Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01561 CTTATGAAAGCATTTTTTTTTTTTTTTGCTCAATATATGCTTCTTGTTATTAAAAGCAAAAGGTTTGAGATTATTGATGCAATCTTGGCTACTACTTCTTGTATTTGCTTTATTGTGGGATCTTCATTACTCCTCCAAGTTTAATCTCCTTTAACTTAACAGCTAAGTTTGAACTTCTTTTTTATTTGTGTTTTCTCAATTTGAAAACAAAGTATTCTGTTCTAACTTCCTGTTTTTAGTTATCAGATAATCTTTTTTCCTCTTGTTGCAAGAAAACTTGTTCTTTGGTTTATCCTGAAATTCTAGTACCATTTCATAATTACTCTCTCTATATATAGAAAGATATATTTTATTTAGAACTTATAATGATATTTTAGATAAATATGGTTTTCCATCTGTTTCTTCTGATAAGTAGTAACAATGCCGAACTTTGTTGATTCGTTTCCGTCGAACGAGTCGAGATTCGGTTGTGATATTCGATCACAGAAGGCTTAATTTTCAGCTTGATCTTTATGAGTATGGTTTGGCTTCTTTTAGTACTTCTTTGTGTTCAAGGAATTTCAGAAGGGGCCTCAAGAAATGAAGTGGTGAAAGTTGGAGCTATATTTTCACTTAGTTCTGTCAATGGGAAAGTTTCCAAGATTGCCATTGAAGCTGCTGAGAAAGATGTGAATTCTGATCCAAGTGTTCTTGGTGGAAGAAAGCTATCTATTTCCATACATGATGCAAATTATAGTGGATTTCTTGGTATAACAGGAGCAATGAAATACATGGTATCTGACACAGTTGCTATCCTTGGTCCAGAAGACTCTACAATGGCCCATATACTTTCCCATCTTTCTAATGAACTCCATATCCCATTATTGTCATTTACAGCATTAGACCCAACACTTTCATCTTTGCAATATCCATACTTCATTCAAACAGCTCCAAATGATCTGTTCCAAATGAATGCAATTGCTGATATGATTCATTATTACAGTTGGCACGACGTCGTCGTAGTTTTCACCGACGACGATCAATGTCGAAACAGTATGATTGCATTAGGTGATAAACTTGAAGAGAGAAGCTTGCAAATTTCCTCTAAAGTCCCACTTCCCCCTTACCCAACAGCAACAAGAACTGAAGTTCAAGATGCACTGACAAAGATCAAAATGATGGAATCTCGAGTAATCGTATTGTACACGTTTTCGAAAACTGGTTTCTTGGTTTTCGAAGTGGCTCAAAGCCTTAAAATGATGGAAGCTGGTTATGTTTGGATAACTTCTAGTTGGCTATCAACAGAACTAGATTCTACTTCATCACTTCCTTTGAAAATTGCCAACTCTATCCAAGGAGTTCTTACACTTCGTCTACACACGCCCAATTCGAAAAGTAAGCGATCGTTTATGTCGAGATGGAACGAGCTGAGTAATGGCTCATCAATTGGGTTGAATACATATGGCCTATATGCTTATGATACTGTTTGGATGATAGCAAGAGGAGTGAAAAAGTTATTGGATCAAAATGGCACTATCTCATTCTCCAAAGATACAAAAAATGCTGGTAGTCTTAGTGGAGAGACCTTGGATTTTAGTTCACTAAGAATCTTTAATGAAGGAAATGATTTACTTAACAATTTATTGAATATTAGAATGACTGGTTTAACAGGGCCTATTCAGTTTCTAGATAAATCCCCTTTACATCCTTCATATGATATCTTAAATGTTGTGAGATCTGGTTTGAAGAGAATTGGATATTGGTCTAACTATTCCGGTTTATCTGTCGTGGCGCCCGAAACGTTGTATGGAAAATCAATTAATCGTTCTATGTCAACCGATCAGTTAAGCAGCACAATGTGGCCTGGGGGATTGGCAACAAAGCCACGTGGTTGGGTTCTTCCGCTCGATGGAAGGCGGTTAAAAATCGCCGTTCCACGAAGAGTTAGTTATCAGGAATTCGTGACACCGGGAAATGGAAACGGAACAATCAAAGGATACTGTATTGATGTGTTCATTGCTGCTATCAATTTGCTTCCATATGCAGTTAATTATGAGTTCATTTTGTTTGGAGATGGTGAGGAGAATCCTAGCTACCTTGAACTTGTAAATAAAGTTGCATTGAAAGAATTTGATGCTGCTGTTGGTGACATTGCAATCGTGACTAGCCGGACGAAGATGGTTGATTTTACGCAGCCGTATATCGACTCGGGGCTAGTAGTTTTGGCCCCTATGAAGAAGGTGAATTCAAGTCCTTTGGCATTCCTTCGCCCATTCTCACCAATGATGTGGGCTGTCACAGCAGCATTTTTCTTCCTCATTGGATTAGTTGTGTGGATACTGGAACATCGGACAAATGAAGAATTTCGAGGACATCCTAGGACACAATTCGTCACAATCCTCTGGTTTGGCTTCTCAACTATGTTTTTTGCACAAAGAGAAAACGTTGTGAGCACACTCGGTCGCTTCGTGATTGTCGTGTGGTTTTTTGTGGTTCTAATTATCACCTCGAGCTACACCGCTAACTTGACATCGATATTTACAGTACAACTAGCCGAGTCACCTATCACAGGAATTGATTCATTGATATCTAGCAATGTGCGTATAGGATTTCAAGTTGGTTCATTTGCTGAAAGTTATTTAAGTGAGCAACTTAATGTCCAAAAATCTAGGCTCATTGCTCTTGGATCCCCAGAAGAGTATGCTGCTGCCCTCAAGAATGGGACCGTCAGCGCTATTGTCGACGAGCAGCCATACATCGATCTCTTTCTCACCGAGTATTGCGATTATTCGATACAAGGTCAACAGTTCACCAAAAGTGGATGGGGATTTGCATTTCCACGAGACTCTCCATTAGTGGTAGATTTATCGACCGCCATACTCACTCTATCAGAAAATGGCCATCTTCAAAAGATTCACGACAAGTGGTTCTCAAGAAAATCTTGCAGTTCTGGAGATTCCGAACTCGATTCCGAGCAACTTCACTTGCAGAGCTTCATCGGATTGTTCTCCATTTGTGCCGGTGTGTGTTTATTCTCTCTTTTGCTCCATTTCTTCTACACAATGTGCCAATTCAATCGCCATTTGAAGAAAGATCCAGAAGCTTCGACCACCGGTGGCGATGGCCATGGCGATGGCGATGGCGTTGGCGGTTCCTGCCCTACGCGGCTGCGAAAATTCTTTAAGTTCGCAGACAAGAAGAAGGAAAGAAAGATGAGCTATTCGAAGAGAAAGATCGAAGATAGAGATACAGTCTCGAGTGAACGTGGAGAAGGTTAGGTTTTTGCAAAGTTCAGATCTCGAAGAATCGATTGATTCTCTTATCATTTTGTTTTTTTGTTTTAAAGTCGCAACTTCAATTAGCGACTATACCCTTTTTTTTTTTTTTTTTTTTGTGGGAGGGGTGTTGTTTTTGTATTTGAATCATTGAGTATGATAAATGCATATTTTTGTTCCCTCTTTATGTAATTAGGCTTGAAATAA 3461 38.75 MSMVWLLLVLLCVQGISEGASRNEVVKVGAIFSLSSVNGKVSKIAIEAAEKDVNSDPSVLGGRKLSISIHDANYSGFLGITGAMKYMVSDTVAILGPEDSTMAHILSHLSNELHIPLLSFTALDPTLSSLQYPYFIQTAPNDLFQMNAIADMIHYYSWHDVVVVFTDDDQCRNSMIALGDKLEERSLQISSKVPLPPYPTATRTEVQDALTKIKMMESRVIVLYTFSKTGFLVFEVAQSLKMMEAGYVWITSSWLSTELDSTSSLPLKIANSIQGVLTLRLHTPNSKSKRSFMSRWNELSNGSSIGLNTYGLYAYDTVWMIARGVKKLLDQNGTISFSKDTKNAGSLSGETLDFSSLRIFNEGNDLLNNLLNIRMTGLTGPIQFLDKSPLHPSYDILNVVRSGLKRIGYWSNYSGLSVVAPETLYGKSINRSMSTDQLSSTMWPGGLATKPRGWVLPLDGRRLKIAVPRRVSYQEFVTPGNGNGTIKGYCIDVFIAAINLLPYAVNYEFILFGDGEENPSYLELVNKVALKEFDAAVGDIAIVTSRTKMVDFTQPYIDSGLVVLAPMKKVNSSPLAFLRPFSPMMWAVTAAFFFLIGLVVWILEHRTNEEFRGHPRTQFVTILWFGFSTMFFAQRENVVSTLGRFVIVVWFFVVLIITSSYTANLTSIFTVQLAESPITGIDSLISSNVRIGFQVGSFAESYLSEQLNVQKSRLIALGSPEEYAAALKNGTVSAIVDEQPYIDLFLTEYCDYSIQGQQFTKSGWGFAFPRDSPLVVDLSTAILTLSENGHLQKIHDKWFSRKSCSSGDSELDSEQLHLQSFIGLFSICAGVCLFSLLLHFFYTMCQFNRHLKKDPEASTTGGDGHGDGDGVGGSCPTRLRKFFKFADKKKERKMSYSKRKIEDRDTVSSERGEG 914
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 52478220 52488273 - XM_039032791.1 Bhi05g01561 35771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01561 914 Gene3D - 574 714 - -
Bhi05g01561 914 Pfam Receptor family ligand binding region 44 401 IPR001828 -
Bhi05g01561 914 SUPERFAMILY Periplasmic binding protein-like I 20 454 IPR028082 -
Bhi05g01561 914 Gene3D - 719 806 - -
Bhi05g01561 914 Pfam Bacterial extracellular solute-binding proteins, family 3 481 800 IPR001638 -
Bhi05g01561 914 Gene3D - 141 416 - -
Bhi05g01561 914 MobiDBLite consensus disorder prediction 855 876 - -
Bhi05g01561 914 CDD GluR_Plant 461 799 - -
Bhi05g01561 914 MobiDBLite consensus disorder prediction 889 914 - -
Bhi05g01561 914 Pfam Ligand-gated ion channel 801 831 IPR001320 GO:0015276|GO:0016020
Bhi05g01561 914 PANTHER GLUTAMATE RECEPTOR 3.3 11 855 - -
Bhi05g01561 914 SMART GluR_14 464 801 IPR001320 GO:0015276|GO:0016020
Bhi05g01561 914 SUPERFAMILY Periplasmic binding protein-like II 440 801 - -
Bhi05g01561 914 Gene3D - 457 573 - -
Bhi05g01561 914 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 11 855 - -
Bhi05g01561 914 PIRSF IGluLR_plant 1 912 IPR017103 -
Bhi05g01561 914 Gene3D - 44 391 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01561 Bhi-Chr5:52478220 Bhi03g00758 Bhi-Chr3:14166302 0 dispersed
Bhi05g01560 Bhi-Chr5:52478218 Bhi05g01561 Bhi-Chr5:52478220 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01561 K05387 - csv:101208602 1580.84