Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01624 CTTCCCCTTACTTCTCTCTCACTCCAAATCCTCAGAAAAACAAAATGCCTTTCTTCCTCCCTCTCCTCTTCCTCTCCCTTTTCTCTTCTGCCACTGCTTGTGATCGTTGTATTCATCAAGCCAAAGCCGCCTTCTATCAAGACGAAGCTGCTGGTTTATATAGAGGCGCCTGTGGCTATGGCGATCTTACATTGCAACTATCAAACGGCTACTTCTCCGCCATTATGCCTCCTCTATACAAGTATGGCGCTGGCTGTGGCGCCTGTTTTCAAGTGAGATGCAAGGACGATAAAATTTGCAGCAAGGAAGGGACGAAAATTATTGTAACAGATCGAAATGACAATACTTATACAGGATTGGTTCTTAGTCAGAAAGCTTTTGGTGAAATGGCTGTGAGTGGAAAAGATAGATTGCTATTGAGTTATGGAGTTGTGGATGTTGAATTCAAAAGGATACCTTGTATATACGATGACAAAAACTTGTTGGTTAGAGTGGAAGAATGGAGTCAATATCCTAATTACTTAGCCATTAAATTGCTTAACCAAGGTGGCCAAACAGAAATAGTAGCGATCGATATAGCTCAGGTTGGTTCCTCGAATTGGGATTATATGGGTAGGAATTATGGAGCTGTGTGGGAGACTAAAAAATCAGCTCCGAAAGGACCATTGCAATTGCGGTTTGTGGTGACTTCTGGATATGATGGAAAGTGGATTTGGGCAAAATACGTGCTTCCTGTTGATTGGAGACCTGGATTGATTTACAATACTGGAGTTCAAATTTACGATATTGCTAAAGAAGGTTGTCCAACAGAACAATGTGGCGATGGACAATGGAGACGATAGATATATGTGACTAATCCATCAAATACATGTTATATATAAGGTTGTGGTATTTGATATCTAATACCATATTTAATGTAAGAAAGAGGAAAAATAAAATAAGGGATGGATGGAGTTGTATGATTATATCATAATCATAAAGTATATAATAAAGTAGATAAATTATTAATGATATGATATTTAGTTGTCA 1029 38.48 MPFFLPLLFLSLFSSATACDRCIHQAKAAFYQDEAAGLYRGACGYGDLTLQLSNGYFSAIMPPLYKYGAGCGACFQVRCKDDKICSKEGTKIIVTDRNDNTYTGLVLSQKAFGEMAVSGKDRLLLSYGVVDVEFKRIPCIYDDKNLLVRVEEWSQYPNYLAIKLLNQGGQTEIVAIDIAQVGSSNWDYMGRNYGAVWETKKSAPKGPLQLRFVVTSGYDGKWIWAKYVLPVDWRPGLIYNTGVQIYDIAKEGCPTEQCGDGQWRR 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 53206557 53208038 - XM_039032351.1 Bhi05g01624 35834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01624 265 Gene3D - 141 246 IPR036749 -
Bhi05g01624 265 Gene3D - 11 139 IPR036908 -
Bhi05g01624 265 PANTHER EXPANSIN-LIKE A1-RELATED 5 260 - -
Bhi05g01624 265 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 40 144 IPR007112 -
Bhi05g01624 265 SUPERFAMILY PHL pollen allergen 144 240 IPR036749 -
Bhi05g01624 265 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 158 241 IPR007117 -
Bhi05g01624 265 PANTHER EXPANSIN-B3 5 260 - -
Bhi05g01624 265 Pfam Expansin C-terminal domain 148 230 IPR007117 -
Bhi05g01624 265 Pfam Lytic transglycolase 60 133 IPR009009 -
Bhi05g01624 265 PRINTS Expansin/Lol pI family signature 39 57 IPR007118 GO:0005576
Bhi05g01624 265 PRINTS Expansin/Lol pI family signature 61 79 IPR007118 GO:0005576
Bhi05g01624 265 PRINTS Expansin/Lol pI family signature 127 143 IPR007118 GO:0005576
Bhi05g01624 265 PRINTS Expansin/Lol pI family signature 186 200 IPR007118 GO:0005576
Bhi05g01624 265 PRINTS Expansin/Lol pI family signature 227 241 IPR007118 GO:0005576
Bhi05g01624 265 SUPERFAMILY Barwin-like endoglucanases 8 141 IPR036908 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01624 Bhi-Chr5:53206557 Bhi05g01627 Bhi-Chr5:53293447 5.55E-118 dispersed
Bhi05g01624 Bhi-Chr5:53206557 Bhi05g01625 Bhi-Chr5:53261121 8.13E-114 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01624 - - csv:101217243 516.538