Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01560 AAAGATGTGAATTCTGATCCAAGTGTTCTTGGTGGAAGAAAGCTATCTATTTCCATACATGATGCAAATTATAGTGGATTTCTTGGTATAACAGGAGGTACACTTTTGTCCCACATAAGCAATGAAATACATGGTATCTGACACAGTTGCTATCCTTGGTCCAGAAGACTCTACAATGGCCCATATACTTTCCCATCTTTCTAATGAACTCCATATCCCATTATTGTCATTTACAGCATTAGACCCAACACTTTCATCTTTGCAATATCCATACTTCATTCAAACAGCTCCAAATGATCTGTTCCAAATGAATGCAATTGCTGATATGATTCATTATTACAGTTGGCACGACGTCGTCGTAGTTTTCACCGACGACGATCAATGTCGAAACAGTATGATTGCATTAGGTGATAAACTTGAAGAGAGAAGCTTGCAAATTTCCTCTAAAGTCCCACTTCCCCCTTACCCAACAGCAACAAGAACTGAAGTTCAAGATGCACTGACAAAGATCAAAATGATGGAATCTCGAGTAATCGTATTGTACACGTTTTCGAAAACTGGTTTCTTGGTTTTCGAAGTGGCTCAAAGCCTTAAAATGATGGAAGCTGGTTATGTTTGGATAACTTCTAGTTGGCTATCAACAGAACTAGATTCTACTTCATCACTTCCTTTGAAAATTGCCAACTCTATCCAAGGAGTTCTTACACTTCGTCTACACACGCCCAATTCGAAAAGTAAGCGATCGTTTATGTCGAGATGGAACGAGCTGAGTAATGGCTCATCAATTGGGTTGAATACATATGGCCTATATGCTTATGATACTGTTTGGATGATAGCAAGAGGAGTGAAAAAGTTATTGGATCAAAATGGCACTATCTCATTCTCCAAAGATACAAAAAATGCTGGTAGTCTTAGTGGAGAGACCTTGGATTTTAGTTCACTAAGAATCTTTAATGAAGGAAATGATTTACTTAACAATTTATTGAATATTAGAATGACTGGTTTAACAGGGCCTATTCAGTTTCTAGATAAATCCCCTTTACATCCTTCATATGATATCTTAAATGTTGTGAGATCTGGTTTGAAGAGAATTGGATATTGGTCTAACTATTCCGGTTTATCTGTCGTGGCGCCCGAAACGTTGTATGGAAAATCAATTAATCGTTCTATGTCAACCGATCAGTTAAGCAGCACAATGTGGCCTGGGGGATTGGCAACAAAGCCACGTGGTTGGGTTCTTCCGCTCGATGGAAGGCGGTTAAAAATCGCCGTTCCACGAAGAGTTAGTTATCAGGAATTCGTGACACCGGGAAATGGAAACGGAACAATCAAAGGATACTGTATTGATGTGTTCATTGCTGCTATCAATTTGCTTCCATATGCAGTTAATTATGAGTTCATTTTGTTTGGAGATGGTGAGGAGAATCCTAGCTACCTTGAACTTGTAAATAAAGTTGCATTGAAAGAATTTGATGCTGCTGTTGGTGACATTGCAATCGTGACTAGCCGGACGAAGATGGTTGATTTTACGCAGCCGTATATCGACTCGGGGCTAGTAGTTTTGGCCCCTATGAAGAAGGTGAATTCAAGTCCTTTGGCATTCCTTCGCCCATTCTCACCAATGATGTGGGCTGTCACAGCAGCATTTTTCTTCCTCATTGGATTAGTTGTGTGGATACTGGAACATCGGACAAATGAAGAATTTCGAGGACATCCTAGGACACAATTCGTCACAATCCTCTGGTTTGGCTTCTCAACTATGTTTTTTGCACAAAGAGAAAACGTTGTGAGCACACTCGGTCGCTTCGTGATTGTCGTGTGGTTTTTTGTGGTTCTAATTATCACCTCGAGCTACACCGCTAACTTGACATCGATATTTACAGTACAACTAGCCGAGTCACCTATCACAGGAATTGATTCATTGATATCTAGCAATGTGCGTATAGGATTTCAAGTTGGTTCATTTGCTGAAAGTTATTTAAGTGAGCAACTTAATGTCCAAAAATCTAGGCTCATTGCTCTTGGATCCCCAGAAGAGTATGCTGCTGCCCTCAAGAATGGGACCGTCAGCGCTATTGTCGACGAGCAGCCATACATCGATCTCTTTCTCACCGAGTATTGCGATTATTCGATACAAGGTCAACAGTTCACCAAAAGTGGATGGGGATTTGCATTTCCACGAGACTCTCCATTAGTGGTAGATTTATCGACCGCCATACTCACTCTATCAGAAAATGGCCATCTTCAAAAGATTCACGACAAGTGGTTCTCAAGAAAATCTTGCAGTTCTGGAGATTCCGAACTCGATTCCGAGCAACTTCACTTGCAGAGCTTCATCGGATTGTTCTCCATTTGTGCCGGTGTGTGTTTATTCTCTCTTTTGCTCCATTTCTTCTACACAATGTGCCAATTCAATCGCCATTTGAAGAAAGATCCAGAAGCTTCGACCACCGGTGGCGATGGCCATGGCGATGGCGATGGCGTTGGCGGTTCCTGCCCTACGCGGCTGCGAAAATTCTTTAAGTTCGCAGACAAGAAGAAGGAAAGAAAGATGAGCTATTCGAAGAGAAAGATCGAAGATAGAGATACAGTCTCGAGTGAACGTGGAGAAGGTTAGGTTTTTGCAAAGTTCAGATCTCGAAGAATCGATTGATTCTCTTATCATTTTGTTTTTTTGTTTTAAAGTCGCAACTTCAATTAGCGACTATACCCTTTTTTTTTTTTTTTTTTTTGTGGGAGGGGTGTTGTTTTTGTATTTGAATCATTGAGTATGATAAATGCATATTTTTGTTCCCTCTTTATGTAATTAGGCTTGAAATAAGC 2823 40.45 MKYMVSDTVAILGPEDSTMAHILSHLSNELHIPLLSFTALDPTLSSLQYPYFIQTAPNDLFQMNAIADMIHYYSWHDVVVVFTDDDQCRNSMIALGDKLEERSLQISSKVPLPPYPTATRTEVQDALTKIKMMESRVIVLYTFSKTGFLVFEVAQSLKMMEAGYVWITSSWLSTELDSTSSLPLKIANSIQGVLTLRLHTPNSKSKRSFMSRWNELSNGSSIGLNTYGLYAYDTVWMIARGVKKLLDQNGTISFSKDTKNAGSLSGETLDFSSLRIFNEGNDLLNNLLNIRMTGLTGPIQFLDKSPLHPSYDILNVVRSGLKRIGYWSNYSGLSVVAPETLYGKSINRSMSTDQLSSTMWPGGLATKPRGWVLPLDGRRLKIAVPRRVSYQEFVTPGNGNGTIKGYCIDVFIAAINLLPYAVNYEFILFGDGEENPSYLELVNKVALKEFDAAVGDIAIVTSRTKMVDFTQPYIDSGLVVLAPMKKVNSSPLAFLRPFSPMMWAVTAAFFFLIGLVVWILEHRTNEEFRGHPRTQFVTILWFGFSTMFFAQRENVVSTLGRFVIVVWFFVVLIITSSYTANLTSIFTVQLAESPITGIDSLISSNVRIGFQVGSFAESYLSEQLNVQKSRLIALGSPEEYAAALKNGTVSAIVDEQPYIDLFLTEYCDYSIQGQQFTKSGWGFAFPRDSPLVVDLSTAILTLSENGHLQKIHDKWFSRKSCSSGDSELDSEQLHLQSFIGLFSICAGVCLFSLLLHFFYTMCQFNRHLKKDPEASTTGGDGHGDGDGVGGSCPTRLRKFFKFADKKKERKMSYSKRKIEDRDTVSSERGEG 831
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 52478218 52487480 - XM_039032792.1 Bhi05g01560 35770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01560 831 SUPERFAMILY Periplasmic binding protein-like II 357 718 - -
Bhi05g01560 831 MobiDBLite consensus disorder prediction 772 793 - -
Bhi05g01560 831 Gene3D - 491 631 - -
Bhi05g01560 831 CDD GluR_Plant 378 716 - -
Bhi05g01560 831 Gene3D - 636 723 - -
Bhi05g01560 831 PRINTS Metabotropic glutamate GPCR signature 11 37 IPR000337 GO:0004930|GO:0007186|GO:0016021
Bhi05g01560 831 PRINTS Metabotropic glutamate GPCR signature 43 62 IPR000337 GO:0004930|GO:0007186|GO:0016021
Bhi05g01560 831 PRINTS Metabotropic glutamate GPCR signature 62 78 IPR000337 GO:0004930|GO:0007186|GO:0016021
Bhi05g01560 831 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 772 - -
Bhi05g01560 831 Pfam Receptor family ligand binding region 5 318 IPR001828 -
Bhi05g01560 831 MobiDBLite consensus disorder prediction 806 831 - -
Bhi05g01560 831 Pfam Bacterial extracellular solute-binding proteins, family 3 398 717 IPR001638 -
Bhi05g01560 831 SUPERFAMILY Periplasmic binding protein-like I 7 371 IPR028082 -
Bhi05g01560 831 Gene3D - 3 308 - -
Bhi05g01560 831 SMART GluR_14 381 718 IPR001320 GO:0015276|GO:0016020
Bhi05g01560 831 Gene3D - 374 490 - -
Bhi05g01560 831 Pfam Ligand-gated ion channel 718 748 IPR001320 GO:0015276|GO:0016020
Bhi05g01560 831 Gene3D - 58 333 - -
Bhi05g01560 831 PIRSF IGluLR_plant 2 829 IPR017103 -
Bhi05g01560 831 PANTHER GLUTAMATE RECEPTOR 3.3 1 772 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01560 Bhi-Chr5:52478218 Bhi03g00758 Bhi-Chr3:14166302 0 dispersed
Bhi05g01560 Bhi-Chr5:52478218 Bhi05g01561 Bhi-Chr5:52478220 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01560 K05387 - csv:101208602 1433.31