Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01629 GAAGAAAAAGAAAAATGTATTGGTTTCTCACCTTCTTCTTGCTTGTCTCCTCTACTACGGCTTCTTTTCCTCCCTGTAATCGTTGTGTTCGTCAATCCAAAGCTGCTCATTACTATGAAGATTCACCTACTTCATATGGAGGTGCTTGTGGTTATGGAAATTTGGCATTGGAAATCTCTCAAGGGTACTTTGCAGCTGCTGTCCCTTCCCTTTATAAGCGAGGAGTAGGTTGTGGCGCTTGTTATCAGGTAAGATGCAAGGACAAACGTCTATGCAATACAGCGGGGACTAAAATAGTTTTGACAGATCAAAATAATGATAATAGAACAGATATTGTTCTTAGTAAGAAAGCTTTCTCTGCAATGGCTTTAAAAGGAAAAGGTCAACAACTTTTGAATACTGGACTCATCGATGTAGAATACAAGAGGATACCTTGTGAATACAAAAACAAAAATCTGTTGGTACAAGTGGTAGAATGGAGCCACAAACCATATTATTTGGCAATCAAATTCCTATATCAAGGAGGTCAAACAGACATACAAGCGGTTAACATAGCTCAGGTTGGTTTACCAAAATGGCGGCCTATGAAAAGAAATTATGGACCCATGTGGGATATCAATAGTGTACCTGAAGGAGGATTGCAATTGAGAATGGTAATAACTTCAAGATATGATAATGGAAAATGGATTTGGGCAGGTTCTGTGCTCCCAGCTGATTGGAAAAATGGAGAAATTTATGATACTGGAGTTCAAATTAATGATATTGCTTTTGAATATTGCCCTCCTTGGCAATGTGGTGATGGACAATGGAAATAAAGAAAATAAA 825 38.06 MYWFLTFFLLVSSTTASFPPCNRCVRQSKAAHYYEDSPTSYGGACGYGNLALEISQGYFAAAVPSLYKRGVGCGACYQVRCKDKRLCNTAGTKIVLTDQNNDNRTDIVLSKKAFSAMALKGKGQQLLNTGLIDVEYKRIPCEYKNKNLLVQVVEWSHKPYYLAIKFLYQGGQTDIQAVNIAQVGLPKWRPMKRNYGPMWDINSVPEGGLQLRMVITSRYDNGKWIWAGSVLPADWKNGEIYDTGVQINDIAFEYCPPWQCGDGQWK 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 53379624 53381111 - XM_039032812.1 Bhi05g01629 35839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01629 266 Gene3D - 143 248 IPR036749 -
Bhi05g01629 266 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 160 243 IPR007117 -
Bhi05g01629 266 SUPERFAMILY PHL pollen allergen 153 242 IPR036749 -
Bhi05g01629 266 PRINTS Expansin/Lol pI family signature 41 59 IPR007118 GO:0005576
Bhi05g01629 266 PRINTS Expansin/Lol pI family signature 63 81 IPR007118 GO:0005576
Bhi05g01629 266 PRINTS Expansin/Lol pI family signature 129 145 IPR007118 GO:0005576
Bhi05g01629 266 PRINTS Expansin/Lol pI family signature 188 202 IPR007118 GO:0005576
Bhi05g01629 266 PRINTS Expansin/Lol pI family signature 229 243 IPR007118 GO:0005576
Bhi05g01629 266 PANTHER EXPANSIN-LIKE A1-RELATED 4 261 - -
Bhi05g01629 266 Gene3D - 13 142 IPR036908 -
Bhi05g01629 266 PANTHER EXPANSIN-B3 4 261 - -
Bhi05g01629 266 SUPERFAMILY Barwin-like endoglucanases 17 145 IPR036908 -
Bhi05g01629 266 Pfam Lytic transglycolase 61 136 IPR009009 -
Bhi05g01629 266 Pfam Expansin C-terminal domain 155 232 IPR007117 -
Bhi05g01629 266 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 42 146 IPR007112 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g01414 Bhi-Chr2:37664147 Bhi05g01629 Bhi-Chr5:53379624 1.13E-121 dispersed
Bhi05g01626 Bhi-Chr5:53266723 Bhi05g01629 Bhi-Chr5:53379624 1.85E-140 dispersed
Bhi05g01629 Bhi-Chr5:53379624 Bhi05g01631 Bhi-Chr5:53416600 2.08E-130 dispersed
Bhi05g01632 Bhi-Chr5:53449900 Bhi05g01629 Bhi-Chr5:53379624 4.85E-116 dispersed
Bhi05g01628 Bhi-Chr5:53304318 Bhi05g01629 Bhi-Chr5:53379624 2.81E-138 tandem
Bhi05g01629 Bhi-Chr5:53379624 Bhi05g01630 Bhi-Chr5:53407298 4.46E-133 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01629 - - csv:101209383 528.865