Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01542 CTCTCTCTCTCTCTCTCTCTCTGTTCTCTTTCTTCTCTCTCTTTCTGTGTGATTTTGTTGAACAGGTTTCGACTCACAAGGCTTGCAACTTGGCAACAAACCGAGAGGGGGAAAAGCAAAATCGATGAACAATCAGTTCTAATGAAGAGATTCACCTTCGAATCGGGCGTTGAATTGAAGCAATAACTGGTAATTCTCTTTGATCCAATCCAAATTCGCAGTATGTTTCGCTGAATGGATCTGTGTTCTTCGATCCTGCACCAATGTCGGTTTCACAAACCCTAGGTGGCACGTCCAGATGCGGCCGTGCGATCGGCCCTTCTCTCGATAAGATTGTCAAGAACGCAGCCTGGCGTAAGCATTCTCACCTTGTTTCCTCTTGTAAATCCGTTCTTGATAAGCTTGATTCTATTAAGGAGGCTGCTCCTGATCCTGCCTCCCCTCTCGCCGGCCTTTCTCCAGCTGATGCGGAGTTTGTGCTCCAACCTCTTCTTTTGGCTCTTGATGCCGCCTATGTCAAGGTTGCTGAGCCCGCACTTGAGTGCGTTTTCAAATTGTTCTCCCGCGGTCTTTTCCGTGGCGAGATCGAGCGGCCGGATGGCGAGGCAAATTCCAGTGCCATTTCCATTGTGTATAAGATTGTTGAGTCTGTTTGTAAATCAGGAGGTCTAGGTGATGAAGGAATTGAGCTCACTGTTCTAAGAGTGTTGCTCTCTGCGGTTCGGAGCCCTTGTGTATTGATCCGCGGGGATTGTCTGGTTAATGTTGTTCGGACTTGTTATAATGTGTATCTCGGTGGCTTAAGTGGTACGAATCAGATCTGTGCAAAATCTGTTTTAGGTCAAGTAATGGTCATTGTTTTCAGTAGGGTGGAGGAGGACTCCATGGATGCTCCCATGAGGATCATTTCTGTGAGTGAATTATTGGAATTTACTGATAAGAACTTGAATGAAGGAAATTCAATATATTTTTGCCAGAACTTTATCAATGAGGTAATGGATGCCAGCGAAGGGATTGCAGATAAGAAATTATATGCGTTTGCGGCACAATTGCAGAATGGCCATGCTTCGCCGCTGAAAGCTGACAATAAAGGTGAATCTGATATAGGAGAAACGGAAGATGTTTATAGTAAGATTAGGGAGGATGGATTCTATTTGTTTAAGAATTTGTGTAAATTGTCAATGAAATTCTCATCACCGGAGCACCCAGATGATCAGATCCTTTTAAGAGGGAAAATATTGTCTCTGGAACTGTTAAAGGTGGTTATGGATAATGCAGGTCCAGTTTGGCGCTTTAACGAGAGGTTTCTCAATGCTATCAAGCAATTTCTCTGCTTATCATTATTAAAGAACAGTGCCCTCTCGGCGATGGCCATCTTCCAGCTTCAATGTTCTATTTTTACGAGCTTGTTGACAAAATTTAGATCAGGATTGAAAGCAGAAATTGGCATCTTTTTTCCCATGCTTGTCCTCCGAGTGCTTGAGAATGTACTTCAGCCTAGTTTCTTGCAGAAGATGACCGTACTCAATTTGTTGGATAAGATATCTCAAGATCCACAGATTATGGTCGACATTTTTGTCAACTATGATTGTGATGTTGATTCTCCAAATATTTTTGAAAGGATTGTGAATGGCCTTTTGAAAACTGCTCTTGGACCGCCTTCTGGTTCAACCACAACTTTGTCTCCAGCACAGGATGTTACATTTAGGCTTGAATCTGTTAAGTGTTTGGTAAGCATCATTAAATCAATGGGAACTTGGATGGACCAACAAATGAAGCTAGATGATCCAAATTTACTCAAGACTTCTGAGAACGACGCTTCACCTGAGAATCAATTAAGTGGGGAAGAAACAGCTGCTGTTGACTCTGAGCTTCATCCGGATGGTAATTCTGAGTTCTCAGATGCTGCTACACTTGAGCAAAGAAGAGCGTACAAAATCGAACTCCAGAAAGGTATTTCACTGTTCAATAGGAAACCTTCCAGGGGTATTGAGTTTCTGATCAGCACAAAAAAAGTTGGTGGTTCTCCTGAAGAGGTGGCTGCTTTTCTCAAAAATACTAACGGCCTGAATGAAACAGTCATTGGGGATTATTTGGGTGAAAGGGAGGAATTCCCTTTGAAAGTCATGCATGCTTATGTTGATTCATTTAATTTTAAAGTGATGGACTTTGGCGAAGCAATAAGGTTTTTCCTGCGGGGCTTCAGGTTACCAGGAGAGGCACAAAAGATTGATCGCATCATGGAGAAGTTTGCCGAGCGGTACTGTAAATGTAACCCTGGTTCATTCACAAGTGCAGATACCGCTTATGTGCTTGCTTATTCTGTAATTATGCTGAACACAGATGCCCATAATAACATGGTGAAAGAAAAGATGACAAAAGCTGATTTTATTCGGAACAATCGAGGAATTGATGACGGCAAGGACTTACCTGATGAGTATCTTGGTGCTCTTTATGATCAGATTGTTAGGAATGAAATTAAGATGAATTCTGATTCTTCGGCTTCACAAAGTAAGCAGGCGACTAGCATCAACAAACTTTTGGGCTTGGATGGTATACTCAATTTAGTTTCTTGGAAGCAGACAGAAGAAAAAGCTGTTGGTGCAAATGGGCTTCTTATAAGGCACATACAGGAGCAGTTTAAGGCCAAGTCTGGAAAATCTGAATCTGTTTATCATGCTGTGACAGATGTATCAATATTGAGGTTTATGGTGGAAGTGTGCTGGGGTCCTATGTTGGCGGCATTCAGTGTGACTCTTGACCAAAGTGATGATAAGCTTGCTACTTCTCAATGCTTACTAGGCTTTCGGCATGCAGTGCATGTCACAGCTGTCATGGGTTTACAGACTCAACGGGATGCTTTCGTGACATCCATGGCTAAGTTTACCTATCTTCACTGTGCTGCAGATATGAAACAAAAAAACGTTGAAGCTGTAAAGGCTATAATATCGATTGCCATAGAGGATGGTAATTTTCTTCAAGAGGCATGGGAGCACATATTTACATGTCTCTCCAGAATTGAGAATTTACAATTATTGGGAGAGGGTGCGCCATCCGACGCATCGTTTTTGACCACATCAAGTATCGAAACTGAAGAGAAAGCACCAAAGTCGGTGGGTTTATCATCTCTGAAGAGAAAAGGAAGTCTCCAAAATCCAGCTGTTATGGCTGTTGTTCGTGGAGGTTCATACGACAGCACCTCACTTGGAATGAATTCTTCTCCAGGACCAGTAACTCCTGAACAGATTAACCACCTAATTTCAAACTTGAATTTGCTTGAGCAAATAGGCAATTTTGAGTTGAACCACGTATTTGCTCATAGTCAAAGCTTGAACAGTGAAGCAATAGTAGCATTCGTGAAGGCTCTTTGCAAAGTTGCTATTGCAGAGTTGCAGTCTCCTACAGACCCACGTGTGTTCAGCCTCACTAAATTAGTTGAAGTGGCGCATTACAACATGAACCGCATCAGATTGGTGTGGTCTCGCATGTGGAATGTTCTCTCTGATTTCTTTGTGTCAGTTGGCTTGTCAGAAAACCTGTCAGTTGCAATATTTGTGATGGATTCACTGAGGCAGCTTGCGATGAAATTTTTGGAGCGTGAGGAGCTTGCAAATTATAACTTCCAGAATGAATTTTTGAGACCCTTCGTAATAGTTATGCAGAAAAGCAGCTCCACAGAAATTAGGGAATTAATTGTTCGGTGCATTTCGCAGATGGTTCTCAGTCGGGTCAATAATGTGAAATCTGGATGGAAAAGCGTTTTTATGGTTTTCACTGCTGCTGCTGCTGATGAGCGGAAGAATATTGTCTTATTGGCTTTCGAAACCATGGAAAAAATAGTTCGAGAATATTTTCCTTACATAACTGAGACTGAGACTACAACATTTACTGATTGCGTTCGATGTCTGATTACTTTTACAAATAGCAGATTTAATAGTGATGTCAGTCTCAATGCCATTGCATTCCTTCGGTTTTGTGCGGTAAAACTTGCAGAAGGAGGACTCGTTTGCTATGAGATGGTGGGAGACAATGTTTCATCCAATTCTCCAGATACACCCACACCCACGCCTACGCCCACAGATAAAGATGATTATGCTTCCTATTGGGTTCCGTTGCTTGCAGGGCTATCAAAGTTGACATCTGATCCTAGATCACCAATCAGAAAAAGTTCCTTGGAAGTACTTTTTAATATCCTGAAGGATCATGGCCATCTTTTCTCGCGTCAATTTTGGGTTGGTGTTATCAATTCCGTAGTCTTCCCCATCTTTAGTTCTTTGCATGACAAGAAAGAAGTGGACATGAATGAAAATGATGAATATTCAGAAGGAAGTACATGGGATTCTGATACCTGTGCAGTGGCAGCAGATTGTTTAGTAGATCTGTTTGTTAGTTTTTTCAATGTAATAAGGTCTCAACTAGCCGGCGTGGTGACGATTCTGACTGGATTCATTAGGAGTCCGATCCACGGTCCTGCCAGCACTGGCGTTGCTGCATTAATGCGTTTGGCAGGTGACTTAGCTAACAGGCTTACTGAAAACGAGTGGAGAGAGATTTTTCTTGCTTTGAAGGAAGCGGCCACGTTAACCGTCCCTGGATTTCTCAAGGTCCTGAGGACCATGGATGACATCAACATTCCCGGGATCTCTCAATCTTATTATGATGTGGATGTGGCTTCAGATCAAGGTTTGTCAACCGATGGTCGCGATGACGACGACCTCCAAACAGCCTCCTACATTGTTTCGAGAATGAAGAGTCATATCTCAATGCAACTCCTCGTCATACAGGTCATTACTGACCTATACAAGAACCATACCCAACCTTTCTCAGAAGGCAACATTTCCATCATTCTTGAGATATTTTCTTCCATTTCCACACATGCCCAGAAACTGAGTTCTGATACAATCCTTCAGAAGAAGCTACAAAAAGCTTGCTCCATTCTGGAGATATCCGACCCACCCGTGGTTCACTTCGAAAATGAGTCTTATCAGAGCTACCTCAACTTTCTCCAGAATATGCTTGCGAATAACCCATTGGTCACTAATTCAACTCTTATCGAATCTGAACTTGTCACAGTATGTGAACAAATTTTGCATATTTACTTGAAGTGCACCGGGATGCCAAGTGAGGGAAAAGAAACCAACCAGCCTGTGCTACATTGGATTCTTCCTTTGGGTTCAGCAAGGAAGGAGGAACTGGCTGCTCGAACGTCTCTAGTTGTCTCGGCATTGCGGGTTCTATGCGGGTTCGAAAGGGACATATTTAAAAGGTATGCTGCACAGCTTTTCCCATTGTTGGTGGAGCTTGTAAGGAGTGAACATAGCTCTGGAGAAGTTCAGGTTGTTTTGAGCATCATATTTCAATCATGTATAGGCCCAATAATTATGCAATAATAAGATTATATACACACATATATATATTCTTTGTGGTATACTTAGCATTCCAATTGTAAATCAATCTTTAACTAGGTGGCTTGAGGGTGGAGCCAGCCACATTATTTTGTAGAATATGCCAAAGTCCAAAATTTTTGCCTAGTGGAAGAGGATGTATGTGCTAGTATTGATAATATAAAATTGAGAGGATTTCCTTTTCCTTTTTTGTTTCA 5602 42.11 MSVSQTLGGTSRCGRAIGPSLDKIVKNAAWRKHSHLVSSCKSVLDKLDSIKEAAPDPASPLAGLSPADAEFVLQPLLLALDAAYVKVAEPALECVFKLFSRGLFRGEIERPDGEANSSAISIVYKIVESVCKSGGLGDEGIELTVLRVLLSAVRSPCVLIRGDCLVNVVRTCYNVYLGGLSGTNQICAKSVLGQVMVIVFSRVEEDSMDAPMRIISVSELLEFTDKNLNEGNSIYFCQNFINEVMDASEGIADKKLYAFAAQLQNGHASPLKADNKGESDIGETEDVYSKIREDGFYLFKNLCKLSMKFSSPEHPDDQILLRGKILSLELLKVVMDNAGPVWRFNERFLNAIKQFLCLSLLKNSALSAMAIFQLQCSIFTSLLTKFRSGLKAEIGIFFPMLVLRVLENVLQPSFLQKMTVLNLLDKISQDPQIMVDIFVNYDCDVDSPNIFERIVNGLLKTALGPPSGSTTTLSPAQDVTFRLESVKCLVSIIKSMGTWMDQQMKLDDPNLLKTSENDASPENQLSGEETAAVDSELHPDGNSEFSDAATLEQRRAYKIELQKGISLFNRKPSRGIEFLISTKKVGGSPEEVAAFLKNTNGLNETVIGDYLGEREEFPLKVMHAYVDSFNFKVMDFGEAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPGSFTSADTAYVLAYSVIMLNTDAHNNMVKEKMTKADFIRNNRGIDDGKDLPDEYLGALYDQIVRNEIKMNSDSSASQSKQATSINKLLGLDGILNLVSWKQTEEKAVGANGLLIRHIQEQFKAKSGKSESVYHAVTDVSILRFMVEVCWGPMLAAFSVTLDQSDDKLATSQCLLGFRHAVHVTAVMGLQTQRDAFVTSMAKFTYLHCAADMKQKNVEAVKAIISIAIEDGNFLQEAWEHIFTCLSRIENLQLLGEGAPSDASFLTTSSIETEEKAPKSVGLSSLKRKGSLQNPAVMAVVRGGSYDSTSLGMNSSPGPVTPEQINHLISNLNLLEQIGNFELNHVFAHSQSLNSEAIVAFVKALCKVAIAELQSPTDPRVFSLTKLVEVAHYNMNRIRLVWSRMWNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIVMQKSSSTEIRELIVRCISQMVLSRVNNVKSGWKSVFMVFTAAAADERKNIVLLAFETMEKIVREYFPYITETETTTFTDCVRCLITFTNSRFNSDVSLNAIAFLRFCAVKLAEGGLVCYEMVGDNVSSNSPDTPTPTPTPTDKDDYASYWVPLLAGLSKLTSDPRSPIRKSSLEVLFNILKDHGHLFSRQFWVGVINSVVFPIFSSLHDKKEVDMNENDEYSEGSTWDSDTCAVAADCLVDLFVSFFNVIRSQLAGVVTILTGFIRSPIHGPASTGVAALMRLAGDLANRLTENEWREIFLALKEAATLTVPGFLKVLRTMDDINIPGISQSYYDVDVASDQGLSTDGRDDDDLQTASYIVSRMKSHISMQLLVIQVITDLYKNHTQPFSEGNISIILEIFSSISTHAQKLSSDTILQKKLQKACSILEISDPPVVHFENESYQSYLNFLQNMLANNPLVTNSTLIESELVTVCEQILHIYLKCTGMPSEGKETNQPVLHWILPLGSARKEELAARTSLVVSALRVLCGFERDIFKRYAAQLFPLLVELVRSEHSSGEVQVVLSIIFQSCIGPIIMQ 1708
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 52073663 52083418 - XM_039032821.1 Bhi05g01542 35752

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01542 1708 SUPERFAMILY Sec7 domain 554 745 IPR035999 GO:0005085|GO:0032012
Bhi05g01542 1708 SMART sec7_5 554 739 IPR000904 GO:0005085|GO:0032012
Bhi05g01542 1708 MobiDBLite consensus disorder prediction 511 530 - -
Bhi05g01542 1708 Gene3D - 1098 1321 IPR011989 -
Bhi05g01542 1708 Pfam Dimerisation and cyclophilin-binding domain of Mon2 16 206 IPR032629 -
Bhi05g01542 1708 ProSiteProfiles SEC7 domain profile. 550 737 IPR000904 GO:0005085|GO:0032012
Bhi05g01542 1708 Pfam C-terminal region of Mon2 protein 1273 1343 IPR032817 -
Bhi05g01542 1708 Pfam BIG2 C-terminal domain 1501 1699 IPR046455 -
Bhi05g01542 1708 SUPERFAMILY ARM repeat 1078 1700 IPR016024 -
Bhi05g01542 1708 Gene3D - 632 752 IPR023394 -
Bhi05g01542 1708 MobiDBLite consensus disorder prediction 511 546 - -
Bhi05g01542 1708 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 293 450 IPR032691 -
Bhi05g01542 1708 PANTHER BREFELDIN A-INHIBITED GUANINE NUCLEOTIDE-EXCHANGE PROTEIN 4 9 1701 - -
Bhi05g01542 1708 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 9 1701 - -
Bhi05g01542 1708 CDD Sec7 557 739 IPR000904 GO:0005085|GO:0032012
Bhi05g01542 1708 Gene3D - 542 631 - -
Bhi05g01542 1708 Pfam Domain of unknown function (DUF1981) 1108 1190 IPR015403 -
Bhi05g01542 1708 Pfam Sec7 domain 558 739 IPR000904 GO:0005085|GO:0032012
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01542 K18442 ARFGEF, BIG; brefeldin A-inhibited guanine nucleotide-exchange protein - csv:101212521 3153.23
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00272 Bhi-Chr1:5156303 Bhi05g01542 Bhi-Chr5:52073663 0 dispersed
Bhi05g01542 Bhi-Chr5:52073663 Bhi06g00978 Bhi-Chr6:26846825 6.54E-86 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g315 . . . . . Bpe12g00159 . . . Cmo11g01803 . . . . Sed05g2136 Cpe04g00646 Cpe15g00658 Bhi05g01542 Tan02g0540 Cmetu01g0851 Lac12g0438 Hepe02g0345 . . . . . . . . . . . . . . Csa07g00216 . . . Blo13g00462 . . . . . . . . . Cma11g01317 Cma19g00818 Car11g01430 Car19g00635 . . . . . . . . . . . . . . . . Lsi11g01311 . Chy01g00565 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010065 0 1 1 0 1 1 2 1 1 1 1 1 1 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 1 1 33