Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01630 ATGGCTGGGTTTCTCGGCTTTTTCTTACTCTTCTTCATTTCTTCAGCTAATGCTTATGATCGTTGTGTTCATTTTTCTAAAGCTAGTCGTTTTTTTCAATCACCTACAACGTATGGTGGAGCATGTGGTTATGGAAACTTGACATTGAAATTTTCTAAAGGCTATTTTGCTGCTGCTGTGCCTTCCCTTTACAAAGAAGGAGCTGGTTGTGGTGCATGTTATCAAGTAAGGTGCAAAAATAGAAGGCTTTGCAATACAATAGGAACTAGAGTGGTATTGACAGATCAAAATAATGATAACACAACGGATCTCGTTCTTAGCAAAAGGGCTTTTTTTACAATGGCCCTTAGTGGAAAAGGTGGAGACTTGTTGAACCTTGGAGTTGTTGATGTTGAATACAAGAGGGTACCTTGTGAGTATACAAACAAAAACTTGTTAGTGAGAGTGGAAGAATCAAGTTATAATCCATTCTACTTGGCAATAAAATTCTTGTACCAAGGTGGACAAACAGATATTGTGGCTGTGGACATAGCTCAAGTTGGTACCTCTGAATGGAGTCATATGAAAAGAAGCTATGGGGCAATATGGGAAACTAACAATGTACCTGAAGGAGCATTGCAACTAAGAATGGTGATAACTTCAGGATATGATGGGAAATGGATTTGGGCAAACTCTGTTATTCCTGTTAATTGGAAAATTGGAAGAACTTATGATACCAAAGTTCAGATCAATGACATTGCAAAGGAAAGTTGTCCACCATGGCAATGTGGAGATGGGAAGTGGAAATGA 789 38.53 MAGFLGFFLLFFISSANAYDRCVHFSKASRFFQSPTTYGGACGYGNLTLKFSKGYFAAAVPSLYKEGAGCGACYQVRCKNRRLCNTIGTRVVLTDQNNDNTTDLVLSKRAFFTMALSGKGGDLLNLGVVDVEYKRVPCEYTNKNLLVRVEESSYNPFYLAIKFLYQGGQTDIVAVDIAQVGTSEWSHMKRSYGAIWETNNVPEGALQLRMVITSGYDGKWIWANSVIPVNWKIGRTYDTKVQINDIAKESCPPWQCGDGKWK 262
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 53407298 53409359 - XM_039032837.1 Bhi05g01630 35840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01630 262 PANTHER EXPANSIN-B3 5 257 - -
Bhi05g01630 262 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 39 143 IPR007112 -
Bhi05g01630 262 Gene3D - 15 139 IPR036908 -
Bhi05g01630 262 SUPERFAMILY Barwin-like endoglucanases 16 142 IPR036908 -
Bhi05g01630 262 PRINTS Expansin/Lol pI family signature 38 56 IPR007118 GO:0005576
Bhi05g01630 262 PRINTS Expansin/Lol pI family signature 60 78 IPR007118 GO:0005576
Bhi05g01630 262 PRINTS Expansin/Lol pI family signature 126 142 IPR007118 GO:0005576
Bhi05g01630 262 PRINTS Expansin/Lol pI family signature 185 199 IPR007118 GO:0005576
Bhi05g01630 262 PRINTS Expansin/Lol pI family signature 225 239 IPR007118 GO:0005576
Bhi05g01630 262 PANTHER EXPANSIN-LIKE A1-RELATED 5 257 - -
Bhi05g01630 262 SUPERFAMILY PHL pollen allergen 143 238 IPR036749 -
Bhi05g01630 262 Pfam Lytic transglycolase 58 133 IPR009009 -
Bhi05g01630 262 Gene3D - 140 244 IPR036749 -
Bhi05g01630 262 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 157 239 IPR007117 -
Bhi05g01630 262 Pfam Expansin C-terminal domain 147 228 IPR007117 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01627 Bhi-Chr5:53293447 Bhi05g01630 Bhi-Chr5:53407298 5.35E-160 dispersed
Bhi05g01628 Bhi-Chr5:53304318 Bhi05g01630 Bhi-Chr5:53407298 4.90E-162 dispersed
Bhi05g01630 Bhi-Chr5:53407298 Bhi05g01634 Bhi-Chr5:53512229 4.39E-117 dispersed
Bhi05g01854 Bhi-Chr5:58157608 Bhi05g01630 Bhi-Chr5:53407298 1.20E-36 dispersed
Bhi05g01629 Bhi-Chr5:53379624 Bhi05g01630 Bhi-Chr5:53407298 4.46E-133 tandem
Bhi05g01630 Bhi-Chr5:53407298 Bhi05g01631 Bhi-Chr5:53416600 2.82E-130 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01630 - - csv:101209873 463.766