Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01625 ATGGCTTGGTTTCTTGGCTTTCTCTTTCTCTTTTTCGTTTCTTCAGCTAATGCTTGTGATCGTTGTGTTTATCAATCTAAAGCTAGCCACCTTTATGATTCACCTACTACATATGGAGGAGCATGTGGTTATGGCAATGTGGCCTTGCAATTCTCTAATGGCTTCTTTGCAGCTGCTGTGCCTTCCCTTTATAGACAAGGAGCTGGTTGTGGCGCCTGCTATCAGGTGAGATGCAAAAACAGAAGGGTTTGTAACACAGTAGGTACTAAAGTGGTGTTGACAGATCAAAATAACGATAATGTGACAGATCTTGTCCTTAGTAAAAGAGCTTTCTTTACAATGGCTCTAAATGGCAAAGGTGCAGACCTCTTGAATCTTGGAATTGTTGATGTTGAATACAAGAGGGTGCCTTGTGAGTACAAATATAAGAATTTGTTAGTGCAAGTGGAAGAACCAAGTTATAATCCATTTTACTTGGCTATTAAATTTTTATACCAAGGTGGCCAAACAGATATAGTAGCTGTGGATATAGCTCAAGTAGGTACATCTGACTGGAGCCATATGAAGAGAAATTATGGAGCTGTTTGGGAAACTAACAACATACCTGAAGGAGCATTACAATTGAGGATGGTCGTGACTTCTGGATATGATGGAAAGTGGGTTTGGGCAAAGTCCGTACTTCCTGCTGATTGGAAAAGTGGAGCGATTTACGATACTGGAGTTCAAATCCACGATATTGCCAAAGAGAGTTGTCCACCATGGCAATGTGGTGATAAGATATGGAAATGA 789 40.56 MAWFLGFLFLFFVSSANACDRCVYQSKASHLYDSPTTYGGACGYGNVALQFSNGFFAAAVPSLYRQGAGCGACYQVRCKNRRVCNTVGTKVVLTDQNNDNVTDLVLSKRAFFTMALNGKGADLLNLGIVDVEYKRVPCEYKYKNLLVQVEEPSYNPFYLAIKFLYQGGQTDIVAVDIAQVGTSDWSHMKRNYGAVWETNNIPEGALQLRMVVTSGYDGKWVWAKSVLPADWKSGAIYDTGVQIHDIAKESCPPWQCGDKIWK 262
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 53261121 53263047 - XM_039032852.1 Bhi05g01625 35835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01625 262 Pfam Expansin C-terminal domain 147 228 IPR007117 -
Bhi05g01625 262 Pfam Lytic transglycolase 58 133 IPR009009 -
Bhi05g01625 262 PRINTS Expansin/Lol pI family signature 38 56 IPR007118 GO:0005576
Bhi05g01625 262 PRINTS Expansin/Lol pI family signature 60 78 IPR007118 GO:0005576
Bhi05g01625 262 PRINTS Expansin/Lol pI family signature 126 142 IPR007118 GO:0005576
Bhi05g01625 262 PRINTS Expansin/Lol pI family signature 185 199 IPR007118 GO:0005576
Bhi05g01625 262 PRINTS Expansin/Lol pI family signature 225 239 IPR007118 GO:0005576
Bhi05g01625 262 Gene3D - 140 244 IPR036749 -
Bhi05g01625 262 PANTHER EXPANSIN-LIKE A1-RELATED 4 257 - -
Bhi05g01625 262 SUPERFAMILY Barwin-like endoglucanases 11 141 IPR036908 -
Bhi05g01625 262 Gene3D - 13 139 IPR036908 -
Bhi05g01625 262 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 39 143 IPR007112 -
Bhi05g01625 262 PANTHER EXPANSIN-B3 4 257 - -
Bhi05g01625 262 SUPERFAMILY PHL pollen allergen 143 238 IPR036749 -
Bhi05g01625 262 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 157 239 IPR007117 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01625 Bhi-Chr5:53261121 Bhi05g01627 Bhi-Chr5:53293447 5.83E-176 dispersed
Bhi05g01624 Bhi-Chr5:53206557 Bhi05g01625 Bhi-Chr5:53261121 8.13E-114 tandem
Bhi05g01625 Bhi-Chr5:53261121 Bhi05g01626 Bhi-Chr5:53266723 1.09E-128 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01625 - - csv:101209873 515.383