Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01626 ATGGCTTGGTTTTTTACCTTTCTTCTTTTTTTTCTTCTCTCCTCCGTTAATGCTTGTGATCGTTGTATTTCTCAATCTAAAGCGGCTCATTATTACGAGGATGCCCCTACTTCATATGGAGGTGCATGTGGGTATGGAAATTTGGCCTTGGAAATGTCTCGAGGTTATTTTGCAGCTGCTGTACCTTCTCTCTACCGACAAGGAATGGGTTGTGGTGCCTGCTATCAGGTAAGATGCAAGAATGCAACATTGTGTAACACAATGGGAACCAAAATTGTTTTGACAGATCACAACTCTGATAACAGAACAGATTTTGTTCTTAGTAAAAAGGCTTTTTCAGCTATGGCTTTAAATGGGAAAGGCCAAGAACTTTTGAAAATTGGAATTGTTGATATTGAATACAAGAGGATACCTTGTGAATACAATAAAAATTTATTAATACAAGTAGTAGAATGGAGCCACAAACCATATTATTTGGCTATTAAATTCCTCTACCAAGGAGGCCAAACAGATATAACAGCGGTCAACCTAAGAGCTCAGGATGATTCTGGAGATTGGCAATACATGAAAAGAAACTATGGAGCTATTTGGGATACAAATAAAGTGCCAGAAGGGGCAATAAAGCTAGTGGTGATTGTAGTTTCAGGGTACAAAAATGGGAGAGGAATAATGATAAATTATGCACTTCCTGCTGATTGGAAAAATGGAGAGATTTATGATACTGGAATTCAAATCAAGGATATTGCTACTGAAGCTTGCAATCCTTGGAGATGTGGTGAGGAACCATGGAAATGATCAAGGTTTAATTATATATAACTTTTCACAAATATATTCAAAGTTTTAGTTACAAATAAAATGTGTGTAATTTT 869 36.36 MAWFFTFLLFFLLSSVNACDRCISQSKAAHYYEDAPTSYGGACGYGNLALEMSRGYFAAAVPSLYRQGMGCGACYQVRCKNATLCNTMGTKIVLTDHNSDNRTDFVLSKKAFSAMALNGKGQELLKIGIVDIEYKRIPCEYNKNLLIQVVEWSHKPYYLAIKFLYQGGQTDITAVNLRAQDDSGDWQYMKRNYGAIWDTNKVPEGAIKLVVIVVSGYKNGRGIMINYALPADWKNGEIYDTGIQIKDIATEACNPWRCGEEPWK 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 53266723 53269711 - XM_039032894.1 Bhi05g01626 35836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01626 264 Gene3D - 141 246 IPR036749 -
Bhi05g01626 264 Pfam Expansin C-terminal domain 153 216 IPR007117 -
Bhi05g01626 264 PANTHER EXPANSIN-B3 5 256 - -
Bhi05g01626 264 SUPERFAMILY PHL pollen allergen 150 240 IPR036749 -
Bhi05g01626 264 Gene3D - 14 140 IPR036908 -
Bhi05g01626 264 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 40 144 IPR007112 -
Bhi05g01626 264 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 157 241 IPR007117 -
Bhi05g01626 264 Pfam Lytic transglycolase 59 133 IPR009009 -
Bhi05g01626 264 SUPERFAMILY Barwin-like endoglucanases 8 143 IPR036908 -
Bhi05g01626 264 PRINTS Expansin/Lol pI family signature 39 57 IPR007118 GO:0005576
Bhi05g01626 264 PRINTS Expansin/Lol pI family signature 61 79 IPR007118 GO:0005576
Bhi05g01626 264 PRINTS Expansin/Lol pI family signature 127 143 IPR007118 GO:0005576
Bhi05g01626 264 PRINTS Expansin/Lol pI family signature 186 200 IPR007118 GO:0005576
Bhi05g01626 264 PRINTS Expansin/Lol pI family signature 227 241 IPR007118 GO:0005576
Bhi05g01626 264 PANTHER EXPANSIN-LIKE A1-RELATED 5 256 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01626 Bhi-Chr5:53266723 Bhi05g01629 Bhi-Chr5:53379624 1.85E-140 dispersed
Bhi05g01625 Bhi-Chr5:53261121 Bhi05g01626 Bhi-Chr5:53266723 1.09E-128 tandem
Bhi05g01626 Bhi-Chr5:53266723 Bhi05g01627 Bhi-Chr5:53293447 3.19E-125 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01626 - - csv:101207054 503.827