Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01535 TTTTCCTGTTAAGGATTCTCGGTTAGTTGCAGATGAATTTGATGAGGAAAATGTTTGTGTGTAAGAGAGATTTGAGTACCTTGGTTGTTATTGTGGCTTCTTTGGTGTACTTTGGAGCTGTGAGCAGCCAACCGATCCGTGACCATCGTTTTACCTATGTTGGATTCAATGAAAGGGAGCACAACCAACAATTCACCTTCACACCAAGTTCTTCCATCGATGGTGGGGCACTGCAGTTAACTCCTGACTCGCAGAACGAGGTTGTTAGGCTTCAAAATACATCTGGCCGCATTATGTACCGTGAGCCGTTCAAATTATGGCTAGCTGATATTGATAAAAAGGAGAAAAATTACATTGTTGCTTCATTCAGCTCATACTTTTACATCAATATTTTCAGAAGGGAAGAATGGAATGCTGGCGAGGGACTTACTTTTCTTATAGCTCCAACCACTGATGTACCTGAACAGAGCTGGGGGCAGTGGATGGGCCTCACCAACATAACCACCGACGGCGACCACAGAAACCAAATTGTAGCCATCGAATTCGATACTGAGAAGCAGGATTTTGACCCCGACAACAACCATATCGGTCTGAACATCAACTCCATTAAATCGACGAAGACTGTTTCTCTGGATAAAGCTGGCATAGTTTTATCCCCAAAGACCGGAACTAACCACAGTATATGGGTTGATTACGATGGAAAAGCCAAACTTTTGCAGGTTTACATGTCCATAAACAAAGATCCAAAACCTGATAAGCCTCTTCTCAATGAAACGATAAACCTGAAAGATTTTGTGAAACAAGAATCATACATTGGATTTTCTGCTTCTACAGGAAGCCCAGAAATTCAGTTGAACTGTGTCTTGGAATGGACACTCAATTTGGAACGTCTGCCAGAGAAGAAAGATCTAACATGGTTGAAGATCCTTGCAGGGGTTGGAATTCCTATACTAACAATCACAATTCTGGTTGGGGTTTGGATGTTTGTTGGTTATAGGAAGAAGAGGAGAGAGAACAGGGATGTGGAGTCAAATGTTCAGGGCACACTGAAGAGGTTGCCTGGAATGCCCAGAGAGTTCAAGTACAAGGAACTAAAAAGAGCGACGCATAACTTCCATGAAAGCATGGTTCTAGGAAATGGAGGATTTGGGGTTGTGTACAAAGGGGTTCTTCAGGACAAGGATAGGGACATTACCGCATCTTCAAATTCTGTTTCCAGGCTTGAAATTGCCGTCAAGAAATTCTCCAGGGACAGCATTAAGAGCAAAAGTGATTTTCTGGATGAGCTCACCATTATTCACCGTCTTCGCCACAGAAACCTTGTCCGCTTAGAAGGATGGTGCTATGAGAAAGGGAAGCTTTTATTAGTATATGACTTCATGCCTAATGGAAGCCTTGAGAATCACCTATATGACGTTGATGACGAGAATGTTCTCAACTGGAGACATCGCTATAAAATTCTTGTAGGAGTTGCATCTGCGTTGCATTACCTGCATAATGAGTATGACCAGAAAGTATTGCACCGAGATATCAAATCAAGCAATATCTTGCTTGATTCTGACTTCAATGCTCGTCTAGGGGATTTCGGCCTTGCTAGAGCCTTGGATCCTGAAAGGAACTCTTATGCAGACCTGCAGTGTGGTGGAGTTGCAGGCACAATGGGTTATGTTGCTCCCGAATGCTTCCATGAAGGAAGGGCTACTCCTGAATCTGATGTATATGGTTTCGGGGCAGTGGTGCTTGAGATCGTTTGTGGCAGGAGACCAGGAACTATTGTTGAAGACGAGCAAAATCAGTATAGCCTAATTGATTGGGTGTGGAAGGTACACCGCGAAGGACGCATTGAAAGAGCTGTCGATAACCAGCTGGGTAATGATATTGTGGTTGATGAAGCTAGAAGGCTTCTACTACTTGGGTTGGCATGTTCACATCCGATAGCAAGTGAAAGGCCACAAACTCAGGCTATAATCCAGATTTTAAATGGAGCTTTGCTTGCGCCTCAAGTACCTCCATTCAAGCCAGTCTTCATGTGGCCTCCCACGAGCAGTTCTTCTACCAGTTCTATTCTCACTTCATTGTCAAACACGAATAACTCTCTTCCATGAAGTTTTCGCCATAGGTAGTCCTTTGCTTCGGTCTCCGCAACTTACCTGAAAACCATGTAGCACAACATCAAATTGGTGTAGAAGATATCATTTGTTTATTATTGTTATGATTCTCACTTTGACATATGTGGGGATAGAATATGTACACCTGGGCTCAATCTCCCAATCATCCTGAGAGGCCCTTCAGGTTGCTTCTGCACAATGCCCAATGCCCAATGCACAACGCACTTGTATGTATGAAACTTCAATTTTTTTTTTTTCTTTTTCTTCTTTGCCTACAGAGTATCATCATCAAATCATCCTATTCACCGTGCTGCCAGACAACCCTACCCAATGTACCATTATTTTTGCTTCACAGATACAATTGACATGTCTTTGTTTTATTTATAAATCAAAGAGCATTTAAGAACTGCCTAGATTACATATTATAGAAAATTCAAGTCCAAGTTTTAAGTTA 2562 42.35 MNLMRKMFVCKRDLSTLVVIVASLVYFGAVSSQPIRDHRFTYVGFNEREHNQQFTFTPSSSIDGGALQLTPDSQNEVVRLQNTSGRIMYREPFKLWLADIDKKEKNYIVASFSSYFYINIFRREEWNAGEGLTFLIAPTTDVPEQSWGQWMGLTNITTDGDHRNQIVAIEFDTEKQDFDPDNNHIGLNINSIKSTKTVSLDKAGIVLSPKTGTNHSIWVDYDGKAKLLQVYMSINKDPKPDKPLLNETINLKDFVKQESYIGFSASTGSPEIQLNCVLEWTLNLERLPEKKDLTWLKILAGVGIPILTITILVGVWMFVGYRKKRRENRDVESNVQGTLKRLPGMPREFKYKELKRATHNFHESMVLGNGGFGVVYKGVLQDKDRDITASSNSVSRLEIAVKKFSRDSIKSKSDFLDELTIIHRLRHRNLVRLEGWCYEKGKLLLVYDFMPNGSLENHLYDVDDENVLNWRHRYKILVGVASALHYLHNEYDQKVLHRDIKSSNILLDSDFNARLGDFGLARALDPERNSYADLQCGGVAGTMGYVAPECFHEGRATPESDVYGFGAVVLEIVCGRRPGTIVEDEQNQYSLIDWVWKVHREGRIERAVDNQLGNDIVVDEARRLLLLGLACSHPIASERPQTQAIIQILNGALLAPQVPPFKPVFMWPPTSSSSTSSILTSLSNTNNSLP 690
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 51956076 51958881 - XM_039031629.1 Bhi05g01535 35745

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01535 690 SMART serkin_6 361 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi05g01535 690 CDD lectin_legume_LecRK_Arcelin_ConA 40 283 IPR001220 GO:0030246
Bhi05g01535 690 ProSiteProfiles Protein kinase domain profile. 361 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi05g01535 690 Gene3D Transferase(Phosphotransferase) domain 1 450 656 - -
Bhi05g01535 690 PANTHER - 16 688 - -
Bhi05g01535 690 Gene3D - 36 297 - -
Bhi05g01535 690 Pfam Protein tyrosine and serine/threonine kinase 365 586 IPR001245 GO:0004672|GO:0006468
Bhi05g01535 690 SUPERFAMILY Protein kinase-like (PK-like) 344 676 IPR011009 -
Bhi05g01535 690 Gene3D Phosphorylase Kinase; domain 1 346 449 - -
Bhi05g01535 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 495 507 IPR008271 GO:0004672|GO:0006468
Bhi05g01535 690 CDD STKc_IRAK 367 651 - -
Bhi05g01535 690 Pfam Legume lectin domain 38 293 IPR001220 GO:0030246
Bhi05g01535 690 SUPERFAMILY Concanavalin A-like lectins/glucanases 38 297 IPR013320 -
Bhi05g01535 690 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 16 688 - -
Bhi05g01535 690 MobiDBLite consensus disorder prediction 671 690 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01535 - - - csv:101218232 1226.46
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01535 Bhi-Chr5:51956076 Bhi11g02530 Bhi-Chr11:68415541 7.87E-136 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g321 . . . . . . . . Cmo19g00842 Cmo11g01827 . . . . . Cpe04g00668 Cpe15g00663 Bhi05g01535 . . . . . . Cla02g00321 . . . . . . Cone12ag1284 Cone8ag1348 . . . Csa07g00223 . . . Blo13g00458 . . Bpe15g00769 . Bma03g00652 Bma08g00704 . . . Cma11g01293 Cma19g00825 Car11g01453 Car19g00640 . . . . . . . . . . . . . . . . Lsi11g01317 . Chy01g00557 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006270 1 1 1 3 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 1 1 38
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87768 PF07714 PK_Tyr_Ser-Thr 2.80E-43 CL0016 Bhi PK