGCAACTTCATCAAAAACCTTCGAGAGACCGGCTTTTAGATCGGACGGAGCATGAAAGTGCTAAGCTGGCCAAAGCTGTAGCCGAAAATGTTGACAAGGCTGTCCGTGAACTTCCTGATGCCAACTTGAAACCAAAGAACTTCTGGGAAATCTACTGTCAGCCAGTCTTGCCAAGGCCTCACAAGAAGTGCACTCTTTCCTGGATAGCCATACAAAAGGTTACCAGTCAGGGTGAAAAGATTGGACTCCATCATTTCAGGCCAATAAAACCTCTGGGTTTTGGAGACATTGGCAGTGTTCATTTGGTAGAACTAAAAGGAACAGGTGAACTCTTTGCTATGAAGGCTATAGAAAAGTCGGCAATATTAAATCGAAACAAGGTTCATCGAGCATGCATGGAAAGGGAAATCATATCACTTTTGGATCATCCTTTCATGCCAACACTATACTCTTCATTTCAGTCGCGTACACACATTTTTCTTATTATGGACTTCTGCCCCGGTGGAGAGTTGTTTACCTTTCTTGACAAGCAGCCAATGAAAATGTTTAAAGAGGAAGCTGCTAGGTTCTATGCTGCAGAAGTTGTCATTGCTTTGGAGTACCTTCACTGTTTAGGTATTATTTACAGAGACCTAAAACCCGAAAACATTCTACTCCAGAAAGACGGTCATATCATCCTCACTGATTTCGATTTATCGTTTAAGACATCTAACATACAAACAATAGAATCTTCACCCCCGAGAAAGAGAACATGTAGGCATAAATCACTGCCGACATTCGTCATCGAACCTATGGTAGAACTGAATTCATTCATTGGAACTGAAGAGTATATTGCCCCAGAAATCATCAAGGGAGCAGGCCATAGTAGTTCTATTGACTGGTGGACTCTAGGTATCTTATTGTATGAAATGCTCTATGGTCGCACTCCCTTCAAAGGCAAAAACAGGAAGAAAACTTTTGCCAATATTTTGTTCAAGGACTTAACCTTCCCCCTAAGTATTCGGGCAAGTCTTGCAGCAAAACAGCTGATTGATGCACTACTACAGAGAGACCCTGCACGTCGTCTAGGTTCAAGTAACGGTGCCGATGAAATCAAACGACATCCATTTTTTCGTCAAATAAATTGGCCTAAGATTCGAACCATGACACCACCACAGCCAGAAGTAGCCCTTCAAATAATTCAGAGTGATCCAAAAGCTAATGATTTGAAGTGGGAAGATGGAGTGCTCAGTCATTCAATGGGTGCTGATATTTTCTGAAGGATCTCTATCTCAGCAGAAAAATTGCATTTTAAAAAGCATGGGTGTGAAGAAAAGAGAGGATCATTGACCTCCTAGAGTAAGGAGACATTTAGCTTTGTTTATATATGTGTGATAGAATACCATTCAGAAGCATTCAGCCTATAAATAGATGTGTATAAATGCTTTTGAGTAGAATATTAAACAATAAATCCATTTTTATCATGATTAAGAAGTCTCAAAGAAATCCCAAGTGGTGCCTTTATGGTAA 3102 40.81 MKKMNRTNFILRFLQGPETDKNEVAKIRDAIRKGSSYCGKLLNYKKNGTPFWNLLTVGPVKDSHGNIIKFIGMQVEIPKNTEGMKKSSYSNKTVLDEKEKTMRSTSIIEVQAEREIRSIVEVQAVKSLRSHIQSKRHDADTKNEEPETTDVDYALYKALDDENISTADNQKAWFKERTLGSAVECEEETVVETSVFKPRNGDHVAKRERDTRQGIELATTLERIEKIFFITNPRLPDNPIIFASRRFLDSTEYTSEEVLGRNLWFLQGPETDPTTVSKINNAIEEQREITLQIINYTKSGKKFLNLFHLQPMCDQKKGELQYFIGVQLHQKPSRDRLLDRTEHESAKLAKAVAENVDKAVRELPDANLKPKNFWEIYCQPVLPRPHKKCTLSWIAIQKVTSQGEKIGLHHFRPIKPLGFGDIGSVHLVELKGTGELFAMKAIEKSAILNRNKVHRACMEREIISLLDHPFMPTLYSSFQSRTHIFLIMDFCPGGELFTFLDKQPMKMFKEEAARFYAAEVVIALEYLHCLGIIYRDLKPENILLQKDGHIILTDFDLSFKTSNIQTIESSPPRKRTCRHKSLPTFVIEPMVELNSFIGTEEYIAPEIIKGAGHSSSIDWWTLGILLYEMLYGRTPFKGKNRKKTFANILFKDLTFPLSIRASLAAKQLIDALLQRDPARRLGSSNGADEIKRHPFFRQINWPKIRTMTPPQPEVALQIIQSDPKANDLKWEDGVLSHSMGADIF 744
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 51823753 51835202 + XM_039031920.1 Bhi05g01529 35739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01529 744 CDD STKc_phototropin_like 409 715 - -
Bhi05g01529 744 PANTHER BNAA02G07840D PROTEIN 12 743 - -
Bhi05g01529 744 Pfam PAS domain 235 326 IPR000014 -
Bhi05g01529 744 Pfam PAS domain 14 76 IPR000014 -
Bhi05g01529 744 ProSiteProfiles PAS repeat profile. 213 286 IPR000014 -
Bhi05g01529 744 Gene3D Phosphorylase Kinase; domain 1 410 494 - -
Bhi05g01529 744 SUPERFAMILY Protein kinase-like (PK-like) 391 723 IPR011009 -
Bhi05g01529 744 SUPERFAMILY PYP-like sensor domain (PAS domain) 11 75 IPR035965 -
Bhi05g01529 744 ProSiteProfiles PAC domain profile. 35 89 IPR000700 -
Bhi05g01529 744 PANTHER FLIPPASE KINASE 1-RELATED 12 743 - -
Bhi05g01529 744 SUPERFAMILY PYP-like sensor domain (PAS domain) 228 327 IPR035965 -
Bhi05g01529 744 Gene3D PAS domain 6 141 - -
Bhi05g01529 744 ProSitePatterns Serine/Threonine protein kinases active-site signature. 532 544 IPR008271 GO:0004672|GO:0006468
Bhi05g01529 744 CDD PAS 227 329 IPR000014 -
Bhi05g01529 744 TIGRFAM sensory_box: PAS domain S-box protein 239 324 IPR000014 -
Bhi05g01529 744 SMART serkin_6 411 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi05g01529 744 Gene3D PAS domain 202 363 - -
Bhi05g01529 744 Pfam Protein kinase domain 413 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi05g01529 744 ProSiteProfiles Protein kinase domain profile. 411 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi05g01529 744 Gene3D Transferase(Phosphotransferase) domain 1 495 711 - -
Bhi05g01529 744 SMART pac_2 38 80 IPR001610 -
Bhi05g01529 744 SMART pac_2 290 333 IPR001610 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01526 Bhi-Chr5:51823752 Bhi05g01529 Bhi-Chr5:51823753 8.17E-07 dispersed
Bhi05g01527 Bhi-Chr5:51823752 Bhi05g01529 Bhi-Chr5:51823753 0 dispersed
Bhi05g01529 Bhi-Chr5:51823753 Bhi10g01274 Bhi-Chr10:29695555 7.24E-19 dispersed
Bhi05g01528 Bhi-Chr5:51823753 Bhi05g01529 Bhi-Chr5:51823753 7.08E-07 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87767 PF00069 Pkinase 3.30E-63 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01529 K20715 - csv:101213364 1246.88