Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01545 GGCTTCTTCAAGGCCTTGTATTCTTCTGAAATGGCGGCCTTTTTAGCTATAATAGTCTACTATTTAGTTCTTCTGCAAACACCCACCAACATATTTGCGGCTAAGGATGAAGAAGAGTGGAAATCTGCTACTGCAACATACTCCAAAGAAACAGATGGGTCAATTGTTACAGAAGGTGCTTGTGGTTATGGAGATCTGCATAAGGTAAGCTATGGAAAATATAGCGCTGGACTGAGTAGCATGATGTTTAATAGAGGGAGTACCTGTGGAGCTTGCTATGAGCTTAGATGTGTTGACCACATCTTGTGGTGTTTGCAAGGAAGCCCGACTGTCATTCTAACGGCCACTGACTTCTGTCCTCCCAATTACGGCTTGTCTTCGGAATATGGTGGTTGGTGTAATTTTCCCAAGGAACACTTCGAGATGTCAGAAGCAGCATTTGCTGAAATAGCGGAGAAAAAAGCAGATATTGTGCCAGTTCAATATAGGAGGGTGAGGTGTGACAGAAATGGTGGAATGAGATTCACAGTCAGTGGGAATTCTCGATTCTTTCAAGTTCTGATCACAAATGTTGGAATGGATGGTGAATTAGTGGCAGTGAAAGTAAAAGGATCAAGAACAGGATGGATACCATTGGCAAGGAACTGGGGACAAAACTGGCAAAGCAATGTCAATCTTCATGGGCAACCTCTCTCTTTTGAAGTTACCTCTAGCAGTGGAAGAGCACTTACTTCCTATAGCGTTGCACCTGGAAACTGGCAGTTTGGGCAGACATTTGAAGGGAAACAATTTTGAAATCTTTATGTAACTAAGGAATTGGAATCAAAATTTTAGGCCTATATAGAATATAACTAGAAACTTGAACATAATTATACTGGCATGTTGAATCTCATGATGGGAAAAACACA 908 41.41 MAAFLAIIVYYLVLLQTPTNIFAAKDEEEWKSATATYSKETDGSIVTEGACGYGDLHKVSYGKYSAGLSSMMFNRGSTCGACYELRCVDHILWCLQGSPTVILTATDFCPPNYGLSSEYGGWCNFPKEHFEMSEAAFAEIAEKKADIVPVQYRRVRCDRNGGMRFTVSGNSRFFQVLITNVGMDGELVAVKVKGSRTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYSVAPGNWQFGQTFEGKQF 254
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 52213478 52215198 - XM_039032260.1 Bhi05g01545 35755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01545 254 PRINTS Expansin/Lol pI family signature 29 44 IPR007118 GO:0005576
Bhi05g01545 254 PRINTS Expansin/Lol pI family signature 47 65 IPR007118 GO:0005576
Bhi05g01545 254 PRINTS Expansin/Lol pI family signature 69 87 IPR007118 GO:0005576
Bhi05g01545 254 PRINTS Expansin/Lol pI family signature 145 161 IPR007118 GO:0005576
Bhi05g01545 254 PRINTS Expansin/Lol pI family signature 199 213 IPR007118 GO:0005576
Bhi05g01545 254 PRINTS Expansin/Lol pI family signature 237 251 IPR007118 GO:0005576
Bhi05g01545 254 Gene3D - 157 254 IPR036749 -
Bhi05g01545 254 SMART dpbb_1 65 152 IPR007112 -
Bhi05g01545 254 PANTHER EXPANSIN-A15 6 254 IPR002963 GO:0009664
Bhi05g01545 254 SUPERFAMILY Barwin-like endoglucanases 29 180 IPR036908 -
Bhi05g01545 254 Pfam Lytic transglycolase 66 152 IPR009009 -
Bhi05g01545 254 SUPERFAMILY PHL pollen allergen 159 251 IPR036749 -
Bhi05g01545 254 Pfam Expansin C-terminal domain 163 240 IPR007117 -
Bhi05g01545 254 PANTHER EXPANSIN-A20 6 254 - -
Bhi05g01545 254 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 48 162 IPR007112 -
Bhi05g01545 254 Gene3D - 16 156 IPR036908 -
Bhi05g01545 254 PRINTS Expansin signature 60 74 IPR002963 GO:0009664
Bhi05g01545 254 PRINTS Expansin signature 87 98 IPR002963 GO:0009664
Bhi05g01545 254 PRINTS Expansin signature 101 111 IPR002963 GO:0009664
Bhi05g01545 254 PRINTS Expansin signature 120 137 IPR002963 GO:0009664
Bhi05g01545 254 PRINTS Expansin signature 137 150 IPR002963 GO:0009664
Bhi05g01545 254 PRINTS Expansin signature 161 173 IPR002963 GO:0009664
Bhi05g01545 254 PRINTS Expansin signature 173 194 IPR002963 GO:0009664
Bhi05g01545 254 PRINTS Expansin signature 208 229 IPR002963 GO:0009664
Bhi05g01545 254 PRINTS Expansin signature 237 253 IPR002963 GO:0009664
Bhi05g01545 254 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 172 251 IPR007117 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01545 Bhi-Chr5:52213478 Bhi07g00459 Bhi-Chr7:20231745 1.72E-91 dispersed
Bhi05g01545 Bhi-Chr5:52213478 Bhi08g00598 Bhi-Chr8:19742027 1.67E-91 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01545 - - csv:101213241 496.893